RNA–Protein interactions for RNA: ENST00000443438.5

RER1-205, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 540 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-205ENST00000443438 RASGEF1CQ8N431 466 aa9.18□□□□□ -0.94
RER1-205ENST00000443438 C1orf127Q8N9H9 656 aa9.18□□□□□ -0.94
RER1-205ENST00000443438 RBBP8NLQ8NC74 664 aaPredicted RBP9.18□□□□□ -0.94
RER1-205ENST00000443438 SMC1BQ8NDV3 1235 aa9.18□□□□□ -0.94
RER1-205ENST00000443438 SPATA4Q8NEY3 305 aa9.18□□□□□ -0.94
RER1-205ENST00000443438 TRIB2Q92519 343 aa9.18□□□□□ -0.94
RER1-205ENST00000443438 TAF4BQ92750 862 aa9.18□□□□□ -0.94
RER1-205ENST00000443438 FAM212AQ96EL1 285 aa9.18□□□□□ -0.94
RER1-205ENST00000443438 PBKQ96KB5 322 aa9.18□□□□□ -0.94
RER1-205ENST00000443438 PSMB7Q99436 277 aa9.18□□□□□ -0.94
RER1-205ENST00000443438 ZSWIM1Q9BR11 485 aa9.18□□□□□ -0.94
RER1-205ENST00000443438 AP5M1Q9H0R1 490 aa9.18□□□□□ -0.94
RER1-205ENST00000443438 UPF3AQ9H1J1 476 aaKnown RBP9.18□□□□□ -0.94
RER1-205ENST00000443438 CXCL16Q9H2A7 254 aa9.18□□□□□ -0.94
RER1-205ENST00000443438 ASB7Q9H672 318 aa9.18□□□□□ -0.94
RER1-205ENST00000443438 RNF14Q9UBS8 474 aa9.18□□□□□ -0.94
RER1-205ENST00000443438 TMEM59LQ9UK28 342 aa9.18□□□□□ -0.94
RER1-205ENST00000443438 ABT1Q9ULW3 272 aaKnown RBP9.18□□□□□ -0.94
RER1-205ENST00000443438 PCDHB4Q9Y5E5 795 aa9.18□□□□□ -0.94
RER1-205ENST00000443438 EVPLQ92817 2033 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 ANK1P16157 1881 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 MROH7Q68CQ1 1323 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 TARSL2A2RTX5 802 aaKnown RBP9.17□□□□□ -0.94
RER1-205ENST00000443438 TREHO43280 583 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 TNNC2P02585 160 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 RHOXF2BP0C7M4 288 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 AKR1A1P14550 325 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 PSMC4P43686 418 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 VSNL1P62760 191 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 LACTBP83111 547 aaPredicted RBP9.17□□□□□ -0.94
RER1-205ENST00000443438 TFAMQ00059 246 aaKnown RBP9.17□□□□□ -0.94
RER1-205ENST00000443438 CENPCQ03188 943 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 TMEM62Q0P6H9 643 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 PTP4A2Q12974 167 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 TRIM32Q13049 653 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 BRD3Q15059 726 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 TMEM132AQ24JP5 1023 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 CFAP221Q4G0U5 840 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 C11orf63Q6NUN7 778 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 CC2D1AQ6P1N0 951 aaPredicted RBP9.17□□□□□ -0.94
RER1-205ENST00000443438 WDR93Q6P2C0 686 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 TMEM270Q6UE05 265 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 PEX26Q7Z412 305 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 MCOLN2Q8IZK6 566 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 SYCE1Q8N0S2 351 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 CAGE1Q8TC20 777 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 HNRNPLLQ8WVV9 542 aaKnown RBP9.17□□□□□ -0.94
RER1-205ENST00000443438 DNAJB3Q8WWF6 145 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 CD101Q93033 1021 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 CYFIP2Q96F07 1278 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 FAXDC2Q96IV6 333 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 ANKRD36BP1Q96IX9 119 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 RHOXF2Q9BQY4 288 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 BCO2Q9BYV7 579 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 GCOM2Q9BZD3 368 aaPredicted RBP9.17□□□□□ -0.94
RER1-205ENST00000443438 NIF3L1Q9GZT8 377 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 FAM49AQ9H0Q0 323 aaPredicted RBP9.17□□□□□ -0.94
RER1-205ENST00000443438 SDCBP2Q9H190 292 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 VRTNQ9H8Y1 702 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 AVENQ9NQS1 362 aaPredicted RBP9.17□□□□□ -0.94
RER1-205ENST00000443438 CHORDC1Q9UHD1 332 aaPredicted RBP9.17□□□□□ -0.94
RER1-205ENST00000443438 GTF3C4Q9UKN8 822 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 AMFRQ9UKV5 643 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 POLIQ9UNA4 740 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 ALG6Q9Y672 507 aa9.17□□□□□ -0.94
RER1-205ENST00000443438 MYH10P35580 1976 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 C17orf102A2RUQ5 167 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 KCNK3O14649 394 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 ATMINO43313 823 aaPredicted RBP9.16□□□□□ -0.94
RER1-205ENST00000443438 KPNA6O60684 536 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 AOC2O75106 756 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 SEC31AO94979 1220 aaKnown RBP9.16□□□□□ -0.94
RER1-205ENST00000443438 NPTXRO95502 500 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 STAU1O95793 577 aaKnown RBP9.16□□□□□ -0.94
RER1-205ENST00000443438 ALDH1A1P00352 501 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 WEE2P0C1S8 567 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 TMEM191BP0C7N4 346 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 GNA15P30679 374 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 FLT3LGP49771 235 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 PEX5P50542 639 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 NOMO3P69849 1222 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 PRKCZQ05513 592 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 TRPC3Q13507 836 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 PCBP1Q15365 356 aaKnown RBP eCLIP9.16□□□□□ -0.943e-6■■■■■ 45.3
RER1-205ENST00000443438 ZBTB6Q15916 424 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 PTPROQ16827 1216 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 ZNF699Q32M78 642 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 DCAF4L1Q3SXM0 396 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 UBXN11Q5T124 520 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 DCAF12L1Q5VU92 463 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 ALKAL1Q6UXT8 129 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 TRIM72Q6ZMU5 477 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 MON1BQ7L1V2 547 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 DAAM2Q86T65 1068 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 PHF13Q86YI8 300 aaPredicted RBP9.16□□□□□ -0.94
RER1-205ENST00000443438 CPNE8Q86YQ8 564 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 NME8Q8N427 588 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 ACTRT1Q8TDG2 376 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 WHAMMQ8TF30 809 aa9.16□□□□□ -0.94
RER1-205ENST00000443438 HDAC7Q8WUI4 952 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms