RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 ELMO3Q96BJ8 720 aa17.46■□□□□ 0.39
CLCNKA-203ENST00000439316 OTUD5Q96G74 571 aa17.46■□□□□ 0.39
CLCNKA-203ENST00000439316 TAAR1Q96RJ0 339 aa17.46■□□□□ 0.39
CLCNKA-203ENST00000439316 NTPCRQ9BSD7 190 aaKnown RBP17.46■□□□□ 0.39
CLCNKA-203ENST00000439316 TACO1Q9BSH4 297 aaKnown RBP17.46■□□□□ 0.39
CLCNKA-203ENST00000439316 TRIM7Q9C029 511 aa17.46■□□□□ 0.39
CLCNKA-203ENST00000439316 KMT5AQ9NQR1 393 aa17.46■□□□□ 0.39
CLCNKA-203ENST00000439316 NEU2Q9Y3R4 380 aa17.46■□□□□ 0.39
CLCNKA-203ENST00000439316 MYPNQ86TC9 1320 aa17.46■□□□□ 0.38
CLCNKA-203ENST00000439316 IRF6O14896 467 aa17.45■□□□□ 0.38
CLCNKA-203ENST00000439316 GAS8O95995 478 aa17.45■□□□□ 0.38
CLCNKA-203ENST00000439316 FDX1P10109 184 aa17.45■□□□□ 0.38
CLCNKA-203ENST00000439316 ATF2P15336 505 aa17.45■□□□□ 0.38
CLCNKA-203ENST00000439316 SCP2P22307 547 aa17.45■□□□□ 0.38
CLCNKA-203ENST00000439316 MAP2K2P36507 400 aa17.45■□□□□ 0.38
CLCNKA-203ENST00000439316 CENPCQ03188 943 aa17.45■□□□□ 0.38
CLCNKA-203ENST00000439316 MAP1SQ66K74 1059 aaPredicted RBP17.45■□□□□ 0.38
CLCNKA-203ENST00000439316 ARID2Q68CP9 1835 aa17.45■□□□□ 0.38
CLCNKA-203ENST00000439316 ANO5Q75V66 913 aa17.45■□□□□ 0.38
CLCNKA-203ENST00000439316 OTUD6AQ7L8S5 288 aa17.45■□□□□ 0.38
CLCNKA-203ENST00000439316 ZNF677Q86XU0 584 aa17.45■□□□□ 0.38
CLCNKA-203ENST00000439316 CALCAP01258 141 aa17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 RRM1P23921 792 aa17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 TREML2Q5T2D2 321 aa17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 C15orf39Q6ZRI6 1047 aa17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 RPAINQ86UA6 219 aa17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 ERO1BQ86YB8 467 aa17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 GPD1LQ8N335 351 aa17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 CCDC63Q8NA47 563 aa17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 RDM1Q8NG50 284 aa17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 POMGNT1Q8WZA1 660 aa17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 TRAIPQ9BWF2 469 aa17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 C17orf75Q9HAS0 396 aa17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 ABCF3Q9NUQ8 709 aa17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 NINJ2Q9NZG7 142 aa17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 ADAMTS5Q9UNA0 930 aa17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 R3HDM2Q9Y2K5 976 aaKnown RBP17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 USP15Q9Y4E8 981 aaPredicted RBP17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 UMODL1Q5DID0 1318 aa17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 CFAP73A6NFT4 308 aa17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 CREB1P16220 341 aa17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 RPS6P62753 249 aaKnown RBP17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 SF3A3Q12874 501 aaKnown RBP eCLIP17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 KLF1Q13351 362 aaPredicted RBP17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 LRRC14Q15048 493 aa17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 TRMT1LQ7Z2T5 733 aaKnown RBP17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 REPS2Q8NFH8 660 aa17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 ATL2Q8NHH9 583 aa17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 DYDC1Q8WWB3 177 aa17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 PDCD2LQ9BRP1 358 aa17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 PI4K2AQ9BTU6 479 aa17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 C1orf112Q9NSG2 853 aa17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 CTNNAL1Q9UBT7 734 aa17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 TCEAL9Q9UHQ7 104 aa17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 LGALS13Q9UHV8 139 aa17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 RIPK3Q9Y572 518 aa17.44■□□□□ 0.38
CLCNKA-203ENST00000439316 ADGRA3Q8IWK6 1321 aa17.43■□□□□ 0.38
CLCNKA-203ENST00000439316 TCP11X1B4DZS4 312 aa17.43■□□□□ 0.38
CLCNKA-203ENST00000439316 PROSCO94903 275 aa17.43■□□□□ 0.38
CLCNKA-203ENST00000439316 ATP6V1G2O95670 118 aa17.43■□□□□ 0.38
CLCNKA-203ENST00000439316 CYP1A1P04798 512 aaPredicted RBP17.43■□□□□ 0.38
CLCNKA-203ENST00000439316 GARTP22102 1010 aa17.43■□□□□ 0.38
CLCNKA-203ENST00000439316 IRX3P78415 501 aaPredicted RBP17.43■□□□□ 0.38
CLCNKA-203ENST00000439316 HIBCHQ6NVY1 386 aaPredicted RBP17.43■□□□□ 0.38
CLCNKA-203ENST00000439316 MON1BQ7L1V2 547 aa17.43■□□□□ 0.38
CLCNKA-203ENST00000439316 MGARPQ8TDB4 240 aa17.43■□□□□ 0.38
CLCNKA-203ENST00000439316 CKAP2Q8WWK9 683 aa17.43■□□□□ 0.38
CLCNKA-203ENST00000439316 RRAGCQ9HB90 399 aa17.43■□□□□ 0.38
CLCNKA-203ENST00000439316 MCM8Q9UJA3 840 aa17.43■□□□□ 0.38
CLCNKA-203ENST00000439316 ANAPC5Q9UJX4 755 aa17.43■□□□□ 0.38
CLCNKA-203ENST00000439316 PCDHB2Q9Y5E7 798 aa17.43■□□□□ 0.38
CLCNKA-203ENST00000439316 WDR81Q562E7 1941 aa17.43■□□□□ 0.38
CLCNKA-203ENST00000439316 SPDYE5A6NIY4 337 aa17.42■□□□□ 0.38
CLCNKA-203ENST00000439316 THAP12O43422 761 aa17.42■□□□□ 0.38
CLCNKA-203ENST00000439316 PSTPIP1O43586 416 aa17.42■□□□□ 0.38
CLCNKA-203ENST00000439316 MYCLP12524 364 aaPredicted RBP17.42■□□□□ 0.38
CLCNKA-203ENST00000439316 TRIP13Q15645 432 aaPredicted RBP17.42■□□□□ 0.38
CLCNKA-203ENST00000439316 KYNUQ16719 465 aa17.42■□□□□ 0.38
CLCNKA-203ENST00000439316 RELL1Q8IUW5 271 aa17.42■□□□□ 0.38
CLCNKA-203ENST00000439316 SCLT1Q96NL6 688 aa17.42■□□□□ 0.38
CLCNKA-203ENST00000439316 ZNF408Q9H9D4 720 aa17.42■□□□□ 0.38
CLCNKA-203ENST00000439316 PXMP2Q9NR77 195 aa17.42■□□□□ 0.38
CLCNKA-203ENST00000439316 FGFR1OP2Q9NVK5 253 aa17.42■□□□□ 0.38
CLCNKA-203ENST00000439316 HOXC10Q9NYD6 342 aa17.42■□□□□ 0.38
CLCNKA-203ENST00000439316 ZNF214Q9UL59 606 aaPredicted RBP17.42■□□□□ 0.38
CLCNKA-203ENST00000439316 SPDYE16A6NNV3 312 aaPredicted RBP17.42■□□□□ 0.38
CLCNKA-203ENST00000439316 SLC8A1P32418 973 aa17.42■□□□□ 0.38
CLCNKA-203ENST00000439316 ADCY8P40145 1251 aa17.42■□□□□ 0.38
CLCNKA-203ENST00000439316 NEDD9Q14511 834 aa17.42■□□□□ 0.38
CLCNKA-203ENST00000439316 TMEM132BQ14DG7 1078 aa17.42■□□□□ 0.38
CLCNKA-203ENST00000439316 GALNTL6Q49A17 601 aa17.42■□□□□ 0.38
CLCNKA-203ENST00000439316 BRDTQ58F21 947 aaPredicted RBP17.42■□□□□ 0.38
CLCNKA-203ENST00000439316 FAM133BQ5BKY9 247 aaKnown RBP17.42■□□□□ 0.38
CLCNKA-203ENST00000439316 SNRNP48Q6IEG0 339 aaKnown RBP17.42■□□□□ 0.38
CLCNKA-203ENST00000439316 GADL1Q6ZQY3 521 aa17.42■□□□□ 0.38
CLCNKA-203ENST00000439316 BBOF1Q8ND07 529 aa17.42■□□□□ 0.38
CLCNKA-203ENST00000439316 CPA5Q8WXQ8 436 aa17.42■□□□□ 0.38
CLCNKA-203ENST00000439316 SENP7Q9BQF6 1050 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms