RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 ZNF569Q5MCW4 686 aa20.49■□□□□ 0.87
SNX17-203ENST00000440760 FBXO47Q5MNV8 452 aa20.49■□□□□ 0.87
SNX17-203ENST00000440760 VPS36Q86VN1 386 aa20.49■□□□□ 0.87
SNX17-203ENST00000440760 FMNL3Q8IVF7 1028 aa20.49■□□□□ 0.87
SNX17-203ENST00000440760 AGPAT1Q99943 283 aa20.49■□□□□ 0.87
SNX17-203ENST00000440760 NIF3L1Q9GZT8 377 aa20.49■□□□□ 0.87
SNX17-203ENST00000440760 TUBGCP4Q9UGJ1 667 aa20.49■□□□□ 0.87
SNX17-203ENST00000440760 PARP2Q9UGN5 583 aa20.49■□□□□ 0.87
SNX17-203ENST00000440760 C2CD2Q9Y426 696 aa20.49■□□□□ 0.87
SNX17-203ENST00000440760 KRT86O43790 486 aa20.48■□□□□ 0.87
SNX17-203ENST00000440760 LPIN1Q14693 890 aa20.48■□□□□ 0.87
SNX17-203ENST00000440760 SGSM1Q2NKQ1 1148 aa20.48■□□□□ 0.87
SNX17-203ENST00000440760 ALKBH5Q6P6C2 394 aaKnown RBP20.48■□□□□ 0.87
SNX17-203ENST00000440760 RPUSD2Q8IZ73 545 aaKnown RBP20.48■□□□□ 0.87
SNX17-203ENST00000440760 SLC35F6Q8N357 371 aa20.48■□□□□ 0.87
SNX17-203ENST00000440760 SLC43A3Q8NBI5 491 aa20.48■□□□□ 0.87
SNX17-203ENST00000440760 SLC30A5Q8TAD4 765 aa20.48■□□□□ 0.87
SNX17-203ENST00000440760 C18orf25Q96B23 403 aaPredicted RBP20.48■□□□□ 0.87
SNX17-203ENST00000440760 TAS2R14Q9NYV8 317 aa20.48■□□□□ 0.87
SNX17-203ENST00000440760 NXF1Q9UBU9 619 aaKnown RBP20.48■□□□□ 0.87
SNX17-203ENST00000440760 SCN1AP35498 2009 aa20.48■□□□□ 0.87
SNX17-203ENST00000440760 MEIS3P2A8K0S8 358 aa20.48■□□□□ 0.87
SNX17-203ENST00000440760 CYP11B1P15538 503 aa20.48■□□□□ 0.87
SNX17-203ENST00000440760 CHRNB2P17787 502 aa20.48■□□□□ 0.87
SNX17-203ENST00000440760 CD58P19256 250 aa20.48■□□□□ 0.87
SNX17-203ENST00000440760 ASPAP45381 313 aa20.48■□□□□ 0.87
SNX17-203ENST00000440760 RAP1GAPP47736 663 aa20.48■□□□□ 0.87
SNX17-203ENST00000440760 KIF18AQ8NI77 898 aa20.48■□□□□ 0.87
SNX17-203ENST00000440760 DPP3Q9NY33 737 aa20.48■□□□□ 0.87
SNX17-203ENST00000440760 SALL4Q9UJQ4 1053 aa20.48■□□□□ 0.87
SNX17-203ENST00000440760 PADI3Q9ULW8 664 aa20.48■□□□□ 0.87
SNX17-203ENST00000440760 PCDHB4Q9Y5E5 795 aa20.48■□□□□ 0.87
SNX17-203ENST00000440760 ARVCFO00192 962 aa20.47■□□□□ 0.87
SNX17-203ENST00000440760 DNM1LO00429 736 aa20.47■□□□□ 0.87
SNX17-203ENST00000440760 PPEF2O14830 753 aa20.47■□□□□ 0.87
SNX17-203ENST00000440760 RPLP2P05387 115 aaKnown RBP20.47■□□□□ 0.87
SNX17-203ENST00000440760 MMEP08473 750 aa20.47■□□□□ 0.87
SNX17-203ENST00000440760 TNFAIP3P21580 790 aa20.47■□□□□ 0.87
SNX17-203ENST00000440760 IBSPP21815 317 aaPredicted RBP20.47■□□□□ 0.87
SNX17-203ENST00000440760 TBXAS1P24557 533 aaPredicted RBP20.47■□□□□ 0.87
SNX17-203ENST00000440760 PDE6CP51160 858 aa20.47■□□□□ 0.87
SNX17-203ENST00000440760 TMEM270Q6UE05 265 aa20.47■□□□□ 0.87
SNX17-203ENST00000440760 ZNF662Q6ZS27 426 aa20.47■□□□□ 0.87
SNX17-203ENST00000440760 ERVK-5Q9HDB9 667 aa20.47■□□□□ 0.87
SNX17-203ENST00000440760 CNTN3Q9P232 1028 aa20.47■□□□□ 0.87
SNX17-203ENST00000440760 AGAP1Q9UPQ3 857 aa20.47■□□□□ 0.87
SNX17-203ENST00000440760 MGEA5O60502 916 aa20.46■□□□□ 0.87
SNX17-203ENST00000440760 WEE2P0C1S8 567 aa20.46■□□□□ 0.87
SNX17-203ENST00000440760 CKBP12277 381 aa20.46■□□□□ 0.87
SNX17-203ENST00000440760 ANXA13P27216 316 aa20.46■□□□□ 0.87
SNX17-203ENST00000440760 PAK2Q13177 524 aa20.46■□□□□ 0.87
SNX17-203ENST00000440760 NAB2Q15742 525 aa20.46■□□□□ 0.87
SNX17-203ENST00000440760 ALKAL1Q6UXT8 129 aa20.46■□□□□ 0.87
SNX17-203ENST00000440760 FAM81BQ96LP2 452 aa20.46■□□□□ 0.87
SNX17-203ENST00000440760 PLEKHA5Q9HAU0 1116 aa20.46■□□□□ 0.87
SNX17-203ENST00000440760 PCDHB2Q9Y5E7 798 aa20.46■□□□□ 0.87
SNX17-203ENST00000440760 PJA2O43164 708 aa20.46■□□□□ 0.87
SNX17-203ENST00000440760 CD302Q8IX05 232 aa20.46■□□□□ 0.87
SNX17-203ENST00000440760 UBR7Q8N806 425 aa20.46■□□□□ 0.87
SNX17-203ENST00000440760 RBBP8NLQ8NC74 664 aaPredicted RBP20.46■□□□□ 0.87
SNX17-203ENST00000440760 PCDHB18PQ96TA0 734 aa20.46■□□□□ 0.87
SNX17-203ENST00000440760 TSGA10Q9BZW7 698 aa20.46■□□□□ 0.87
SNX17-203ENST00000440760 FAM105AQ9NUU6 356 aa20.46■□□□□ 0.87
SNX17-203ENST00000440760 ITGA11Q9UKX5 1188 aa20.46■□□□□ 0.87
SNX17-203ENST00000440760 CAPN6Q9Y6Q1 641 aa20.46■□□□□ 0.87
SNX17-203ENST00000440760 GPR182O15218 404 aa20.45■□□□□ 0.86
SNX17-203ENST00000440760 MOCS3O95396 460 aa20.45■□□□□ 0.86
SNX17-203ENST00000440760 FMO1Q01740 532 aa20.45■□□□□ 0.86
SNX17-203ENST00000440760 WDR72Q3MJ13 1102 aa20.45■□□□□ 0.86
SNX17-203ENST00000440760 TRAF7Q6Q0C0 670 aa20.45■□□□□ 0.86
SNX17-203ENST00000440760 DNAJC5GQ8N7S2 189 aa20.45■□□□□ 0.86
SNX17-203ENST00000440760 DDX1Q92499 740 aaKnown RBP20.45■□□□□ 0.86
SNX17-203ENST00000440760 LPPQ93052 612 aa20.45■□□□□ 0.86
SNX17-203ENST00000440760 MYH10P35580 1976 aa20.45■□□□□ 0.86
SNX17-203ENST00000440760 BUB1O43683 1085 aa20.45■□□□□ 0.86
SNX17-203ENST00000440760 CASQ1P31415 396 aa20.45■□□□□ 0.86
SNX17-203ENST00000440760 SSTR3P32745 418 aaPredicted RBP20.45■□□□□ 0.86
SNX17-203ENST00000440760 MBTPS1Q14703 1052 aa20.45■□□□□ 0.86
SNX17-203ENST00000440760 ZNF667Q5HYK9 610 aa20.45■□□□□ 0.86
SNX17-203ENST00000440760 FAM26DQ5JW98 314 aa20.45■□□□□ 0.86
SNX17-203ENST00000440760 NT5DC4Q86YG4 428 aa20.45■□□□□ 0.86
SNX17-203ENST00000440760 SECISBP2LQ93073 1101 aaKnown RBP20.45■□□□□ 0.86
SNX17-203ENST00000440760 ZFP42Q96MM3 310 aa20.45■□□□□ 0.86
SNX17-203ENST00000440760 SDCBP2Q9H190 292 aa20.45■□□□□ 0.86
SNX17-203ENST00000440760 SMYD3Q9H7B4 428 aa20.45■□□□□ 0.86
SNX17-203ENST00000440760 GOLGA2P5Q9HBQ8 144 aa20.45■□□□□ 0.86
SNX17-203ENST00000440760 LUC7LQ9NQ29 371 aaKnown RBP20.45■□□□□ 0.86
SNX17-203ENST00000440760 CISHQ9NSE2 258 aa20.45■□□□□ 0.86
SNX17-203ENST00000440760 SMIM28A0A1B0GU29 152 aa20.44■□□□□ 0.86
SNX17-203ENST00000440760 ZBTB6Q15916 424 aa20.44■□□□□ 0.86
SNX17-203ENST00000440760 ZNF394Q53GI3 561 aa20.44■□□□□ 0.86
SNX17-203ENST00000440760 HPDLQ96IR7 371 aa20.44■□□□□ 0.86
SNX17-203ENST00000440760 OGDHLQ9ULD0 1010 aa20.44■□□□□ 0.86
SNX17-203ENST00000440760 DERAQ9Y315 318 aa20.44■□□□□ 0.86
SNX17-203ENST00000440760 CDH8P55286 799 aa20.43■□□□□ 0.86
SNX17-203ENST00000440760 CDR2Q01850 454 aa20.43■□□□□ 0.86
SNX17-203ENST00000440760 TUBB4AP04350 444 aa20.43■□□□□ 0.86
SNX17-203ENST00000440760 ZSCAN20P17040 1043 aaPredicted RBP20.43■□□□□ 0.86
SNX17-203ENST00000440760 ABCB4P21439 1286 aa20.43■□□□□ 0.86
SNX17-203ENST00000440760 MLH1P40692 756 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms