RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 NCOR2Q9Y618 2525 aa12.7□□□□□ -0.38
CHRNA1-207ENST00000435083 HARSP12081 509 aaKnown RBP12.7□□□□□ -0.38
CHRNA1-207ENST00000435083 MUTP22033 750 aa12.7□□□□□ -0.38
CHRNA1-207ENST00000435083 CXCL12P48061 93 aa12.7□□□□□ -0.38
CHRNA1-207ENST00000435083 PEX3P56589 373 aa12.7□□□□□ -0.38
CHRNA1-207ENST00000435083 TWF1Q12792 350 aa12.7□□□□□ -0.38
CHRNA1-207ENST00000435083 MRPL58Q14197 206 aaKnown RBP12.7□□□□□ -0.38
CHRNA1-207ENST00000435083 ECM1Q16610 540 aa12.7□□□□□ -0.38
CHRNA1-207ENST00000435083 XKR4Q5GH76 650 aa12.7□□□□□ -0.38
CHRNA1-207ENST00000435083 HAUS3Q68CZ6 603 aa12.7□□□□□ -0.38
CHRNA1-207ENST00000435083 MAMSTRQ6ZN01 415 aa12.7□□□□□ -0.38
CHRNA1-207ENST00000435083 ZSCAN18Q8TBC5 510 aaPredicted RBP12.7□□□□□ -0.38
CHRNA1-207ENST00000435083 DEPDC1BQ8WUY9 529 aa12.7□□□□□ -0.38
CHRNA1-207ENST00000435083 C18orf25Q96B23 403 aaPredicted RBP12.7□□□□□ -0.38
CHRNA1-207ENST00000435083 ACAP3Q96P50 834 aa12.7□□□□□ -0.38
CHRNA1-207ENST00000435083 IER2Q9BTL4 223 aa12.7□□□□□ -0.38
CHRNA1-207ENST00000435083 TARS2Q9BW92 718 aaKnown RBP12.7□□□□□ -0.38
CHRNA1-207ENST00000435083 MRPL4Q9BYD3 311 aaKnown RBP12.7□□□□□ -0.38
CHRNA1-207ENST00000435083 TRPV5Q9NQA5 729 aa12.7□□□□□ -0.38
CHRNA1-207ENST00000435083 CEP72Q9P209 647 aa12.7□□□□□ -0.38
CHRNA1-207ENST00000435083 PHLPP2Q6ZVD8 1323 aa12.7□□□□□ -0.38
CHRNA1-207ENST00000435083 MOSPD3O75425 235 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 CPB1P15086 417 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 CCNE1P24864 410 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 RPL9P32969 192 aaKnown RBP12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 MCM4P33991 863 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 NPTX2P47972 431 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 ANAPC15P60006 121 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 SATB1Q01826 763 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 ZNF280DQ6N043 979 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 YAF2Q8IY57 180 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 CSGALNACT1Q8TDX6 532 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 SLITRK6Q9H5Y7 841 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 PTPRHQ9HD43 1115 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 ASAH2Q9NR71 780 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 AFF4Q9UHB7 1163 aaKnown RBP12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 KIAA1024Q9UPX6 916 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 COL4A2P08572 1712 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 HEPACAM2A8MVW5 462 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 CHURC1-FNTBB4DL54 471 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 RETP07949 1114 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 MCF2P10911 925 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 CHRNB1P11230 501 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 KCNE1P15382 129 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 MARCKSP29966 332 aaPredicted RBP12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 FNTBP49356 437 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 SIM2Q14190 667 aaPredicted RBP12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 TEAD2Q15562 447 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 RNF19BQ6ZMZ0 732 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 MFSD6LQ8IWD5 586 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 LEMD2Q8NC56 503 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 APPL2Q8NEU8 664 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 DDX12PQ92771 950 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 SUSD3Q96L08 255 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 TBC1D32Q96NH3 1257 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 TMEM134Q9H6X4 195 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 KMT5AQ9NQR1 393 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 DDX19AQ9NUU7 478 aaKnown RBP12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 LRWD1Q9UFC0 647 aa12.69□□□□□ -0.38
CHRNA1-207ENST00000435083 DNAH14Q0VDD8 3507 aa12.68□□□□□ -0.38
CHRNA1-207ENST00000435083 HIP1RO75146 1068 aa12.68□□□□□ -0.38
CHRNA1-207ENST00000435083 ADRB1P08588 477 aa12.68□□□□□ -0.38
CHRNA1-207ENST00000435083 KPNA1P52294 538 aaPredicted RBP12.68□□□□□ -0.38
CHRNA1-207ENST00000435083 SRSF5Q13243 272 aaKnown RBP12.68□□□□□ -0.38
CHRNA1-207ENST00000435083 ORC2Q13416 577 aaPredicted RBP12.68□□□□□ -0.38
CHRNA1-207ENST00000435083 GAS6Q14393 721 aa12.68□□□□□ -0.38
CHRNA1-207ENST00000435083 PPM1JQ5JR12 505 aa12.68□□□□□ -0.38
CHRNA1-207ENST00000435083 TTC38Q5R3I4 469 aa12.68□□□□□ -0.38
CHRNA1-207ENST00000435083 MPZL3Q6UWV2 235 aa12.68□□□□□ -0.38
CHRNA1-207ENST00000435083 TAS1R3Q7RTX0 852 aa12.68□□□□□ -0.38
CHRNA1-207ENST00000435083 GPIHBP1Q8IV16 184 aa12.68□□□□□ -0.38
CHRNA1-207ENST00000435083 NETO1Q8TDF5 533 aa12.68□□□□□ -0.38
CHRNA1-207ENST00000435083 ZBTB45Q96K62 511 aaPredicted RBP12.68□□□□□ -0.38
CHRNA1-207ENST00000435083 GPR88Q9GZN0 384 aa12.68□□□□□ -0.38
CHRNA1-207ENST00000435083 TRPV4Q9HBA0 871 aa12.68□□□□□ -0.38
CHRNA1-207ENST00000435083 SEMA4GQ9NTN9 838 aa12.68□□□□□ -0.38
CHRNA1-207ENST00000435083 RBM12Q9NTZ6 932 aaKnown RBP12.68□□□□□ -0.38
CHRNA1-207ENST00000435083 CNTN3Q9P232 1028 aa12.68□□□□□ -0.38
CHRNA1-207ENST00000435083 CITO14578 2027 aa12.68□□□□□ -0.38
CHRNA1-207ENST00000435083 FRYLO94915 3013 aa12.68□□□□□ -0.38
CHRNA1-207ENST00000435083 NCANO14594 1321 aa12.67□□□□□ -0.38
CHRNA1-207ENST00000435083 SLC38A8A6NNN8 435 aa12.67□□□□□ -0.38
CHRNA1-207ENST00000435083 E9PMD0 336 aa12.67□□□□□ -0.38
CHRNA1-207ENST00000435083 SLC30A4O14863 429 aa12.67□□□□□ -0.38
CHRNA1-207ENST00000435083 HRO43593 1189 aa12.67□□□□□ -0.38
CHRNA1-207ENST00000435083 LRP3O75074 770 aa12.67□□□□□ -0.38
CHRNA1-207ENST00000435083 NEK4P51957 841 aa12.67□□□□□ -0.38
CHRNA1-207ENST00000435083 EPHA5P54756 1037 aa12.67□□□□□ -0.38
CHRNA1-207ENST00000435083 DMWDQ09019 674 aa12.67□□□□□ -0.38
CHRNA1-207ENST00000435083 DMP1Q13316 513 aaPredicted RBP12.67□□□□□ -0.38
CHRNA1-207ENST00000435083 LRRC32Q14392 662 aa12.67□□□□□ -0.38
CHRNA1-207ENST00000435083 SEZ6Q53EL9 994 aa12.67□□□□□ -0.38
CHRNA1-207ENST00000435083 HEATR6Q6AI08 1181 aaKnown RBP12.67□□□□□ -0.38
CHRNA1-207ENST00000435083 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.67□□□□□ -0.38
CHRNA1-207ENST00000435083 SPEM1Q8N4L4 309 aa12.67□□□□□ -0.38
CHRNA1-207ENST00000435083 SHKBP1Q8TBC3 707 aa12.67□□□□□ -0.38
CHRNA1-207ENST00000435083 SNX29Q8TEQ0 813 aa12.67□□□□□ -0.38
CHRNA1-207ENST00000435083 E2F7Q96AV8 911 aa12.67□□□□□ -0.38
CHRNA1-207ENST00000435083 CHAMP1Q96JM3 812 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms