RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 NBPF20Q3BBV1 942 aa22.63■■□□□ 1.21
PTPRF-207ENST00000436724 MTG1Q9BT17 334 aaPredicted RBP22.63■■□□□ 1.21
PTPRF-207ENST00000436724 HES2Q9Y543 173 aa22.63■■□□□ 1.21
PTPRF-207ENST00000436724 A0A0A6YYK5 440 aaPredicted RBP22.62■■□□□ 1.21
PTPRF-207ENST00000436724 GUCY2FP51841 1108 aa22.62■■□□□ 1.21
PTPRF-207ENST00000436724 HTRA3P83110 453 aa22.62■■□□□ 1.21
PTPRF-207ENST00000436724 ZNF699Q32M78 642 aa22.62■■□□□ 1.21
PTPRF-207ENST00000436724 SCARA5Q6ZMJ2 495 aa22.62■■□□□ 1.21
PTPRF-207ENST00000436724 LRRC57Q8N9N7 239 aa22.62■■□□□ 1.21
PTPRF-207ENST00000436724 ACAP3Q96P50 834 aa22.62■■□□□ 1.21
PTPRF-207ENST00000436724 OSBPL9Q96SU4 736 aa22.62■■□□□ 1.21
PTPRF-207ENST00000436724 PARD6BQ9BYG5 372 aa22.62■■□□□ 1.21
PTPRF-207ENST00000436724 XPNPEP3Q9NQH7 507 aa22.62■■□□□ 1.21
PTPRF-207ENST00000436724 PCDHB2Q9Y5E7 798 aa22.62■■□□□ 1.21
PTPRF-207ENST00000436724 PDE2AO00408 941 aaPredicted RBP22.62■■□□□ 1.21
PTPRF-207ENST00000436724 ADAMTS4O75173 837 aa22.62■■□□□ 1.21
PTPRF-207ENST00000436724 RTN2O75298 545 aa22.62■■□□□ 1.21
PTPRF-207ENST00000436724 CD58P19256 250 aa22.62■■□□□ 1.21
PTPRF-207ENST00000436724 SSTR3P32745 418 aaPredicted RBP22.62■■□□□ 1.21
PTPRF-207ENST00000436724 APLP1P51693 650 aa22.62■■□□□ 1.21
PTPRF-207ENST00000436724 RFFLQ8WZ73 363 aa22.62■■□□□ 1.21
PTPRF-207ENST00000436724 GOLGA1Q92805 767 aa22.62■■□□□ 1.21
PTPRF-207ENST00000436724 UPF3AQ9H1J1 476 aaKnown RBP22.62■■□□□ 1.21
PTPRF-207ENST00000436724 COG5Q9UP83 839 aa22.62■■□□□ 1.21
PTPRF-207ENST00000436724 CASP8AP2Q9UKL3 1982 aa22.62■■□□□ 1.21
PTPRF-207ENST00000436724 SCN10AQ9Y5Y9 1956 aa22.62■■□□□ 1.21
PTPRF-207ENST00000436724 MROH7Q68CQ1 1323 aa22.61■■□□□ 1.21
PTPRF-207ENST00000436724 CITO14578 2027 aa22.61■■□□□ 1.21
PTPRF-207ENST00000436724 ATMINO43313 823 aaPredicted RBP22.61■■□□□ 1.21
PTPRF-207ENST00000436724 ITGB3P05106 788 aa22.61■■□□□ 1.21
PTPRF-207ENST00000436724 CFHP08603 1231 aa22.61■■□□□ 1.21
PTPRF-207ENST00000436724 WEE2P0C1S8 567 aa22.61■■□□□ 1.21
PTPRF-207ENST00000436724 TERF2Q15554 542 aa22.61■■□□□ 1.21
PTPRF-207ENST00000436724 MEI1Q5TIA1 1274 aa22.61■■□□□ 1.21
PTPRF-207ENST00000436724 RBBP8NLQ8NC74 664 aaPredicted RBP22.61■■□□□ 1.21
PTPRF-207ENST00000436724 SPC25Q9HBM1 224 aa22.61■■□□□ 1.21
PTPRF-207ENST00000436724 SNTG2Q9NY99 539 aa22.61■■□□□ 1.21
PTPRF-207ENST00000436724 NCANO14594 1321 aa22.61■■□□□ 1.21
PTPRF-207ENST00000436724 GNAT1P11488 350 aa22.6■■□□□ 1.21
PTPRF-207ENST00000436724 GDF6Q6KF10 455 aaPredicted RBP22.6■■□□□ 1.21
PTPRF-207ENST00000436724 CC2D1AQ6P1N0 951 aaPredicted RBP22.6■■□□□ 1.21
PTPRF-207ENST00000436724 SLC27A1Q6PCB7 646 aa22.6■■□□□ 1.21
PTPRF-207ENST00000436724 CREG2Q8IUH2 290 aa22.6■■□□□ 1.21
PTPRF-207ENST00000436724 NIF3L1Q9GZT8 377 aa22.6■■□□□ 1.21
PTPRF-207ENST00000436724 ASB7Q9H672 318 aa22.6■■□□□ 1.21
PTPRF-207ENST00000436724 SMARCAL1Q9NZC9 954 aa22.6■■□□□ 1.21
PTPRF-207ENST00000436724 EHD2Q9NZN4 543 aa22.6■■□□□ 1.21
PTPRF-207ENST00000436724 NXF1Q9UBU9 619 aaKnown RBP22.6■■□□□ 1.21
PTPRF-207ENST00000436724 POLIQ9UNA4 740 aa22.6■■□□□ 1.21
PTPRF-207ENST00000436724 HYOU1Q9Y4L1 999 aa22.6■■□□□ 1.21
PTPRF-207ENST00000436724 TRIP11Q15643 1979 aa22.6■■□□□ 1.21
PTPRF-207ENST00000436724 CTAGE15A4D2H0 777 aa22.6■■□□□ 1.21
PTPRF-207ENST00000436724 KPNA6O60684 536 aa22.6■■□□□ 1.21
PTPRF-207ENST00000436724 CTAGE8P0CG41 777 aa22.6■■□□□ 1.21
PTPRF-207ENST00000436724 GZMAP12544 262 aa22.6■■□□□ 1.21
PTPRF-207ENST00000436724 GRM5P41594 1212 aa22.6■■□□□ 1.21
PTPRF-207ENST00000436724 ZNF394Q53GI3 561 aa22.6■■□□□ 1.21
PTPRF-207ENST00000436724 FAM47CQ5HY64 1035 aa22.6■■□□□ 1.21
PTPRF-207ENST00000436724 CTAGE6Q86UF2 777 aa22.6■■□□□ 1.21
PTPRF-207ENST00000436724 CTAGE4Q8IX94 777 aa22.6■■□□□ 1.21
PTPRF-207ENST00000436724 CXorf38Q8TB03 319 aa22.6■■□□□ 1.21
PTPRF-207ENST00000436724 RNF19AQ9NV58 838 aa22.6■■□□□ 1.21
PTPRF-207ENST00000436724 SRRDQ9UH36 339 aa22.6■■□□□ 1.21
PTPRF-207ENST00000436724 GTF2IRD1Q9UHL9 959 aa22.6■■□□□ 1.21
PTPRF-207ENST00000436724 PIN4Q9Y237 131 aaKnown RBP22.6■■□□□ 1.21
PTPRF-207ENST00000436724 ASGR1P07306 291 aa22.59■■□□□ 1.21
PTPRF-207ENST00000436724 ASPAP45381 313 aa22.59■■□□□ 1.21
PTPRF-207ENST00000436724 IFI16Q16666 785 aaKnown RBP22.59■■□□□ 1.21
PTPRF-207ENST00000436724 NOTUMQ6P988 496 aa22.59■■□□□ 1.21
PTPRF-207ENST00000436724 UBR7Q8N806 425 aa22.59■■□□□ 1.21
PTPRF-207ENST00000436724 NOA1Q8NC60 698 aaKnown RBP22.59■■□□□ 1.21
PTPRF-207ENST00000436724 WNT8BQ93098 351 aa22.59■■□□□ 1.21
PTPRF-207ENST00000436724 CNTN6Q9UQ52 1028 aa22.59■■□□□ 1.21
PTPRF-207ENST00000436724 ATP8B1O43520 1251 aa22.59■■□□□ 1.21
PTPRF-207ENST00000436724 BUB1BO60566 1050 aaPredicted RBP22.59■■□□□ 1.21
PTPRF-207ENST00000436724 PRLRP16471 622 aa22.59■■□□□ 1.21
PTPRF-207ENST00000436724 GNA15P30679 374 aa22.59■■□□□ 1.21
PTPRF-207ENST00000436724 TMEM132DQ14C87 1099 aa22.59■■□□□ 1.21
PTPRF-207ENST00000436724 KCNA10Q16322 511 aa22.59■■□□□ 1.21
PTPRF-207ENST00000436724 DCAF4L1Q3SXM0 396 aa22.59■■□□□ 1.21
PTPRF-207ENST00000436724 DAAM2Q86T65 1068 aa22.59■■□□□ 1.21
PTPRF-207ENST00000436724 REM2Q8IYK8 340 aaPredicted RBP22.59■■□□□ 1.21
PTPRF-207ENST00000436724 NXF3Q9H4D5 531 aaKnown RBP22.59■■□□□ 1.21
PTPRF-207ENST00000436724 CISHQ9NSE2 258 aa22.59■■□□□ 1.21
PTPRF-207ENST00000436724 TCP1P17987 556 aaKnown RBP22.58■■□□□ 1.21
PTPRF-207ENST00000436724 RAP1GAPP47736 663 aa22.58■■□□□ 1.21
PTPRF-207ENST00000436724 KYAT1Q16773 422 aa22.58■■□□□ 1.21
PTPRF-207ENST00000436724 WDR72Q3MJ13 1102 aa22.58■■□□□ 1.21
PTPRF-207ENST00000436724 CAGE1Q8TC20 777 aa22.58■■□□□ 1.21
PTPRF-207ENST00000436724 SASH3O75995 380 aa22.57■■□□□ 1.2
PTPRF-207ENST00000436724 VEGFBP49765 207 aa22.57■■□□□ 1.2
PTPRF-207ENST00000436724 CRYBB1P53674 252 aaPredicted RBP22.57■■□□□ 1.2
PTPRF-207ENST00000436724 BPIFB4P59827 614 aa22.57■■□□□ 1.2
PTPRF-207ENST00000436724 GPC5P78333 572 aa22.57■■□□□ 1.2
PTPRF-207ENST00000436724 CLEC16AQ2KHT3 1053 aa22.57■■□□□ 1.2
PTPRF-207ENST00000436724 PASD1Q8IV76 773 aa22.57■■□□□ 1.2
PTPRF-207ENST00000436724 CPA5Q8WXQ8 436 aa22.57■■□□□ 1.2
PTPRF-207ENST00000436724 MS4A14Q96JA4 679 aa22.57■■□□□ 1.2
PTPRF-207ENST00000436724 APOL6Q9BWW8 343 aa22.57■■□□□ 1.2
PTPRF-207ENST00000436724 CTTNBP2NLQ9P2B4 639 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms