RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	RBAK	Q9NYW8	714 aa	Predicted RBP	18.04	■□□□□ 0.48
TOM1-210	ENST00000449058	ASIC3	Q9UHC3	531 aa		18.04	■□□□□ 0.48
TOM1-210	ENST00000449058	PSTPIP1	O43586	416 aa		18.03	■□□□□ 0.48
TOM1-210	ENST00000449058	CFH	P08603	1231 aa		18.03	■□□□□ 0.48
TOM1-210	ENST00000449058	PLCB4	Q15147	1175 aa		18.03	■□□□□ 0.48
TOM1-210	ENST00000449058	LIN9	Q5TKA1	542 aa		18.03	■□□□□ 0.48
TOM1-210	ENST00000449058	FBXW10	Q5XX13	1052 aa		18.03	■□□□□ 0.48
TOM1-210	ENST00000449058	CCDC25	Q86WR0	208 aa		18.03	■□□□□ 0.48
TOM1-210	ENST00000449058	PHF13	Q86YI8	300 aa	Predicted RBP	18.03	■□□□□ 0.48
TOM1-210	ENST00000449058	R3HDM2	Q9Y2K5	976 aa	Known RBP	18.03	■□□□□ 0.48
TOM1-210	ENST00000449058	NEU2	Q9Y3R4	380 aa		18.03	■□□□□ 0.48
TOM1-210	ENST00000449058		A0A0B4J269	797 aa		18.03	■□□□□ 0.48
TOM1-210	ENST00000449058		K7ERI5	159 aa		18.03	■□□□□ 0.48
TOM1-210	ENST00000449058	LDHA	P00338	332 aa	Known RBP	18.03	■□□□□ 0.48
TOM1-210	ENST00000449058	CLTA	P09496	248 aa		18.03	■□□□□ 0.48
TOM1-210	ENST00000449058	SLCO1A2	P46721	670 aa		18.03	■□□□□ 0.48
TOM1-210	ENST00000449058	ZBTB41	Q5SVQ8	909 aa		18.03	■□□□□ 0.48
TOM1-210	ENST00000449058	PLEKHA7	Q6IQ23	1121 aa		18.03	■□□□□ 0.48
TOM1-210	ENST00000449058	MMS22L	Q6ZRQ5	1243 aa		18.03	■□□□□ 0.48
TOM1-210	ENST00000449058	CCDC121	Q6ZUS5	278 aa		18.03	■□□□□ 0.48
TOM1-210	ENST00000449058	DEPTOR	Q8TB45	409 aa		18.03	■□□□□ 0.48
TOM1-210	ENST00000449058	CGRRF1	Q99675	332 aa		18.03	■□□□□ 0.48
TOM1-210	ENST00000449058	DDX23	Q9BUQ8	820 aa	Known RBP	18.03	■□□□□ 0.48
TOM1-210	ENST00000449058	NIFK	Q9BYG3	293 aa	Known RBP	18.03	■□□□□ 0.48
TOM1-210	ENST00000449058	OSBPL7	Q9BZF2	842 aa		18.03	■□□□□ 0.48
TOM1-210	ENST00000449058	PCDHB4	Q9Y5E5	795 aa		18.03	■□□□□ 0.48
TOM1-210	ENST00000449058	ADGRA2	Q96PE1	1338 aa		18.02	■□□□□ 0.48
TOM1-210	ENST00000449058	CNTNAP2	Q9UHC6	1331 aa		18.02	■□□□□ 0.48
TOM1-210	ENST00000449058	GAS8	O95995	478 aa		18.02	■□□□□ 0.48
TOM1-210	ENST00000449058	CHKA	P35790	457 aa		18.02	■□□□□ 0.48
TOM1-210	ENST00000449058	CAV1	Q03135	178 aa		18.02	■□□□□ 0.48
TOM1-210	ENST00000449058	MKRN4P	Q13434	485 aa	Predicted RBP	18.02	■□□□□ 0.48
TOM1-210	ENST00000449058	MAMLD1	Q13495	774 aa		18.02	■□□□□ 0.48
TOM1-210	ENST00000449058	ATL2	Q8NHH9	583 aa		18.02	■□□□□ 0.48
TOM1-210	ENST00000449058	C11orf70	Q9BRQ4	267 aa		18.02	■□□□□ 0.48
TOM1-210	ENST00000449058	MRPL47	Q9HD33	250 aa	Known RBP	18.02	■□□□□ 0.48
TOM1-210	ENST00000449058	HOMER3	Q9NSC5	361 aa		18.02	■□□□□ 0.48
TOM1-210	ENST00000449058	ADAM22	Q9P0K1	906 aa		18.02	■□□□□ 0.48
TOM1-210	ENST00000449058	FZD1	Q9UP38	647 aa		18.02	■□□□□ 0.48
TOM1-210	ENST00000449058	IGKV6D-21	A0A0A0MT36	114 aa		18.02	■□□□□ 0.47
TOM1-210	ENST00000449058	LRRIQ4	A6NIV6	560 aa		18.02	■□□□□ 0.47
TOM1-210	ENST00000449058	SPDYE16	A6NNV3	312 aa	Predicted RBP	18.02	■□□□□ 0.47
TOM1-210	ENST00000449058		O00370	1275 aa		18.02	■□□□□ 0.47
TOM1-210	ENST00000449058	TBXAS1	P24557	533 aa	Predicted RBP	18.02	■□□□□ 0.47
TOM1-210	ENST00000449058	GNA15	P30679	374 aa		18.02	■□□□□ 0.47
TOM1-210	ENST00000449058	STXBP2	Q15833	593 aa		18.02	■□□□□ 0.47
TOM1-210	ENST00000449058	TMEM270	Q6UE05	265 aa		18.02	■□□□□ 0.47
TOM1-210	ENST00000449058	RHOT1	Q8IXI2	618 aa		18.02	■□□□□ 0.47
TOM1-210	ENST00000449058	KATNAL2	Q8IYT4	538 aa		18.02	■□□□□ 0.47
TOM1-210	ENST00000449058	MSTO1	Q9BUK6	570 aa		18.02	■□□□□ 0.47
TOM1-210	ENST00000449058	TARS2	Q9BW92	718 aa	Known RBP	18.02	■□□□□ 0.47
TOM1-210	ENST00000449058	ACTR5	Q9H9F9	607 aa	Predicted RBP	18.02	■□□□□ 0.47
TOM1-210	ENST00000449058	INTS9	Q9NV88	658 aa	Known RBP	18.02	■□□□□ 0.47
TOM1-210	ENST00000449058	WDR90	Q96KV7	1748 aa		18.01	■□□□□ 0.47
TOM1-210	ENST00000449058	EDN1	P05305	212 aa		18.01	■□□□□ 0.47
TOM1-210	ENST00000449058	RALA	P11233	206 aa		18.01	■□□□□ 0.47
TOM1-210	ENST00000449058	ITGA8	P53708	1063 aa		18.01	■□□□□ 0.47
TOM1-210	ENST00000449058	TAS2R40	P59535	323 aa		18.01	■□□□□ 0.47
TOM1-210	ENST00000449058	DAB2IP	Q5VWQ8	1189 aa		18.01	■□□□□ 0.47
TOM1-210	ENST00000449058	SUGP1	Q8IWZ8	645 aa	Known RBP	18.01	■□□□□ 0.47
TOM1-210	ENST00000449058	CCDC13	Q8IYE1	715 aa		18.01	■□□□□ 0.47
TOM1-210	ENST00000449058	RBBP8NL	Q8NC74	664 aa	Predicted RBP	18.01	■□□□□ 0.47
TOM1-210	ENST00000449058	DNER	Q8NFT8	737 aa		18.01	■□□□□ 0.47
TOM1-210	ENST00000449058	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	18.01	■□□□□ 0.47
TOM1-210	ENST00000449058	SERPINB12	Q96P63	405 aa		18.01	■□□□□ 0.47
TOM1-210	ENST00000449058	JPH2	Q9BR39	696 aa	Predicted RBP	18.01	■□□□□ 0.47
TOM1-210	ENST00000449058	FBXO40	Q9UH90	709 aa		18.01	■□□□□ 0.47
TOM1-210	ENST00000449058	NUB1	Q9Y5A7	615 aa		18.01	■□□□□ 0.47
TOM1-210	ENST00000449058	HNRNPH1	P31943	449 aa	Known RBP	18.01	■□□□□ 0.47
TOM1-210	ENST00000449058	C1QBP	Q07021	282 aa	Known RBP	18.01	■□□□□ 0.47
TOM1-210	ENST00000449058	CCNG2	Q16589	344 aa		18.01	■□□□□ 0.47
TOM1-210	ENST00000449058	PRAMEF18	Q5VWM3	479 aa		18.01	■□□□□ 0.47
TOM1-210	ENST00000449058	CHADL	Q6NUI6	762 aa		18.01	■□□□□ 0.47
TOM1-210	ENST00000449058	PPP1R2P3	Q6NXS1	205 aa		18.01	■□□□□ 0.47
TOM1-210	ENST00000449058	KCNV1	Q6PIU1	500 aa		18.01	■□□□□ 0.47
TOM1-210	ENST00000449058	TAOK1	Q7L7X3	1001 aa		18.01	■□□□□ 0.47
TOM1-210	ENST00000449058	PASD1	Q8IV76	773 aa		18.01	■□□□□ 0.47
TOM1-210	ENST00000449058	SLC7A3	Q8WY07	619 aa		18.01	■□□□□ 0.47
TOM1-210	ENST00000449058	P3H4	Q92791	437 aa		18.01	■□□□□ 0.47
TOM1-210	ENST00000449058	TMEM134	Q9H6X4	195 aa		18.01	■□□□□ 0.47
TOM1-210	ENST00000449058	HOXC10	Q9NYD6	342 aa		18.01	■□□□□ 0.47
TOM1-210	ENST00000449058	SCIN	Q9Y6U3	715 aa		18.01	■□□□□ 0.47
TOM1-210	ENST00000449058	ASAP2	O43150	1006 aa		18	■□□□□ 0.47
TOM1-210	ENST00000449058	TTC4	O95801	387 aa		18	■□□□□ 0.47
TOM1-210	ENST00000449058	POTEJ	P0CG39	1038 aa		18	■□□□□ 0.47
TOM1-210	ENST00000449058	ATF2	P15336	505 aa		18	■□□□□ 0.47
TOM1-210	ENST00000449058	NOP14	P78316	857 aa	Known RBP	18	■□□□□ 0.47
TOM1-210	ENST00000449058	FSTL1	Q12841	308 aa		18	■□□□□ 0.47
TOM1-210	ENST00000449058	LACTB2	Q53H82	288 aa	Predicted RBP	18	■□□□□ 0.47
TOM1-210	ENST00000449058	EXOC3L1	Q86VI1	746 aa		18	■□□□□ 0.47
TOM1-210	ENST00000449058	UBR7	Q8N806	425 aa		18	■□□□□ 0.47
TOM1-210	ENST00000449058	OR5B17	Q8NGF7	314 aa		18	■□□□□ 0.47
TOM1-210	ENST00000449058	EXD1	Q8NHP7	514 aa		18	■□□□□ 0.47
TOM1-210	ENST00000449058	TRAIP	Q9BWF2	469 aa		18	■□□□□ 0.47
TOM1-210	ENST00000449058	ANKFY1	Q9P2R3	1169 aa		18	■□□□□ 0.47
TOM1-210	ENST00000449058	GJA3	Q9Y6H8	435 aa		18	■□□□□ 0.47
TOM1-210	ENST00000449058	ACSL3	O95573	720 aa		17.99	■□□□□ 0.47
TOM1-210	ENST00000449058	ZNF132	P52740	706 aa		17.99	■□□□□ 0.47
TOM1-210	ENST00000449058	TARBP2	Q15633	366 aa	Known RBP	17.99	■□□□□ 0.47
TOM1-210	ENST00000449058	CNGA2	Q16280	664 aa		17.99	■□□□□ 0.47

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