RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 GNAT2P19087 354 aa7.26□□□□□ -1.25
BRAFP1-201ENST00000445336 MCCP23508 829 aa7.26□□□□□ -1.25
BRAFP1-201ENST00000445336 PGM5Q15124 567 aa7.26□□□□□ -1.25
BRAFP1-201ENST00000445336 CRY1Q16526 586 aa7.26□□□□□ -1.25
BRAFP1-201ENST00000445336 SLC9C2Q5TAH2 1124 aa7.26□□□□□ -1.25
BRAFP1-201ENST00000445336 PALB2Q86YC2 1186 aa7.26□□□□□ -1.25
BRAFP1-201ENST00000445336 KIAA0319LQ8IZA0 1049 aa7.26□□□□□ -1.25
BRAFP1-201ENST00000445336 MDGA1Q8NFP4 955 aa7.26□□□□□ -1.25
BRAFP1-201ENST00000445336 EPAS1Q99814 870 aa7.26□□□□□ -1.25
BRAFP1-201ENST00000445336 FAM49AQ9H0Q0 323 aaPredicted RBP7.26□□□□□ -1.25
BRAFP1-201ENST00000445336 ITPR2Q14571 2701 aa7.26□□□□□ -1.25
BRAFP1-201ENST00000445336 TSPY3P0CV98 308 aa7.25□□□□□ -1.25
BRAFP1-201ENST00000445336 TSPY8P0CW00 308 aa7.25□□□□□ -1.25
BRAFP1-201ENST00000445336 ACP1P24666 158 aa7.25□□□□□ -1.25
BRAFP1-201ENST00000445336 PLD1Q13393 1074 aa7.25□□□□□ -1.25
BRAFP1-201ENST00000445336 PDZD4Q76G19 769 aaPredicted RBP7.25□□□□□ -1.25
BRAFP1-201ENST00000445336 NLRX1Q86UT6 975 aa7.25□□□□□ -1.25
BRAFP1-201ENST00000445336 MCEMP1Q8IX19 187 aa7.25□□□□□ -1.25
BRAFP1-201ENST00000445336 ELMOD1Q8N336 334 aa7.25□□□□□ -1.25
BRAFP1-201ENST00000445336 LRRCC1Q9C099 1032 aa7.25□□□□□ -1.25
BRAFP1-201ENST00000445336 PCDHGA7Q9Y5G6 932 aa7.25□□□□□ -1.25
BRAFP1-201ENST00000445336 SERINC4A6NH21 518 aa7.25□□□□□ -1.25
BRAFP1-201ENST00000445336 MAFGO15525 162 aa7.25□□□□□ -1.25
BRAFP1-201ENST00000445336 HBP1O60381 514 aa7.25□□□□□ -1.25
BRAFP1-201ENST00000445336 CHMLP26374 656 aa7.25□□□□□ -1.25
BRAFP1-201ENST00000445336 CSTF2P33240 577 aaKnown RBP eCLIP7.25□□□□□ -1.25
BRAFP1-201ENST00000445336 PPP1R26Q5T8A7 1209 aaPredicted RBP7.25□□□□□ -1.25
BRAFP1-201ENST00000445336 EMC10Q5UCC4 262 aa7.25□□□□□ -1.25
BRAFP1-201ENST00000445336 MARCH9Q86YJ5 346 aa7.25□□□□□ -1.25
BRAFP1-201ENST00000445336 ZSCAN18Q8TBC5 510 aaPredicted RBP7.25□□□□□ -1.25
BRAFP1-201ENST00000445336 CD101Q93033 1021 aa7.25□□□□□ -1.25
BRAFP1-201ENST00000445336 DBNDD2Q9BQY9 259 aa7.25□□□□□ -1.25
BRAFP1-201ENST00000445336 COL20A1Q9P218 1284 aa7.25□□□□□ -1.25
BRAFP1-201ENST00000445336 MAGEB2O15479 319 aa7.24□□□□□ -1.25
BRAFP1-201ENST00000445336 EFSO43281 561 aa7.24□□□□□ -1.25
BRAFP1-201ENST00000445336 GRID2O43424 1007 aa7.24□□□□□ -1.25
BRAFP1-201ENST00000445336 SNHG28P0DPA3 235 aa7.24□□□□□ -1.25
BRAFP1-201ENST00000445336 FXR2P51116 673 aaKnown RBP eCLIP7.24□□□□□ -1.25
BRAFP1-201ENST00000445336 TNK2Q07912 1038 aa7.24□□□□□ -1.25
BRAFP1-201ENST00000445336 TMEM266Q2M3C6 531 aa7.24□□□□□ -1.25
BRAFP1-201ENST00000445336 FUT10Q6P4F1 479 aa7.24□□□□□ -1.25
BRAFP1-201ENST00000445336 KCTD1Q719H9 257 aa7.24□□□□□ -1.25
BRAFP1-201ENST00000445336 TRMT11Q7Z4G4 463 aaKnown RBP7.24□□□□□ -1.25
BRAFP1-201ENST00000445336 SLC7A14Q8TBB6 771 aa7.24□□□□□ -1.25
BRAFP1-201ENST00000445336 TMEM40Q8WWA1 233 aa7.24□□□□□ -1.25
BRAFP1-201ENST00000445336 ING5Q8WYH8 240 aa7.24□□□□□ -1.25
BRAFP1-201ENST00000445336 USP29Q9HBJ7 922 aa7.24□□□□□ -1.25
BRAFP1-201ENST00000445336 ISY1Q9ULR0 285 aaKnown RBP7.24□□□□□ -1.25
BRAFP1-201ENST00000445336 SF3B1O75533 1304 aaKnown RBP eCLIP7.24□□□□□ -1.25
BRAFP1-201ENST00000445336 LOC400499M0QZD8 3231 aa7.24□□□□□ -1.25
BRAFP1-201ENST00000445336 LAD1O00515 517 aa7.24□□□□□ -1.25
BRAFP1-201ENST00000445336 ADD2P35612 726 aa7.24□□□□□ -1.25
BRAFP1-201ENST00000445336 TCF7P36402 384 aaPredicted RBP7.24□□□□□ -1.25
BRAFP1-201ENST00000445336 ADAM9Q13443 819 aa7.24□□□□□ -1.25
BRAFP1-201ENST00000445336 RUNX3Q13761 415 aa7.24□□□□□ -1.25
BRAFP1-201ENST00000445336 HLA-BQ31612 363 aa7.24□□□□□ -1.25
BRAFP1-201ENST00000445336 PLEKHM2Q8IWE5 1019 aa7.24□□□□□ -1.25
BRAFP1-201ENST00000445336 TCEAL8Q8IYN2 117 aa7.24□□□□□ -1.25
BRAFP1-201ENST00000445336 BPIFB1Q8TDL5 484 aa7.24□□□□□ -1.25
BRAFP1-201ENST00000445336 GPRASP2Q96D09 838 aa7.24□□□□□ -1.25
BRAFP1-201ENST00000445336 HIVEP3Q5T1R4 2406 aa7.24□□□□□ -1.25
BRAFP1-201ENST00000445336 ABCA7Q8IZY2 2146 aa7.24□□□□□ -1.25
BRAFP1-201ENST00000445336 RNF113AO15541 343 aaKnown RBP7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 DHX15O43143 795 aaKnown RBP7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 TSPAN3O60637 253 aa7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 MOSPD3O75425 235 aa7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 MT-CO3P00414 261 aa7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 EIF2AK2P19525 551 aaKnown RBP7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 RBMS1P29558 406 aaKnown RBP7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 LEPRP48357 1165 aaKnown RBP7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 CDR1P51861 262 aa7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 YBX1P67809 324 aaKnown RBP7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 RPL6Q02878 288 aaKnown RBP7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 ORC1Q13415 861 aa7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 CNGB1Q14028 1251 aaPredicted RBP7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 ZNF268Q14587 947 aaPredicted RBP7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 TEAD4Q15561 434 aa7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 UTP14CQ5TAP6 766 aaKnown RBP7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 TEX2Q8IWB9 1127 aa7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 NSUN7Q8NE18 718 aaKnown RBP7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 CHDHQ8NE62 594 aaPredicted RBP7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 FAM83CQ9BQN1 747 aa7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 WDR70Q9NW82 654 aa7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 DNAJB4Q9UDY4 337 aa7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 PLAAQ9Y263 795 aa7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 TDRD15B5MCY1 1934 aaKnown RBP7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 TLN1Q9Y490 2541 aaKnown RBP7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 A0A0A0MRY4 1105 aa7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 SRGAP3O43295 1099 aa7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 REC8O95072 547 aa7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 MBD4O95243 580 aa7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 SSBP05455 408 aaKnown RBP eCLIP7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 TOP1P11387 765 aaKnown RBP7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 EIF4BP23588 611 aaKnown RBP7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 SSTR2P30874 369 aa7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 GABREP78334 506 aa7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 SF3A1Q15459 793 aaKnown RBP7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 USP49Q70CQ1 688 aa7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 CCDC82Q8N4S0 544 aa7.23□□□□□ -1.25
BRAFP1-201ENST00000445336 CPA6Q8N4T0 437 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms