RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 SEMA4AQ9H3S1 761 aa19.81■□□□□ 0.76
CLK1-205ENST00000434813 PPANQ9NQ55 473 aaKnown RBP19.81■□□□□ 0.76
CLK1-205ENST00000434813 WHRNQ9P202 907 aa19.81■□□□□ 0.76
CLK1-205ENST00000434813 FBXO40Q9UH90 709 aa19.81■□□□□ 0.76
CLK1-205ENST00000434813 PTPRFP10586 1907 aa19.81■□□□□ 0.76
CLK1-205ENST00000434813 CNTNAP2Q9UHC6 1331 aa19.81■□□□□ 0.76
CLK1-205ENST00000434813 GMNCA6NCL1 334 aa19.81■□□□□ 0.76
CLK1-205ENST00000434813 FARP2O94887 1054 aaPredicted RBP19.81■□□□□ 0.76
CLK1-205ENST00000434813 EDN1P05305 212 aa19.81■□□□□ 0.76
CLK1-205ENST00000434813 NOP14P78316 857 aaKnown RBP19.81■□□□□ 0.76
CLK1-205ENST00000434813 KRT17Q04695 432 aa19.81■□□□□ 0.76
CLK1-205ENST00000434813 ADCY2Q08462 1091 aa19.81■□□□□ 0.76
CLK1-205ENST00000434813 CALCOCO2Q13137 446 aa19.81■□□□□ 0.76
CLK1-205ENST00000434813 PPP1R7Q15435 360 aa19.81■□□□□ 0.76
CLK1-205ENST00000434813 LIN9Q5TKA1 542 aa19.81■□□□□ 0.76
CLK1-205ENST00000434813 SEPT14Q6ZU15 432 aa19.81■□□□□ 0.76
CLK1-205ENST00000434813 SYDE1Q6ZW31 735 aaPredicted RBP19.81■□□□□ 0.76
CLK1-205ENST00000434813 ABRAQ8N0Z2 381 aa19.81■□□□□ 0.76
CLK1-205ENST00000434813 VCPIP1Q96JH7 1222 aa19.81■□□□□ 0.76
CLK1-205ENST00000434813 RIPK2O43353 540 aa19.8■□□□□ 0.76
CLK1-205ENST00000434813 PSTPIP1O43586 416 aa19.8■□□□□ 0.76
CLK1-205ENST00000434813 EDNRBP24530 442 aa19.8■□□□□ 0.76
CLK1-205ENST00000434813 GNA15P30679 374 aa19.8■□□□□ 0.76
CLK1-205ENST00000434813 CAPSQ13938 189 aa19.8■□□□□ 0.76
CLK1-205ENST00000434813 TMEM270Q6UE05 265 aa19.8■□□□□ 0.76
CLK1-205ENST00000434813 LBX2Q6XYB7 198 aa19.8■□□□□ 0.76
CLK1-205ENST00000434813 YTHDF3Q7Z739 585 aaKnown RBP19.8■□□□□ 0.76
CLK1-205ENST00000434813 PHF13Q86YI8 300 aaPredicted RBP19.8■□□□□ 0.76
CLK1-205ENST00000434813 ANKRD13AQ8IZ07 590 aa19.8■□□□□ 0.76
CLK1-205ENST00000434813 C1orf54Q8WWF1 131 aa19.8■□□□□ 0.76
CLK1-205ENST00000434813 CDCA5Q96FF9 252 aa19.8■□□□□ 0.76
CLK1-205ENST00000434813 PCYT2Q99447 389 aa19.8■□□□□ 0.76
CLK1-205ENST00000434813 PCDHB4Q9Y5E5 795 aa19.8■□□□□ 0.76
CLK1-205ENST00000434813 GSTTP1A0A1W2PQM5 241 aa19.8■□□□□ 0.76
CLK1-205ENST00000434813 GLTPD2A6NH11 291 aa19.8■□□□□ 0.76
CLK1-205ENST00000434813 EAPPQ56P03 285 aaPredicted RBP19.8■□□□□ 0.76
CLK1-205ENST00000434813 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.8■□□□□ 0.76
CLK1-205ENST00000434813 RBBP8NLQ8NC74 664 aaPredicted RBP19.8■□□□□ 0.76
CLK1-205ENST00000434813 C11orf70Q9BRQ4 267 aa19.8■□□□□ 0.76
CLK1-205ENST00000434813 ELP3Q9H9T3 547 aa19.8■□□□□ 0.76
CLK1-205ENST00000434813 MRPL47Q9HD33 250 aaKnown RBP19.8■□□□□ 0.76
CLK1-205ENST00000434813 SCINQ9Y6U3 715 aa19.8■□□□□ 0.76
CLK1-205ENST00000434813 PAPPA2Q9BXP8 1791 aa19.79■□□□□ 0.76
CLK1-205ENST00000434813 MEFVO15553 781 aaPredicted RBP19.79■□□□□ 0.76
CLK1-205ENST00000434813 ADCY3O60266 1144 aa19.79■□□□□ 0.76
CLK1-205ENST00000434813 POTEJP0CG39 1038 aa19.79■□□□□ 0.76
CLK1-205ENST00000434813 FGFR4P22455 802 aa19.79■□□□□ 0.76
CLK1-205ENST00000434813 PTK6Q13882 451 aa19.79■□□□□ 0.76
CLK1-205ENST00000434813 ZNF568Q3ZCX4 644 aa19.79■□□□□ 0.76
CLK1-205ENST00000434813 LLGL2Q6P1M3 1020 aa19.79■□□□□ 0.76
CLK1-205ENST00000434813 ZPBP2Q6X784 338 aa19.79■□□□□ 0.76
CLK1-205ENST00000434813 RIOX2Q8IUF8 465 aa19.79■□□□□ 0.76
CLK1-205ENST00000434813 OR5B17Q8NGF7 314 aa19.79■□□□□ 0.76
CLK1-205ENST00000434813 GRK7Q8WTQ7 553 aa19.79■□□□□ 0.76
CLK1-205ENST00000434813 CNKSR2Q8WXI2 1034 aa19.79■□□□□ 0.76
CLK1-205ENST00000434813 CENPTQ96BT3 561 aa19.79■□□□□ 0.76
CLK1-205ENST00000434813 HERPUD2Q9BSE4 406 aa19.79■□□□□ 0.76
CLK1-205ENST00000434813 CHST7Q9NS84 486 aa19.79■□□□□ 0.76
CLK1-205ENST00000434813 NRBP2Q9NSY0 501 aa19.79■□□□□ 0.76
CLK1-205ENST00000434813 ADAM22Q9P0K1 906 aa19.79■□□□□ 0.76
CLK1-205ENST00000434813 NUB1Q9Y5A7 615 aa19.79■□□□□ 0.76
CLK1-205ENST00000434813 IQCA1LA6NCM1 817 aa19.78■□□□□ 0.76
CLK1-205ENST00000434813 TP73O15350 636 aa19.78■□□□□ 0.76
CLK1-205ENST00000434813 KIAA0754O94854 1291 aa19.78■□□□□ 0.76
CLK1-205ENST00000434813 AGTP01019 485 aa19.78■□□□□ 0.76
CLK1-205ENST00000434813 CFHP08603 1231 aa19.78■□□□□ 0.76
CLK1-205ENST00000434813 C1QBPQ07021 282 aaKnown RBP19.78■□□□□ 0.76
CLK1-205ENST00000434813 C6orf118Q5T5N4 469 aa19.78■□□□□ 0.76
CLK1-205ENST00000434813 FAM160B1Q5W0V3 765 aa19.78■□□□□ 0.76
CLK1-205ENST00000434813 PLEKHA7Q6IQ23 1121 aa19.78■□□□□ 0.76
CLK1-205ENST00000434813 TRMT10CQ7L0Y3 403 aaKnown RBP19.78■□□□□ 0.76
CLK1-205ENST00000434813 ARMC9Q7Z3E5 817 aa19.78■□□□□ 0.76
CLK1-205ENST00000434813 BRSK2Q8IWQ3 736 aa19.78■□□□□ 0.76
CLK1-205ENST00000434813 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.78■□□□□ 0.76
CLK1-205ENST00000434813 RAPGEF5Q92565 580 aa19.78■□□□□ 0.76
CLK1-205ENST00000434813 OTUD5Q96G74 571 aa19.78■□□□□ 0.76
CLK1-205ENST00000434813 DCLK3Q9C098 648 aa19.78■□□□□ 0.76
CLK1-205ENST00000434813 C5orf60A6NFR6 353 aa19.78■□□□□ 0.76
CLK1-205ENST00000434813 RGS16O15492 202 aaPredicted RBP19.78■□□□□ 0.76
CLK1-205ENST00000434813 MMP13P45452 471 aa19.78■□□□□ 0.76
CLK1-205ENST00000434813 ZNF132P52740 706 aa19.78■□□□□ 0.76
CLK1-205ENST00000434813 AP3M2P53677 418 aa19.78■□□□□ 0.76
CLK1-205ENST00000434813 KLF1Q13351 362 aaPredicted RBP19.78■□□□□ 0.76
CLK1-205ENST00000434813 MAMLD1Q13495 774 aa19.78■□□□□ 0.76
CLK1-205ENST00000434813 NCOA4Q13772 614 aa19.78■□□□□ 0.76
CLK1-205ENST00000434813 C2CD6Q53TS8 623 aa19.78■□□□□ 0.76
CLK1-205ENST00000434813 TREML2Q5T2D2 321 aa19.78■□□□□ 0.76
CLK1-205ENST00000434813 UBAP2Q5T6F2 1119 aaKnown RBP19.78■□□□□ 0.76
CLK1-205ENST00000434813 RHBDF2Q6PJF5 856 aa19.78■□□□□ 0.76
CLK1-205ENST00000434813 GADL1Q6ZQY3 521 aa19.78■□□□□ 0.76
CLK1-205ENST00000434813 PHLDB2Q86SQ0 1253 aa19.78■□□□□ 0.76
CLK1-205ENST00000434813 ERO1BQ86YB8 467 aa19.78■□□□□ 0.76
CLK1-205ENST00000434813 PASD1Q8IV76 773 aa19.78■□□□□ 0.76
CLK1-205ENST00000434813 RHOT1Q8IXI2 618 aa19.78■□□□□ 0.76
CLK1-205ENST00000434813 UBR7Q8N806 425 aa19.78■□□□□ 0.76
CLK1-205ENST00000434813 PPME1Q9Y570 386 aa19.78■□□□□ 0.76
CLK1-205ENST00000434813 MAFO75444 373 aaPredicted RBP19.77■□□□□ 0.76
CLK1-205ENST00000434813 GAS8O95995 478 aa19.77■□□□□ 0.76
CLK1-205ENST00000434813 ITIH2P19823 946 aa19.77■□□□□ 0.76
CLK1-205ENST00000434813 GRM1Q13255 1194 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms