RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 LRG1P02750 347 aa19.83■□□□□ 0.77
GTF3A-204ENST00000438571 SP9P0CG40 484 aa19.83■□□□□ 0.77
GTF3A-204ENST00000438571 ATF2P15336 505 aa19.83■□□□□ 0.77
GTF3A-204ENST00000438571 FCARP24071 287 aa19.83■□□□□ 0.77
GTF3A-204ENST00000438571 MCL1Q07820 350 aa19.83■□□□□ 0.77
GTF3A-204ENST00000438571 CTXN3Q4LDR2 81 aa19.83■□□□□ 0.77
GTF3A-204ENST00000438571 SLC44A4Q53GD3 710 aa19.83■□□□□ 0.77
GTF3A-204ENST00000438571 TANGO2Q6ICL3 276 aa19.83■□□□□ 0.77
GTF3A-204ENST00000438571 HS6ST3Q8IZP7 471 aa19.83■□□□□ 0.77
GTF3A-204ENST00000438571 DDX23Q9BUQ8 820 aaKnown RBP19.83■□□□□ 0.77
GTF3A-204ENST00000438571 F5P12259 2224 aa19.83■□□□□ 0.76
GTF3A-204ENST00000438571 NCANO14594 1321 aa19.82■□□□□ 0.76
GTF3A-204ENST00000438571 KANSL1LA0AUZ9 987 aa19.82■□□□□ 0.76
GTF3A-204ENST00000438571 SHISA7A6NL88 538 aa19.82■□□□□ 0.76
GTF3A-204ENST00000438571 PRRG1O14668 218 aa19.82■□□□□ 0.76
GTF3A-204ENST00000438571 ELF1P32519 619 aa19.82■□□□□ 0.76
GTF3A-204ENST00000438571 RPL9P32969 192 aaKnown RBP19.82■□□□□ 0.76
GTF3A-204ENST00000438571 NCKAP1LP55160 1127 aa19.82■□□□□ 0.76
GTF3A-204ENST00000438571 UBXN2BQ14CS0 331 aa19.82■□□□□ 0.76
GTF3A-204ENST00000438571 ZPBP2Q6X784 338 aa19.82■□□□□ 0.76
GTF3A-204ENST00000438571 C1orf210Q8IVY1 113 aa19.82■□□□□ 0.76
GTF3A-204ENST00000438571 REEP2Q9BRK0 252 aa19.82■□□□□ 0.76
GTF3A-204ENST00000438571 TIMM13Q9Y5L4 95 aaPredicted RBP19.82■□□□□ 0.76
GTF3A-204ENST00000438571 PPEF2O14830 753 aa19.81■□□□□ 0.76
GTF3A-204ENST00000438571 MOSPD3O75425 235 aa19.81■□□□□ 0.76
GTF3A-204ENST00000438571 VNN2O95498 520 aa19.81■□□□□ 0.76
GTF3A-204ENST00000438571 OR4Q2P0C623 313 aa19.81■□□□□ 0.76
GTF3A-204ENST00000438571 GJA1P17302 382 aa19.81■□□□□ 0.76
GTF3A-204ENST00000438571 PTPN2P17706 415 aa19.81■□□□□ 0.76
GTF3A-204ENST00000438571 MATR3P43243 847 aaKnown RBP eCLIP19.81■□□□□ 0.76
GTF3A-204ENST00000438571 GRM2Q14416 872 aa19.81■□□□□ 0.76
GTF3A-204ENST00000438571 DHX8Q14562 1220 aaKnown RBP19.81■□□□□ 0.76
GTF3A-204ENST00000438571 ZNF280DQ6N043 979 aa19.81■□□□□ 0.76
GTF3A-204ENST00000438571 RNF19BQ6ZMZ0 732 aa19.81■□□□□ 0.76
GTF3A-204ENST00000438571 RTL10Q7L3V2 364 aa19.81■□□□□ 0.76
GTF3A-204ENST00000438571 TCEAL8Q8IYN2 117 aa19.81■□□□□ 0.76
GTF3A-204ENST00000438571 CDK5RAP3Q96JB5 506 aa19.81■□□□□ 0.76
GTF3A-204ENST00000438571 LTB4R2Q9NPC1 389 aa19.81■□□□□ 0.76
GTF3A-204ENST00000438571 AVENQ9NQS1 362 aaPredicted RBP19.81■□□□□ 0.76
GTF3A-204ENST00000438571 BLOC1S4Q9NUP1 217 aa19.81■□□□□ 0.76
GTF3A-204ENST00000438571 DAXXQ9UER7 740 aaPredicted RBP19.81■□□□□ 0.76
GTF3A-204ENST00000438571 DMXL1Q9Y485 3027 aa19.81■□□□□ 0.76
GTF3A-204ENST00000438571 TTC26A0AVF1 554 aa19.8■□□□□ 0.76
GTF3A-204ENST00000438571 H3BQV1 296 aa19.8■□□□□ 0.76
GTF3A-204ENST00000438571 H7C4K7 107 aa19.8■□□□□ 0.76
GTF3A-204ENST00000438571 CLDN3O15551 220 aa19.8■□□□□ 0.76
GTF3A-204ENST00000438571 FAM189A1O60320 539 aa19.8■□□□□ 0.76
GTF3A-204ENST00000438571 ECI2O75521 394 aa19.8■□□□□ 0.76
GTF3A-204ENST00000438571 TARSP26639 723 aaKnown RBP19.8■□□□□ 0.76
GTF3A-204ENST00000438571 SMTNP53814 917 aa19.8■□□□□ 0.76
GTF3A-204ENST00000438571 ADCY1Q08828 1119 aa19.8■□□□□ 0.76
GTF3A-204ENST00000438571 TWF1Q12792 350 aa19.8■□□□□ 0.76
GTF3A-204ENST00000438571 TPRG1Q6ZUI0 275 aa19.8■□□□□ 0.76
GTF3A-204ENST00000438571 HAUS6Q7Z4H7 955 aa19.8■□□□□ 0.76
GTF3A-204ENST00000438571 GPBP1Q86WP2 473 aa19.8■□□□□ 0.76
GTF3A-204ENST00000438571 KIF12Q96FN5 646 aa19.8■□□□□ 0.76
GTF3A-204ENST00000438571 BICD1Q96G01 975 aa19.8■□□□□ 0.76
GTF3A-204ENST00000438571 CRISPLD1Q9H336 500 aa19.8■□□□□ 0.76
GTF3A-204ENST00000438571 HEBP1Q9NRV9 189 aa19.8■□□□□ 0.76
GTF3A-204ENST00000438571 CEP72Q9P209 647 aa19.8■□□□□ 0.76
GTF3A-204ENST00000438571 PCDHB8Q9UN66 801 aa19.8■□□□□ 0.76
GTF3A-204ENST00000438571 KIF3AQ9Y496 699 aa19.8■□□□□ 0.76
GTF3A-204ENST00000438571 ZNF292O60281 2723 aa19.8■□□□□ 0.76
GTF3A-204ENST00000438571 CPB1P15086 417 aa19.79■□□□□ 0.76
GTF3A-204ENST00000438571 LRPAP1P30533 357 aa19.79■□□□□ 0.76
GTF3A-204ENST00000438571 PRKCQQ04759 706 aa19.79■□□□□ 0.76
GTF3A-204ENST00000438571 MCM6Q14566 821 aa19.79■□□□□ 0.76
GTF3A-204ENST00000438571 FAM78AQ5JUQ0 283 aa19.79■□□□□ 0.76
GTF3A-204ENST00000438571 ARL6IP4Q66PJ3 421 aaKnown RBP19.79■□□□□ 0.76
GTF3A-204ENST00000438571 SLC39A4Q6P5W5 647 aa19.79■□□□□ 0.76
GTF3A-204ENST00000438571 KCNG4Q8TDN1 519 aa19.79■□□□□ 0.76
GTF3A-204ENST00000438571 SHDQ96IW2 340 aa19.79■□□□□ 0.76
GTF3A-204ENST00000438571 ZSWIM3Q96MP5 696 aa19.79■□□□□ 0.76
GTF3A-204ENST00000438571 PGLYRP2Q96PD5 576 aa19.79■□□□□ 0.76
GTF3A-204ENST00000438571 GDE1Q9NZC3 331 aa19.79■□□□□ 0.76
GTF3A-204ENST00000438571 DNAH14Q0VDD8 3507 aa19.79■□□□□ 0.76
GTF3A-204ENST00000438571 FAM170BA6NMN3 283 aa19.78■□□□□ 0.76
GTF3A-204ENST00000438571 LACTBL1A8MY62 500 aa19.78■□□□□ 0.76
GTF3A-204ENST00000438571 K7ENM7 598 aa19.78■□□□□ 0.76
GTF3A-204ENST00000438571 M0QZQ0 153 aa19.78■□□□□ 0.76
GTF3A-204ENST00000438571 LMNAP02545 664 aaKnown RBP19.78■□□□□ 0.76
GTF3A-204ENST00000438571 KARSQ15046 597 aaKnown RBP19.78■□□□□ 0.76
GTF3A-204ENST00000438571 ZBTB6Q15916 424 aa19.78■□□□□ 0.76
GTF3A-204ENST00000438571 ENOX2Q16206 610 aaKnown RBP19.78■□□□□ 0.76
GTF3A-204ENST00000438571 TPGS2Q68CL5 300 aa19.78■□□□□ 0.76
GTF3A-204ENST00000438571 PDZD4Q76G19 769 aaPredicted RBP19.78■□□□□ 0.76
GTF3A-204ENST00000438571 FIZ1Q96SL8 496 aa19.78■□□□□ 0.76
GTF3A-204ENST00000438571 SPATA6Q9NWH7 488 aaPredicted RBP19.78■□□□□ 0.76
GTF3A-204ENST00000438571 KCND2Q9NZV8 630 aa19.78■□□□□ 0.76
GTF3A-204ENST00000438571 LARSQ9P2J5 1176 aaKnown RBP19.78■□□□□ 0.76
GTF3A-204ENST00000438571 AFF4Q9UHB7 1163 aaKnown RBP19.78■□□□□ 0.76
GTF3A-204ENST00000438571 YIPF1Q9Y548 306 aa19.78■□□□□ 0.76
GTF3A-204ENST00000438571 TISP43B9A030 160 aa19.77■□□□□ 0.76
GTF3A-204ENST00000438571 CLTAP09496 248 aa19.77■□□□□ 0.76
GTF3A-204ENST00000438571 MYL4P12829 197 aa19.77■□□□□ 0.76
GTF3A-204ENST00000438571 PLCG1P19174 1290 aa19.77■□□□□ 0.76
GTF3A-204ENST00000438571 AARSP49588 968 aaKnown RBP eCLIP19.77■□□□□ 0.76
GTF3A-204ENST00000438571 LIG4P49917 911 aa19.77■□□□□ 0.76
GTF3A-204ENST00000438571 PFKPQ01813 784 aa19.77■□□□□ 0.76
GTF3A-204ENST00000438571 APPL2Q8NEU8 664 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms