RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 DCXO43602 365 aa13.83□□□□□ -0.2
PRPF40A-203ENST00000448428 PAPLNO95428 1278 aa13.83□□□□□ -0.2
PRPF40A-203ENST00000448428 NFICP08651 508 aa13.83□□□□□ -0.2
PRPF40A-203ENST00000448428 ALADP13716 330 aa13.83□□□□□ -0.2
PRPF40A-203ENST00000448428 GARTP22102 1010 aa13.83□□□□□ -0.2
PRPF40A-203ENST00000448428 MCM4P33991 863 aa13.83□□□□□ -0.2
PRPF40A-203ENST00000448428 EHHADHQ08426 723 aa13.83□□□□□ -0.2
PRPF40A-203ENST00000448428 MRPL58Q14197 206 aaKnown RBP13.83□□□□□ -0.2
PRPF40A-203ENST00000448428 TMEM132DQ14C87 1099 aa13.83□□□□□ -0.2
PRPF40A-203ENST00000448428 FAM26FQ5R3K3 315 aa13.83□□□□□ -0.2
PRPF40A-203ENST00000448428 VARS2Q5ST30 1063 aaKnown RBP13.83□□□□□ -0.2
PRPF40A-203ENST00000448428 STXBP4Q6ZWJ1 553 aa13.83□□□□□ -0.2
PRPF40A-203ENST00000448428 UNC13DQ70J99 1090 aa13.83□□□□□ -0.2
PRPF40A-203ENST00000448428 EPM2AIP1Q7L775 607 aaPredicted RBP13.83□□□□□ -0.2
PRPF40A-203ENST00000448428 CEP57L1Q8IYX8 460 aa13.83□□□□□ -0.2
PRPF40A-203ENST00000448428 BEST2Q8NFU1 509 aa13.83□□□□□ -0.2
PRPF40A-203ENST00000448428 ZNF507Q8TCN5 953 aa13.83□□□□□ -0.2
PRPF40A-203ENST00000448428 ZNF707Q96C28 371 aaPredicted RBP13.83□□□□□ -0.2
PRPF40A-203ENST00000448428 SAAL1Q96ER3 474 aa13.83□□□□□ -0.2
PRPF40A-203ENST00000448428 PAGE5Q96GU1 130 aa13.83□□□□□ -0.2
PRPF40A-203ENST00000448428 CBWD1Q9BRT8 395 aa13.83□□□□□ -0.2
PRPF40A-203ENST00000448428 FAM213AQ9BRX8 229 aa13.83□□□□□ -0.2
PRPF40A-203ENST00000448428 PCIF1Q9H4Z3 704 aa13.83□□□□□ -0.2
PRPF40A-203ENST00000448428 TSHZ2Q9NRE2 1034 aa13.83□□□□□ -0.2
PRPF40A-203ENST00000448428 MUTYHQ9UIF7 546 aa13.83□□□□□ -0.2
PRPF40A-203ENST00000448428 HPSEQ9Y251 543 aa13.83□□□□□ -0.2
PRPF40A-203ENST00000448428 DERAQ9Y315 318 aa13.83□□□□□ -0.2
PRPF40A-203ENST00000448428 NR2E1Q9Y466 385 aa13.83□□□□□ -0.2
PRPF40A-203ENST00000448428 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.83□□□□□ -0.2
PRPF40A-203ENST00000448428 CDY1Q9Y6F8 540 aa13.83□□□□□ -0.2
PRPF40A-203ENST00000448428 SCN1AP35498 2009 aa13.83□□□□□ -0.2
PRPF40A-203ENST00000448428 PVALEFA0A1B0GWK0 134 aa13.82□□□□□ -0.2
PRPF40A-203ENST00000448428 GOLGA8IPA6NC78 632 aa13.82□□□□□ -0.2
PRPF40A-203ENST00000448428 GOLGA8JA6NMD2 632 aa13.82□□□□□ -0.2
PRPF40A-203ENST00000448428 C2CD4DB7Z1M9 353 aa13.82□□□□□ -0.2
PRPF40A-203ENST00000448428 PPEF2O14830 753 aa13.82□□□□□ -0.2
PRPF40A-203ENST00000448428 TBC1D4O60343 1298 aa13.82□□□□□ -0.2
PRPF40A-203ENST00000448428 ZMYND10O75800 440 aa13.82□□□□□ -0.2
PRPF40A-203ENST00000448428 LDHAP00338 332 aaKnown RBP13.82□□□□□ -0.2
PRPF40A-203ENST00000448428 WNT7BP56706 349 aa13.82□□□□□ -0.2
PRPF40A-203ENST00000448428 CYP26C1Q6V0L0 522 aa13.82□□□□□ -0.2
PRPF40A-203ENST00000448428 SMG7Q92540 1137 aaKnown RBP13.82□□□□□ -0.2
PRPF40A-203ENST00000448428 RHOBTB2Q9BYZ6 727 aa13.82□□□□□ -0.2
PRPF40A-203ENST00000448428 PRKD2Q9BZL6 878 aa13.82□□□□□ -0.2
PRPF40A-203ENST00000448428 GDPD2Q9HCC8 539 aa13.82□□□□□ -0.2
PRPF40A-203ENST00000448428 C11orf16Q9NQ32 467 aa13.82□□□□□ -0.2
PRPF40A-203ENST00000448428 ZDHHC7Q9NXF8 308 aa13.82□□□□□ -0.2
PRPF40A-203ENST00000448428 USP25Q9UHP3 1055 aa13.82□□□□□ -0.2
PRPF40A-203ENST00000448428 FBXW11Q9UKB1 542 aa13.82□□□□□ -0.2
PRPF40A-203ENST00000448428 PCDHB8Q9UN66 801 aa13.82□□□□□ -0.2
PRPF40A-203ENST00000448428 C2CD2Q9Y426 696 aa13.82□□□□□ -0.2
PRPF40A-203ENST00000448428 BDP1A6H8Y1 2624 aa13.82□□□□□ -0.2
PRPF40A-203ENST00000448428 FAM237AA0A1B0GTK4 181 aa13.81□□□□□ -0.2
PRPF40A-203ENST00000448428 ANO9A1A5B4 782 aa13.81□□□□□ -0.2
PRPF40A-203ENST00000448428 H7C4K7 107 aa13.81□□□□□ -0.2
PRPF40A-203ENST00000448428 M0QZQ0 153 aa13.81□□□□□ -0.2
PRPF40A-203ENST00000448428 PIRO00625 290 aa13.81□□□□□ -0.2
PRPF40A-203ENST00000448428 EIF3DO15371 548 aaKnown RBP eCLIP13.81□□□□□ -0.2
PRPF40A-203ENST00000448428 EXTL3O43909 919 aa13.81□□□□□ -0.2
PRPF40A-203ENST00000448428 GPR37L1O60883 481 aa13.81□□□□□ -0.2
PRPF40A-203ENST00000448428 IL18RAPO95256 599 aa13.81□□□□□ -0.2
PRPF40A-203ENST00000448428 AARSP49588 968 aaKnown RBP eCLIP13.81□□□□□ -0.2
PRPF40A-203ENST00000448428 NDUFA8P51970 172 aa13.81□□□□□ -0.2
PRPF40A-203ENST00000448428 LILRA4P59901 499 aa13.81□□□□□ -0.2
PRPF40A-203ENST00000448428 C9orf57Q5W0N0 161 aa13.81□□□□□ -0.2
PRPF40A-203ENST00000448428 SLC8B1Q6J4K2 584 aa13.81□□□□□ -0.2
PRPF40A-203ENST00000448428 EFCAB13Q8IY85 973 aa13.81□□□□□ -0.2
PRPF40A-203ENST00000448428 APPL2Q8NEU8 664 aa13.81□□□□□ -0.2
PRPF40A-203ENST00000448428 PIDD1Q9HB75 910 aa13.81□□□□□ -0.2
PRPF40A-203ENST00000448428 SLC39A2Q9NP94 309 aa13.81□□□□□ -0.2
PRPF40A-203ENST00000448428 DPP3Q9NY33 737 aa13.81□□□□□ -0.2
PRPF40A-203ENST00000448428 FBXL5Q9UKA1 691 aa13.81□□□□□ -0.2
PRPF40A-203ENST00000448428 TIMM13Q9Y5L4 95 aaPredicted RBP13.81□□□□□ -0.2
PRPF40A-203ENST00000448428 A0A1W2PQ27 194 aa13.8□□□□□ -0.2
PRPF40A-203ENST00000448428 A0A1W2PQ64 194 aa13.8□□□□□ -0.2
PRPF40A-203ENST00000448428 A0A1W2PQD8 194 aa13.8□□□□□ -0.2
PRPF40A-203ENST00000448428 FAM86C2PA6NEL3 165 aa13.8□□□□□ -0.2
PRPF40A-203ENST00000448428 TULP1O00294 542 aaPredicted RBP13.8□□□□□ -0.2
PRPF40A-203ENST00000448428 SPTLC1O15269 473 aa13.8□□□□□ -0.2
PRPF40A-203ENST00000448428 TGFB1I1O43294 461 aa13.8□□□□□ -0.2
PRPF40A-203ENST00000448428 KLRC4O43908 158 aa13.8□□□□□ -0.2
PRPF40A-203ENST00000448428 ABLIM3O94929 683 aa13.8□□□□□ -0.2
PRPF40A-203ENST00000448428 C8AP07357 584 aa13.8□□□□□ -0.2
PRPF40A-203ENST00000448428 SYKP43405 635 aa13.8□□□□□ -0.2
PRPF40A-203ENST00000448428 ARPP19P56211 112 aa13.8□□□□□ -0.2
PRPF40A-203ENST00000448428 NUCB2P80303 420 aa13.8□□□□□ -0.2
PRPF40A-203ENST00000448428 ROR1Q01973 937 aa13.8□□□□□ -0.2
PRPF40A-203ENST00000448428 UVSSAQ2YD98 709 aa13.8□□□□□ -0.2
PRPF40A-203ENST00000448428 CTXN3Q4LDR2 81 aa13.8□□□□□ -0.2
PRPF40A-203ENST00000448428 PPM1LQ5SGD2 360 aa13.8□□□□□ -0.2
PRPF40A-203ENST00000448428 ARMCX5Q6P1M9 558 aa13.8□□□□□ -0.2
PRPF40A-203ENST00000448428 DSTYKQ6XUX3 929 aa13.8□□□□□ -0.2
PRPF40A-203ENST00000448428 CCDC149Q6ZUS6 474 aa13.8□□□□□ -0.2
PRPF40A-203ENST00000448428 BRSK2Q8IWQ3 736 aa13.8□□□□□ -0.2
PRPF40A-203ENST00000448428 GPD1LQ8N335 351 aa13.8□□□□□ -0.2
PRPF40A-203ENST00000448428 FSIP1Q8NA03 581 aa13.8□□□□□ -0.2
PRPF40A-203ENST00000448428 ZNF461Q8TAF7 563 aa13.8□□□□□ -0.2
PRPF40A-203ENST00000448428 NOC3LQ8WTT2 800 aaKnown RBP13.8□□□□□ -0.2
PRPF40A-203ENST00000448428 SCFD1Q8WVM8 642 aa13.8□□□□□ -0.2
PRPF40A-203ENST00000448428 LRFN3Q9BTN0 628 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms