RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 CHAMP1Q96JM3 812 aa11.84□□□□□ -0.51
SF3A1-203ENST00000444440 FAM84AQ96KN4 292 aa11.84□□□□□ -0.51
SF3A1-203ENST00000444440 SUSD3Q96L08 255 aa11.84□□□□□ -0.51
SF3A1-203ENST00000444440 MSTO1Q9BUK6 570 aa11.84□□□□□ -0.51
SF3A1-203ENST00000444440 ST6GALNAC4Q9H4F1 302 aa11.84□□□□□ -0.51
SF3A1-203ENST00000444440 PLEKHA5Q9HAU0 1116 aa11.84□□□□□ -0.51
SF3A1-203ENST00000444440 DAXXQ9UER7 740 aaPredicted RBP11.84□□□□□ -0.51
SF3A1-203ENST00000444440 CCDC39Q9UFE4 941 aa11.84□□□□□ -0.51
SF3A1-203ENST00000444440 KCNG1Q9UIX4 513 aa11.84□□□□□ -0.51
SF3A1-203ENST00000444440 BACE2Q9Y5Z0 518 aa11.84□□□□□ -0.51
SF3A1-203ENST00000444440 FANCMQ8IYD8 2048 aa11.83□□□□□ -0.52
SF3A1-203ENST00000444440 SPTLC2O15270 562 aa11.83□□□□□ -0.52
SF3A1-203ENST00000444440 ABLIM3O94929 683 aa11.83□□□□□ -0.52
SF3A1-203ENST00000444440 SEC24AO95486 1093 aa11.83□□□□□ -0.52
SF3A1-203ENST00000444440 VNN2O95498 520 aa11.83□□□□□ -0.52
SF3A1-203ENST00000444440 F13A1P00488 732 aa11.83□□□□□ -0.52
SF3A1-203ENST00000444440 ZSCAN22P10073 491 aaPredicted RBP11.83□□□□□ -0.52
SF3A1-203ENST00000444440 MCM4P33991 863 aa11.83□□□□□ -0.52
SF3A1-203ENST00000444440 STAT6P42226 847 aa11.83□□□□□ -0.52
SF3A1-203ENST00000444440 AARSP49588 968 aaKnown RBP eCLIP11.83□□□□□ -0.52
SF3A1-203ENST00000444440 PPP2R3AQ06190 1150 aa11.83□□□□□ -0.52
SF3A1-203ENST00000444440 STK38Q15208 465 aa11.83□□□□□ -0.52
SF3A1-203ENST00000444440 PPM1LQ5SGD2 360 aa11.83□□□□□ -0.52
SF3A1-203ENST00000444440 SHC4Q6S5L8 630 aa11.83□□□□□ -0.52
SF3A1-203ENST00000444440 CYP26C1Q6V0L0 522 aa11.83□□□□□ -0.52
SF3A1-203ENST00000444440 ANKS3Q6ZW76 656 aa11.83□□□□□ -0.52
SF3A1-203ENST00000444440 SV2BQ7L1I2 683 aa11.83□□□□□ -0.52
SF3A1-203ENST00000444440 EFCAB13Q8IY85 973 aa11.83□□□□□ -0.52
SF3A1-203ENST00000444440 ITFG1Q8TB96 612 aa11.83□□□□□ -0.52
SF3A1-203ENST00000444440 FAM122AQ96E09 287 aa11.83□□□□□ -0.52
SF3A1-203ENST00000444440 FAM212AQ96EL1 285 aa11.83□□□□□ -0.52
SF3A1-203ENST00000444440 RPP25Q9BUL9 199 aaKnown RBP11.83□□□□□ -0.52
SF3A1-203ENST00000444440 RPF1Q9H9Y2 349 aaKnown RBP11.83□□□□□ -0.52
SF3A1-203ENST00000444440 PIDD1Q9HB75 910 aa11.83□□□□□ -0.52
SF3A1-203ENST00000444440 EPS15L1Q9UBC2 864 aa11.83□□□□□ -0.52
SF3A1-203ENST00000444440 DNMT3BQ9UBC3 853 aaKnown RBP11.83□□□□□ -0.52
SF3A1-203ENST00000444440 DPP7Q9UHL4 492 aa11.83□□□□□ -0.52
SF3A1-203ENST00000444440 FBXL5Q9UKA1 691 aa11.83□□□□□ -0.52
SF3A1-203ENST00000444440 ARIH1Q9Y4X5 557 aaPredicted RBP11.83□□□□□ -0.52
SF3A1-203ENST00000444440 TIMM13Q9Y5L4 95 aaPredicted RBP11.83□□□□□ -0.52
SF3A1-203ENST00000444440 STYXL1Q9Y6J8 313 aa11.83□□□□□ -0.52
SF3A1-203ENST00000444440 M0QZQ0 153 aa11.82□□□□□ -0.52
SF3A1-203ENST00000444440 SYN3O14994 580 aa11.82□□□□□ -0.52
SF3A1-203ENST00000444440 SPTLC1O15269 473 aa11.82□□□□□ -0.52
SF3A1-203ENST00000444440 TRAPPC3O43617 180 aa11.82□□□□□ -0.52
SF3A1-203ENST00000444440 PPP6R2O75170 966 aa11.82□□□□□ -0.52
SF3A1-203ENST00000444440 HNRNPA1P09651 372 aaKnown RBP eCLIP11.82□□□□□ -0.52
SF3A1-203ENST00000444440 OR4Q2P0C623 313 aa11.82□□□□□ -0.52
SF3A1-203ENST00000444440 CASP1P29466 404 aa11.82□□□□□ -0.52
SF3A1-203ENST00000444440 HOXA9P31269 272 aa11.82□□□□□ -0.52
SF3A1-203ENST00000444440 ARPP19P56211 112 aa11.82□□□□□ -0.52
SF3A1-203ENST00000444440 TDGQ13569 410 aa11.82□□□□□ -0.52
SF3A1-203ENST00000444440 SLC5A9Q2M3M2 681 aa11.82□□□□□ -0.52
SF3A1-203ENST00000444440 LIN9Q5TKA1 542 aa11.82□□□□□ -0.52
SF3A1-203ENST00000444440 SPATA1Q5VX52 437 aa11.82□□□□□ -0.52
SF3A1-203ENST00000444440 PDXDC1Q6P996 788 aa11.82□□□□□ -0.52
SF3A1-203ENST00000444440 CCDC73Q6ZRK6 1079 aa11.82□□□□□ -0.52
SF3A1-203ENST00000444440 UBALD2Q8IYN6 164 aa11.82□□□□□ -0.52
SF3A1-203ENST00000444440 MFSD14AQ96MC6 490 aa11.82□□□□□ -0.52
SF3A1-203ENST00000444440 PHOX2BQ99453 314 aa11.82□□□□□ -0.52
SF3A1-203ENST00000444440 CRISPLD1Q9H336 500 aa11.82□□□□□ -0.52
SF3A1-203ENST00000444440 MRPL44Q9H9J2 332 aaKnown RBP11.82□□□□□ -0.52
SF3A1-203ENST00000444440 UBQLN1Q9UMX0 589 aaKnown RBP11.82□□□□□ -0.52
SF3A1-203ENST00000444440 PCDHB8Q9UN66 801 aa11.82□□□□□ -0.52
SF3A1-203ENST00000444440 POLIQ9UNA4 740 aa11.82□□□□□ -0.52
SF3A1-203ENST00000444440 DUSP12Q9UNI6 340 aa11.82□□□□□ -0.52
SF3A1-203ENST00000444440 NUB1Q9Y5A7 615 aa11.82□□□□□ -0.52
SF3A1-203ENST00000444440 ANHXE9PGG2 379 aa11.81□□□□□ -0.52
SF3A1-203ENST00000444440 PRPF6O94906 941 aaKnown RBP11.81□□□□□ -0.52
SF3A1-203ENST00000444440 GCNT3O95395 438 aa11.81□□□□□ -0.52
SF3A1-203ENST00000444440 YEATS4O95619 227 aa11.81□□□□□ -0.52
SF3A1-203ENST00000444440 LAMP2P13473 410 aa11.81□□□□□ -0.52
SF3A1-203ENST00000444440 IDEP14735 1019 aa11.81□□□□□ -0.52
SF3A1-203ENST00000444440 CYP3A5P20815 502 aa11.81□□□□□ -0.52
SF3A1-203ENST00000444440 FSHRP23945 695 aa11.81□□□□□ -0.52
SF3A1-203ENST00000444440 HOXD13P35453 343 aa11.81□□□□□ -0.52
SF3A1-203ENST00000444440 TXLNAP40222 546 aa11.81□□□□□ -0.52
SF3A1-203ENST00000444440 CDR1P51861 262 aa11.81□□□□□ -0.52
SF3A1-203ENST00000444440 TCF15Q12870 199 aa11.81□□□□□ -0.52
SF3A1-203ENST00000444440 HTR4Q13639 388 aa11.81□□□□□ -0.52
SF3A1-203ENST00000444440 CTXN3Q4LDR2 81 aa11.81□□□□□ -0.52
SF3A1-203ENST00000444440 L1TD1Q5T7N2 865 aaKnown RBP11.81□□□□□ -0.52
SF3A1-203ENST00000444440 C9orf57Q5W0N0 161 aa11.81□□□□□ -0.52
SF3A1-203ENST00000444440 CWF19L1Q69YN2 538 aaKnown RBP11.81□□□□□ -0.52
SF3A1-203ENST00000444440 ADALQ6DHV7 355 aa11.81□□□□□ -0.52
SF3A1-203ENST00000444440 ELMSAN1Q6PJG2 1045 aa11.81□□□□□ -0.52
SF3A1-203ENST00000444440 RNF19BQ6ZMZ0 732 aa11.81□□□□□ -0.52
SF3A1-203ENST00000444440 TMEM105Q8N8V8 129 aa11.81□□□□□ -0.52
SF3A1-203ENST00000444440 ZNF461Q8TAF7 563 aa11.81□□□□□ -0.52
SF3A1-203ENST00000444440 FGF14Q92915 247 aa11.81□□□□□ -0.52
SF3A1-203ENST00000444440 HVCN1Q96D96 273 aa11.81□□□□□ -0.52
SF3A1-203ENST00000444440 SAAL1Q96ER3 474 aa11.81□□□□□ -0.52
SF3A1-203ENST00000444440 TMEM209Q96SK2 561 aa11.81□□□□□ -0.52
SF3A1-203ENST00000444440 OLFML3Q9NRN5 406 aa11.81□□□□□ -0.52
SF3A1-203ENST00000444440 PANK4Q9NVE7 773 aa11.81□□□□□ -0.52
SF3A1-203ENST00000444440 SEL1LQ9UBV2 794 aa11.81□□□□□ -0.52
SF3A1-203ENST00000444440 AGO2Q9UKV8 859 aaKnown RBP11.81□□□□□ -0.52
SF3A1-203ENST00000444440 HELZP42694 1942 aaKnown RBP11.81□□□□□ -0.52
SF3A1-203ENST00000444440 MYH10P35580 1976 aa11.8□□□□□ -0.52
SF3A1-203ENST00000444440 ANO9A1A5B4 782 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms