RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 SUSD3Q96L08 255 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 ZNF560Q96MR9 790 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 UBE2ZQ9H832 354 aaPredicted RBP11.72□□□□□ -0.53
HDAC6-211ENST00000443563 RXFP1Q9HBX9 757 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 KIAA1468Q9P260 1216 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 MAN1B1Q9UKM7 699 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 ITGA11Q9UKX5 1188 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 PCDHGC5Q9Y5F6 944 aa11.72□□□□□ -0.53
HDAC6-211ENST00000443563 VWA8A3KMH1 1905 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 ANO9A1A5B4 782 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 H7C4K7 107 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 PIRO00625 290 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 PSMA7O14818 248 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 PER2O15055 1255 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 MAPK13O15264 365 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 FGFR3P22607 806 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 NR2F2P24468 414 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 PRCPP42785 496 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 AP3M2P53677 418 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 LRRC63Q05C16 580 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 PSMD5Q16401 504 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 CAMK4Q16566 473 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 PUS10Q3MIT2 529 aaKnown RBP11.71□□□□□ -0.53
HDAC6-211ENST00000443563 SV2CQ496J9 727 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 C9orf57Q5W0N0 161 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 CENPPQ6IPU0 288 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 DSTYKQ6XUX3 929 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 TMEM184AQ6ZMB5 413 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 ANKS3Q6ZW76 656 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 EFCAB13Q8IY85 973 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 SMYD4Q8IYR2 804 aaPredicted RBP11.71□□□□□ -0.53
HDAC6-211ENST00000443563 ADSSL1Q8N142 457 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 AUTS2Q8WXX7 1259 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 CASP10Q92851 521 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 ERCC4Q92889 916 aaPredicted RBP11.71□□□□□ -0.53
HDAC6-211ENST00000443563 DHTKD1Q96HY7 919 aaPredicted RBP11.71□□□□□ -0.53
HDAC6-211ENST00000443563 MFSD14AQ96MC6 490 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 KLHL5Q96PQ7 755 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 OXCT2Q9BYC2 517 aaPredicted RBP11.71□□□□□ -0.53
HDAC6-211ENST00000443563 NUP62CLQ9H1M0 184 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 CLSTN2Q9H4D0 955 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 PDE11AQ9HCR9 933 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 INTS13Q9NVM9 706 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 PCDHB8Q9UN66 801 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 FAM50BQ9Y247 325 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 A0A0C4DFX4 3053 aa11.71□□□□□ -0.53
HDAC6-211ENST00000443563 M0QZQ0 153 aa11.7□□□□□ -0.54
HDAC6-211ENST00000443563 CETN3O15182 167 aa11.7□□□□□ -0.54
HDAC6-211ENST00000443563 CLASP2O75122 1294 aaKnown RBP11.7□□□□□ -0.54
HDAC6-211ENST00000443563 MBD3O95983 291 aa11.7□□□□□ -0.54
HDAC6-211ENST00000443563 ITGB3P05106 788 aa11.7□□□□□ -0.54
HDAC6-211ENST00000443563 CNPP09543 421 aaKnown RBP11.7□□□□□ -0.54
HDAC6-211ENST00000443563 ODC1P11926 461 aa11.7□□□□□ -0.54
HDAC6-211ENST00000443563 HOXB8P17481 243 aaPredicted RBP11.7□□□□□ -0.54
HDAC6-211ENST00000443563 TNNI1P19237 187 aa11.7□□□□□ -0.54
HDAC6-211ENST00000443563 BRCC3P46736 316 aa11.7□□□□□ -0.54
HDAC6-211ENST00000443563 AARSP49588 968 aaKnown RBP eCLIP11.7□□□□□ -0.54
HDAC6-211ENST00000443563 TAF6P49848 677 aa11.7□□□□□ -0.54
HDAC6-211ENST00000443563 LILRA4P59901 499 aa11.7□□□□□ -0.54
HDAC6-211ENST00000443563 MRPS5P82675 430 aaKnown RBP11.7□□□□□ -0.54
HDAC6-211ENST00000443563 RBP5P82980 135 aa11.7□□□□□ -0.54
HDAC6-211ENST00000443563 ENPEPQ07075 957 aa11.7□□□□□ -0.54
HDAC6-211ENST00000443563 ADAM9Q13443 819 aa11.7□□□□□ -0.54
HDAC6-211ENST00000443563 MORC3Q14149 939 aa11.7□□□□□ -0.54
HDAC6-211ENST00000443563 RTP2Q5QGT7 225 aa11.7□□□□□ -0.54
HDAC6-211ENST00000443563 CEP135Q66GS9 1140 aa11.7□□□□□ -0.54
HDAC6-211ENST00000443563 CD300LGQ6UXG3 332 aa11.7□□□□□ -0.54
HDAC6-211ENST00000443563 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.7□□□□□ -0.54
HDAC6-211ENST00000443563 CSGALNACT2Q8N6G5 542 aa11.7□□□□□ -0.54
HDAC6-211ENST00000443563 LRRC52Q8N7C0 313 aa11.7□□□□□ -0.54
HDAC6-211ENST00000443563 LNX1Q8TBB1 728 aaPredicted RBP11.7□□□□□ -0.54
HDAC6-211ENST00000443563 HDAC7Q8WUI4 952 aa11.7□□□□□ -0.54
HDAC6-211ENST00000443563 CGRRF1Q99675 332 aa11.7□□□□□ -0.54
HDAC6-211ENST00000443563 DZANK1Q9NVP4 752 aa11.7□□□□□ -0.54
HDAC6-211ENST00000443563 DSEQ9UL01 958 aa11.7□□□□□ -0.54
HDAC6-211ENST00000443563 BACE2Q9Y5Z0 518 aa11.7□□□□□ -0.54
HDAC6-211ENST00000443563 MTCL1Q9Y4B5 1905 aaKnown RBP11.69□□□□□ -0.54
HDAC6-211ENST00000443563 BICDL2A1A5D9 508 aa11.69□□□□□ -0.54
HDAC6-211ENST00000443563 TEX28O15482 410 aa11.69□□□□□ -0.54
HDAC6-211ENST00000443563 GLUD1P00367 558 aa11.69□□□□□ -0.54
HDAC6-211ENST00000443563 KRT19P08727 400 aa11.69□□□□□ -0.54
HDAC6-211ENST00000443563 DLATP10515 647 aaKnown RBP11.69□□□□□ -0.54
HDAC6-211ENST00000443563 KRT13P13646 458 aa11.69□□□□□ -0.54
HDAC6-211ENST00000443563 KCNA5P22460 613 aa11.69□□□□□ -0.54
HDAC6-211ENST00000443563 CCNE1P24864 410 aa11.69□□□□□ -0.54
HDAC6-211ENST00000443563 TKTP29401 623 aaKnown RBP11.69□□□□□ -0.54
HDAC6-211ENST00000443563 GTF2F1P35269 517 aaKnown RBP eCLIP11.69□□□□□ -0.54
HDAC6-211ENST00000443563 PSMC2P35998 433 aaKnown RBP11.69□□□□□ -0.54
HDAC6-211ENST00000443563 CLCN4P51793 760 aa11.69□□□□□ -0.54
HDAC6-211ENST00000443563 GUCY2FP51841 1108 aa11.69□□□□□ -0.54
HDAC6-211ENST00000443563 FKBP3Q00688 224 aaKnown RBP11.69□□□□□ -0.54
HDAC6-211ENST00000443563 MYO1EQ12965 1108 aa11.69□□□□□ -0.54
HDAC6-211ENST00000443563 KCNC3Q14003 757 aa11.69□□□□□ -0.54
HDAC6-211ENST00000443563 LEXMQ3ZCV2 418 aa11.69□□□□□ -0.54
HDAC6-211ENST00000443563 ZCWPW2Q504Y3 356 aa11.69□□□□□ -0.54
HDAC6-211ENST00000443563 ISM2Q6H9L7 571 aa11.69□□□□□ -0.54
HDAC6-211ENST00000443563 LLGL2Q6P1M3 1020 aa11.69□□□□□ -0.54
HDAC6-211ENST00000443563 FOXR2Q6PJQ5 311 aa11.69□□□□□ -0.54
HDAC6-211ENST00000443563 INTS8Q75QN2 995 aaKnown RBP11.69□□□□□ -0.54
HDAC6-211ENST00000443563 METTL23Q86XA0 190 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms