RNA–Protein interactions for RNA: ENST00000447310.5

ZNF550-204, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 4,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-204ENST00000447310 FOXP3Q9BZS1 431 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 RANBP17Q9H2T7 1088 aaKnown RBP11.85□□□□□ -0.51
ZNF550-204ENST00000447310 ZFATQ9P243 1243 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 HEY2Q9UBP5 337 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 APOBEC2Q9Y235 224 aaKnown RBP11.85□□□□□ -0.51
ZNF550-204ENST00000447310 GJA3Q9Y6H8 435 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 ASTN1O14525 1302 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 SPATA31A1Q5TZJ5 1347 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 TISP43B9A030 160 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 MMP13P45452 471 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 ASPHQ12797 758 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 RC3H1Q5TC82 1133 aaKnown RBP11.85□□□□□ -0.51
ZNF550-204ENST00000447310 LRRC57Q8N9N7 239 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 CCT6BQ92526 530 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 ANKRD36BP1Q96IX9 119 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 THTPAQ9BU02 230 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 KCNH7Q9NS40 1196 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 TRIM33Q9UPN9 1127 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 HNRNPCL1O60812 293 aaKnown RBP11.85□□□□□ -0.51
ZNF550-204ENST00000447310 SLITRK3O94933 977 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 LDHAP00338 332 aaKnown RBP11.85□□□□□ -0.51
ZNF550-204ENST00000447310 ASNSP08243 561 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 SHMT1P34896 483 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 Q4G0T1 1027 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 ZCWPW2Q504Y3 356 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 MIS18BP1Q6P0N0 1132 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 TEKT4Q8WW24 435 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 SCYL1Q96KG9 808 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 DDX4Q9NQI0 724 aaKnown RBP11.85□□□□□ -0.51
ZNF550-204ENST00000447310 SMYD2Q9NRG4 433 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 TOPORSQ9NS56 1045 aaPredicted RBP11.85□□□□□ -0.51
ZNF550-204ENST00000447310 LRRC4BQ9NT99 713 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 CAPN9O14815 690 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 HLA-DRAP01903 254 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 KRT7P08729 469 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 TBXAS1P24557 533 aaPredicted RBP11.85□□□□□ -0.51
ZNF550-204ENST00000447310 ALDH18A1P54886 795 aaKnown RBP11.85□□□□□ -0.51
ZNF550-204ENST00000447310 RRP1BQ14684 758 aaKnown RBP11.85□□□□□ -0.51
ZNF550-204ENST00000447310 TAF1BQ53T94 588 aaPredicted RBP11.85□□□□□ -0.51
ZNF550-204ENST00000447310 SPDYCQ5MJ68 293 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 SH2D4BQ5SQS7 431 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.85□□□□□ -0.51
ZNF550-204ENST00000447310 KCTD17Q8N5Z5 321 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 RBBP8NLQ8NC74 664 aaPredicted RBP11.85□□□□□ -0.51
ZNF550-204ENST00000447310 CCNYQ8ND76 341 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 NINJ2Q9NZG7 142 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 PCDHA3Q9Y5H8 950 aa11.85□□□□□ -0.51
ZNF550-204ENST00000447310 MED7O43513 233 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 CBX6O95503 412 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 UBTFL6P0CB48 400 aaPredicted RBP11.84□□□□□ -0.51
ZNF550-204ENST00000447310 CCND2P30279 289 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 DRG2P55039 364 aaKnown RBP11.84□□□□□ -0.51
ZNF550-204ENST00000447310 SMTNL2Q2TAL5 461 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 HHIPL2Q6UWX4 724 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 EP400NLQ6ZTU2 488 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 NOP9Q86U38 636 aaKnown RBP11.84□□□□□ -0.51
ZNF550-204ENST00000447310 LRRC15Q8TF66 581 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 ACAP3Q96P50 834 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 KLC2Q9H0B6 622 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 POLR3FQ9H1D9 316 aaPredicted RBP11.84□□□□□ -0.51
ZNF550-204ENST00000447310 MANSC1Q9H8J5 431 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 KCNMB3Q9NPA1 279 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 SLC12A6Q9UHW9 1150 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 H3BRJ5 948 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 APBA3O96018 575 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 VHLP40337 213 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 MARSP56192 900 aaKnown RBP11.84□□□□□ -0.51
ZNF550-204ENST00000447310 EIF3EP60228 445 aaKnown RBP11.84□□□□□ -0.51
ZNF550-204ENST00000447310 RABGAP1LQ5R372 815 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 EEPD1Q7L9B9 569 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 NSL1Q96IY1 281 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 HEXIM2Q96MH2 286 aaKnown RBP11.84□□□□□ -0.51
ZNF550-204ENST00000447310 PWWP2AQ96N64 755 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 RIT2Q99578 217 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 NUF2Q9BZD4 464 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 MIS12Q9H081 205 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 FBXO28Q9NVF7 368 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 FEM1BQ9UK73 627 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 PCDHA10Q9Y5I2 948 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 F5H423 210 aaPredicted RBP11.84□□□□□ -0.51
ZNF550-204ENST00000447310 CASQ2O14958 399 aaPredicted RBP11.84□□□□□ -0.51
ZNF550-204ENST00000447310 PPP1R12AO14974 1030 aaPredicted RBP11.84□□□□□ -0.51
ZNF550-204ENST00000447310 ECE2O60344 883 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 NOL3O60936 208 aaKnown RBP11.84□□□□□ -0.51
ZNF550-204ENST00000447310 EPHB2P29323 1055 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 SERPINB4P48594 390 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 DLG4P78352 724 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 SATB1Q01826 763 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 THOC5Q13769 683 aaKnown RBP11.84□□□□□ -0.51
ZNF550-204ENST00000447310 TFDP2Q14188 446 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 HSP90AA5PQ58FG0 334 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 CRELD2Q6UXH1 353 aaPredicted RBP11.84□□□□□ -0.51
ZNF550-204ENST00000447310 RASSF3Q86WH2 238 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 MXRA8Q9BRK3 442 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 ADPGKQ9BRR6 497 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 METTL5Q9NRN9 209 aaKnown RBP11.84□□□□□ -0.51
ZNF550-204ENST00000447310 MCM8Q9UJA3 840 aa11.84□□□□□ -0.51
ZNF550-204ENST00000447310 CST8O60676 142 aa11.83□□□□□ -0.52
ZNF550-204ENST00000447310 RASSF9O75901 435 aa11.83□□□□□ -0.52
ZNF550-204ENST00000447310 MMP10P09238 476 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms