RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 ATF7P17544 494 aaPredicted RBP14.19□□□□□ -0.14
ACTN1-204ENST00000438964 SKIV2L2P42285 1042 aaKnown RBP14.19□□□□□ -0.14
ACTN1-204ENST00000438964 FMO1Q01740 532 aa14.19□□□□□ -0.14
ACTN1-204ENST00000438964 CUL3Q13618 768 aa14.19□□□□□ -0.14
ACTN1-204ENST00000438964 SEPT7Q16181 437 aaKnown RBP14.19□□□□□ -0.14
ACTN1-204ENST00000438964 CFAP157Q5JU67 520 aa14.19□□□□□ -0.14
ACTN1-204ENST00000438964 ARHGAP22Q7Z5H3 698 aa14.19□□□□□ -0.14
ACTN1-204ENST00000438964 AMIGO3Q86WK7 504 aa14.19□□□□□ -0.14
ACTN1-204ENST00000438964 HIPK4Q8NE63 616 aa14.19□□□□□ -0.14
ACTN1-204ENST00000438964 TRAIPQ9BWF2 469 aa14.19□□□□□ -0.14
ACTN1-204ENST00000438964 MOV10L1Q9BXT6 1211 aaKnown RBP14.19□□□□□ -0.14
ACTN1-204ENST00000438964 DCLK3Q9C098 648 aa14.19□□□□□ -0.14
ACTN1-204ENST00000438964 LRRC19Q9H756 370 aa14.19□□□□□ -0.14
ACTN1-204ENST00000438964 MARCOQ9UEW3 520 aaPredicted RBP14.19□□□□□ -0.14
ACTN1-204ENST00000438964 K7ENM7 598 aa14.19□□□□□ -0.14
ACTN1-204ENST00000438964 TJP3O95049 919 aa14.19□□□□□ -0.14
ACTN1-204ENST00000438964 KITP10721 976 aa14.19□□□□□ -0.14
ACTN1-204ENST00000438964 TCF4P15884 667 aa14.19□□□□□ -0.14
ACTN1-204ENST00000438964 MCL1Q07820 350 aa14.19□□□□□ -0.14
ACTN1-204ENST00000438964 MKRN3Q13064 507 aaKnown RBP14.19□□□□□ -0.14
ACTN1-204ENST00000438964 ACVR2BQ13705 512 aa14.19□□□□□ -0.14
ACTN1-204ENST00000438964 CYP1B1Q16678 543 aa14.19□□□□□ -0.14
ACTN1-204ENST00000438964 LMBRD2Q68DH5 695 aaPredicted RBP14.19□□□□□ -0.14
ACTN1-204ENST00000438964 MTHFD1LQ6UB35 978 aa14.19□□□□□ -0.14
ACTN1-204ENST00000438964 ENDOVQ8N8Q3 282 aaKnown RBP14.19□□□□□ -0.14
ACTN1-204ENST00000438964 SETDB2Q96T68 719 aa14.19□□□□□ -0.14
ACTN1-204ENST00000438964 CCDC77Q9BR77 488 aa14.19□□□□□ -0.14
ACTN1-204ENST00000438964 ZNF395Q9H8N7 513 aaPredicted RBP14.19□□□□□ -0.14
ACTN1-204ENST00000438964 KRT82Q9NSB4 513 aa14.19□□□□□ -0.14
ACTN1-204ENST00000438964 SAE1Q9UBE0 346 aaPredicted RBP14.19□□□□□ -0.14
ACTN1-204ENST00000438964 ROBO1Q9Y6N7 1651 aa14.19□□□□□ -0.14
ACTN1-204ENST00000438964 DDX60LQ5H9U9 1706 aaKnown RBP14.18□□□□□ -0.14
ACTN1-204ENST00000438964 UFL1O94874 794 aa14.18□□□□□ -0.14
ACTN1-204ENST00000438964 CYP3A4P08684 503 aa14.18□□□□□ -0.14
ACTN1-204ENST00000438964 SKIP12755 728 aa14.18□□□□□ -0.14
ACTN1-204ENST00000438964 SSTR1P30872 391 aa14.18□□□□□ -0.14
ACTN1-204ENST00000438964 KDSRQ06136 332 aa14.18□□□□□ -0.14
ACTN1-204ENST00000438964 ALYREFQ86V81 257 aaKnown RBP14.18□□□□□ -0.14
ACTN1-204ENST00000438964 LINC00116Q8NCU8 138 aa14.18□□□□□ -0.14
ACTN1-204ENST00000438964 SEMA4DQ92854 862 aa14.18□□□□□ -0.14
ACTN1-204ENST00000438964 ANKRD2Q9GZV1 360 aa14.18□□□□□ -0.14
ACTN1-204ENST00000438964 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.18□□□□□ -0.14
ACTN1-204ENST00000438964 GTPBP10A4D1E9 387 aaKnown RBP14.18□□□□□ -0.14
ACTN1-204ENST00000438964 A6NJR5 290 aa14.18□□□□□ -0.14
ACTN1-204ENST00000438964 GSC2O15499 205 aa14.18□□□□□ -0.14
ACTN1-204ENST00000438964 PSMG1O95456 288 aa14.18□□□□□ -0.14
ACTN1-204ENST00000438964 GSTO1P78417 241 aa14.18□□□□□ -0.14
ACTN1-204ENST00000438964 NR1H3Q13133 447 aa14.18□□□□□ -0.14
ACTN1-204ENST00000438964 IZUMO2Q6UXV1 221 aa14.18□□□□□ -0.14
ACTN1-204ENST00000438964 ZFPM1Q8IX07 1006 aa14.18□□□□□ -0.14
ACTN1-204ENST00000438964 MAIP1Q8WWC4 291 aa14.18□□□□□ -0.14
ACTN1-204ENST00000438964 DNAJC1Q96KC8 554 aaKnown RBP14.18□□□□□ -0.14
ACTN1-204ENST00000438964 LRCH1Q9Y2L9 728 aa14.18□□□□□ -0.14
ACTN1-204ENST00000438964 H3BRJ5 948 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 HAUS5O94927 633 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 CFHP08603 1231 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 ANXA13P27216 316 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 NRLP54845 237 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 RASA3Q14644 834 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 ZYXQ15942 572 aaKnown RBP14.17□□□□□ -0.14
ACTN1-204ENST00000438964 SLC5A9Q2M3M2 681 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 IRGCQ6NXR0 463 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 ZNF720Q7Z2F6 126 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 SLFN12Q8IYM2 578 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 KIFC3Q9BVG8 833 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 NEU2Q9Y3R4 380 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 EP400Q96L91 3159 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 ENO1P06733 434 aaKnown RBP14.17□□□□□ -0.14
ACTN1-204ENST00000438964 LDHCP07864 332 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 PLCB3Q01970 1234 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 CCDC15Q0P6D6 951 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 LBRQ14739 615 aaKnown RBP14.17□□□□□ -0.14
ACTN1-204ENST00000438964 CTC1Q2NKJ3 1217 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 WDR72Q3MJ13 1102 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 EFCAB3Q8N7B9 438 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 USP6NLQ92738 828 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 INPP5DQ92835 1189 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 TTC17Q96AE7 1141 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 RBM41Q96IZ5 413 aaKnown RBP14.17□□□□□ -0.14
ACTN1-204ENST00000438964 SHCBP1LQ9BZQ2 653 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 RHBDL2Q9NX52 303 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 NOCTQ9UK39 431 aaKnown RBP14.17□□□□□ -0.14
ACTN1-204ENST00000438964 PCDHAC2Q9Y5I4 1007 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 ATAD5Q96QE3 1844 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 CCDC195A0A1B0GUA6 201 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 MEI4A8MW99 385 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 SLITRK3O94933 977 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 CFBP00751 764 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 RTP1P59025 263 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 TAS2R40P59535 323 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 PPP4CP60510 307 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 GTF2IP78347 998 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 GPS1Q13098 491 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 PDK4Q16654 411 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 WASHC2DQ5SRD0 308 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 TCP10LQ8TDR4 215 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 DENND1AQ8TEH3 1009 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 POMGNT1Q8WZA1 660 aa14.17□□□□□ -0.14
ACTN1-204ENST00000438964 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.17□□□□□ -0.143e-7■□□□□ 9.8
ACTN1-204ENST00000438964 TAS2R1Q9NYW7 299 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms