RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 CCDC137Q6PK04 289 aaKnown RBP20.33■□□□□ 0.85
HMGA1-205ENST00000447654 NET1Q7Z628 596 aaPredicted RBP20.33■□□□□ 0.85
HMGA1-205ENST00000447654 ZBED8Q8IZ13 594 aa20.33■□□□□ 0.85
HMGA1-205ENST00000447654 SPIRE2Q8WWL2 714 aa20.33■□□□□ 0.85
HMGA1-205ENST00000447654 TTC25Q96NG3 672 aa20.33■□□□□ 0.85
HMGA1-205ENST00000447654 PPP1R9AQ9ULJ8 1098 aa20.33■□□□□ 0.85
HMGA1-205ENST00000447654 TRAF5O00463 557 aa20.32■□□□□ 0.84
HMGA1-205ENST00000447654 RNASEH1O60930 286 aaKnown RBP20.32■□□□□ 0.84
HMGA1-205ENST00000447654 CDK4P11802 303 aa20.32■□□□□ 0.84
HMGA1-205ENST00000447654 ITIH2P19823 946 aa20.32■□□□□ 0.84
HMGA1-205ENST00000447654 NT5C2P49902 561 aa20.32■□□□□ 0.84
HMGA1-205ENST00000447654 EMP3P54852 163 aa20.32■□□□□ 0.84
HMGA1-205ENST00000447654 DNAJC3Q13217 504 aa20.32■□□□□ 0.84
HMGA1-205ENST00000447654 MED21Q13503 144 aa20.32■□□□□ 0.84
HMGA1-205ENST00000447654 TRMT5Q32P41 509 aaKnown RBP20.32■□□□□ 0.84
HMGA1-205ENST00000447654 MAP3K21Q5TCX8 1036 aa20.32■□□□□ 0.84
HMGA1-205ENST00000447654 C6orf163Q5TEZ5 329 aa20.32■□□□□ 0.84
HMGA1-205ENST00000447654 C12orf50Q8NA57 414 aaPredicted RBP20.32■□□□□ 0.84
HMGA1-205ENST00000447654 DTX3LQ8TDB6 740 aa20.32■□□□□ 0.84
HMGA1-205ENST00000447654 GAB3Q8WWW8 586 aa20.32■□□□□ 0.84
HMGA1-205ENST00000447654 HPS3Q969F9 1004 aa20.32■□□□□ 0.84
HMGA1-205ENST00000447654 ABTB1Q969K4 478 aaPredicted RBP20.32■□□□□ 0.84
HMGA1-205ENST00000447654 VAT1LQ9HCJ6 419 aa20.32■□□□□ 0.84
HMGA1-205ENST00000447654 TYW1Q9NV66 732 aaKnown RBP20.32■□□□□ 0.84
HMGA1-205ENST00000447654 EURLQ9NYK6 297 aa20.32■□□□□ 0.84
HMGA1-205ENST00000447654 TMEM247A6NEH6 219 aa20.32■□□□□ 0.84
HMGA1-205ENST00000447654 OPHN1O60890 802 aa20.32■□□□□ 0.84
HMGA1-205ENST00000447654 HAUS5O94927 633 aa20.32■□□□□ 0.84
HMGA1-205ENST00000447654 UCHL3P15374 230 aa20.32■□□□□ 0.84
HMGA1-205ENST00000447654 NFIAQ12857 509 aa20.32■□□□□ 0.84
HMGA1-205ENST00000447654 CDC16Q13042 620 aa20.32■□□□□ 0.84
HMGA1-205ENST00000447654 PTPROQ16827 1216 aa20.32■□□□□ 0.84
HMGA1-205ENST00000447654 DPY19L2P1Q6NXN4 242 aa20.32■□□□□ 0.84
HMGA1-205ENST00000447654 ZFPM1Q8IX07 1006 aa20.32■□□□□ 0.84
HMGA1-205ENST00000447654 UBL4BQ8N7F7 174 aa20.32■□□□□ 0.84
HMGA1-205ENST00000447654 FNDC8Q8TC99 324 aa20.32■□□□□ 0.84
HMGA1-205ENST00000447654 DBNDD1Q9H9R9 158 aa20.32■□□□□ 0.84
HMGA1-205ENST00000447654 ZNF287Q9HBT7 754 aa20.32■□□□□ 0.84
HMGA1-205ENST00000447654 MTUS1Q9ULD2 1270 aa20.32■□□□□ 0.84
HMGA1-205ENST00000447654 MYMKA6NI61 221 aa20.31■□□□□ 0.84
HMGA1-205ENST00000447654 ACSL3O95573 720 aa20.31■□□□□ 0.84
HMGA1-205ENST00000447654 LMNB1P20700 586 aa20.31■□□□□ 0.84
HMGA1-205ENST00000447654 GALCP54803 685 aa20.31■□□□□ 0.84
HMGA1-205ENST00000447654 ARHGAP4P98171 946 aa20.31■□□□□ 0.84
HMGA1-205ENST00000447654 RHBDF2Q6PJF5 856 aa20.31■□□□□ 0.84
HMGA1-205ENST00000447654 ERMNQ8TAM6 284 aa20.31■□□□□ 0.84
HMGA1-205ENST00000447654 FAM81BQ96LP2 452 aa20.31■□□□□ 0.84
HMGA1-205ENST00000447654 NAALADL1Q9UQQ1 740 aa20.31■□□□□ 0.84
HMGA1-205ENST00000447654 FRMPD2Q68DX3 1309 aaPredicted RBP20.31■□□□□ 0.84
HMGA1-205ENST00000447654 hCG_2014768A0A024R1R8 64 aa20.31■□□□□ 0.84
HMGA1-205ENST00000447654 TPD52L2O43399 206 aaKnown RBP20.31■□□□□ 0.84
HMGA1-205ENST00000447654 FKBP6O75344 327 aa20.31■□□□□ 0.84
HMGA1-205ENST00000447654 ALOX15P16050 662 aaPredicted RBP20.31■□□□□ 0.84
HMGA1-205ENST00000447654 HOXD12P35452 270 aa20.31■□□□□ 0.84
HMGA1-205ENST00000447654 COILP38432 576 aaPredicted RBP20.31■□□□□ 0.84
HMGA1-205ENST00000447654 RPL5P46777 297 aaKnown RBP20.31■□□□□ 0.84
HMGA1-205ENST00000447654 MTTPP55157 894 aa20.31■□□□□ 0.84
HMGA1-205ENST00000447654 THOC5Q13769 683 aaKnown RBP20.31■□□□□ 0.84
HMGA1-205ENST00000447654 PDCD4Q53EL6 469 aaKnown RBP20.31■□□□□ 0.84
HMGA1-205ENST00000447654 APOBEC3HQ6NTF7 200 aaKnown RBP20.31■□□□□ 0.84
HMGA1-205ENST00000447654 PPP4R3CPQ6ZMV5 832 aa20.31■□□□□ 0.84
HMGA1-205ENST00000447654 SYDE1Q6ZW31 735 aaPredicted RBP20.31■□□□□ 0.84
HMGA1-205ENST00000447654 SRRM1Q8IYB3 904 aaKnown RBP20.31■□□□□ 0.84
HMGA1-205ENST00000447654 LRRC47Q8N1G4 583 aaKnown RBP20.31■□□□□ 0.84
HMGA1-205ENST00000447654 SLC35G2Q8TBE7 412 aa20.31■□□□□ 0.84
HMGA1-205ENST00000447654 NMD3Q96D46 503 aaKnown RBP20.31■□□□□ 0.84
HMGA1-205ENST00000447654 PIGSQ96S52 555 aa20.31■□□□□ 0.84
HMGA1-205ENST00000447654 AAASQ9NRG9 546 aa20.31■□□□□ 0.84
HMGA1-205ENST00000447654 PLK2Q9NYY3 685 aa20.31■□□□□ 0.84
HMGA1-205ENST00000447654 KANSL1LA0AUZ9 987 aa20.3■□□□□ 0.84
HMGA1-205ENST00000447654 GTF2H1P32780 548 aa20.3■□□□□ 0.84
HMGA1-205ENST00000447654 PLCB3Q01970 1234 aa20.3■□□□□ 0.84
HMGA1-205ENST00000447654 TMCO4Q5TGY1 634 aa20.3■□□□□ 0.84
HMGA1-205ENST00000447654 CDC42EP5Q6NZY7 148 aa20.3■□□□□ 0.84
HMGA1-205ENST00000447654 C1orf228Q6PIY5 440 aa20.3■□□□□ 0.84
HMGA1-205ENST00000447654 MTDHQ86UE4 582 aaKnown RBP20.3■□□□□ 0.84
HMGA1-205ENST00000447654 CCDC25Q86WR0 208 aa20.3■□□□□ 0.84
HMGA1-205ENST00000447654 RELL1Q8IUW5 271 aa20.3■□□□□ 0.84
HMGA1-205ENST00000447654 DQX1Q8TE96 717 aaKnown RBP20.3■□□□□ 0.84
HMGA1-205ENST00000447654 DDX12PQ92771 950 aa20.3■□□□□ 0.84
HMGA1-205ENST00000447654 PRICKLE1Q96MT3 831 aaPredicted RBP20.3■□□□□ 0.84
HMGA1-205ENST00000447654 SIKE1Q9BRV8 207 aa20.3■□□□□ 0.84
HMGA1-205ENST00000447654 MTMR4Q9NYA4 1195 aa20.3■□□□□ 0.84
HMGA1-205ENST00000447654 THEGQ9P2T0 379 aa20.3■□□□□ 0.84
HMGA1-205ENST00000447654 ZMYM2Q9UBW7 1377 aa20.3■□□□□ 0.84
HMGA1-205ENST00000447654 QSER1Q2KHR3 1735 aa20.3■□□□□ 0.84
HMGA1-205ENST00000447654 TCEAL1Q15170 157 aa20.29■□□□□ 0.84
HMGA1-205ENST00000447654 AAGABQ6PD74 315 aa20.29■□□□□ 0.84
HMGA1-205ENST00000447654 MIGA2Q7L4E1 593 aa20.29■□□□□ 0.84
HMGA1-205ENST00000447654 SLC15A3Q8IY34 581 aa20.29■□□□□ 0.84
HMGA1-205ENST00000447654 ATP11CQ8NB49 1132 aa20.29■□□□□ 0.84
HMGA1-205ENST00000447654 SLC30A5Q8TAD4 765 aa20.29■□□□□ 0.84
HMGA1-205ENST00000447654 MORC4Q8TE76 937 aa20.29■□□□□ 0.84
HMGA1-205ENST00000447654 LARP4BQ92615 738 aaKnown RBP20.29■□□□□ 0.84
HMGA1-205ENST00000447654 MASTLQ96GX5 879 aa20.29■□□□□ 0.84
HMGA1-205ENST00000447654 ABHD8Q96I13 439 aa20.29■□□□□ 0.84
HMGA1-205ENST00000447654 WASF2Q9Y6W5 498 aa20.29■□□□□ 0.84
HMGA1-205ENST00000447654 A0A1W2PRG0 241 aa20.29■□□□□ 0.84
HMGA1-205ENST00000447654 ARHGAP10A1A4S6 786 aa20.29■□□□□ 0.84
HMGA1-205ENST00000447654 VILLO15195 856 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms