RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 ZC3H11AO75152 810 aaKnown RBP eCLIP24.98■■□□□ 1.59
SMARCAL1-208ENST00000434435 DDHD2O94830 711 aa24.98■■□□□ 1.59
SMARCAL1-208ENST00000434435 SLC9A1P19634 815 aa24.98■■□□□ 1.59
SMARCAL1-208ENST00000434435 PON1P27169 355 aa24.98■■□□□ 1.59
SMARCAL1-208ENST00000434435 ATICP31939 592 aa24.98■■□□□ 1.59
SMARCAL1-208ENST00000434435 PBX1P40424 430 aa24.98■■□□□ 1.59
SMARCAL1-208ENST00000434435 MYL6P60660 151 aa24.98■■□□□ 1.59
SMARCAL1-208ENST00000434435 SHHQ15465 462 aa24.98■■□□□ 1.59
SMARCAL1-208ENST00000434435 PTPN21Q16825 1174 aa24.98■■□□□ 1.59
SMARCAL1-208ENST00000434435 SGSM1Q2NKQ1 1148 aa24.98■■□□□ 1.59
SMARCAL1-208ENST00000434435 ZNF699Q32M78 642 aa24.98■■□□□ 1.59
SMARCAL1-208ENST00000434435 WDR44Q5JSH3 913 aa24.98■■□□□ 1.59
SMARCAL1-208ENST00000434435 TRIM65Q6PJ69 517 aa24.98■■□□□ 1.59
SMARCAL1-208ENST00000434435 ZNF280BQ86YH2 543 aa24.98■■□□□ 1.59
SMARCAL1-208ENST00000434435 COLGALT2Q8IYK4 626 aa24.98■■□□□ 1.59
SMARCAL1-208ENST00000434435 LMO3Q8TAP4 145 aa24.98■■□□□ 1.59
SMARCAL1-208ENST00000434435 ANP32BQ92688 251 aaKnown RBP24.98■■□□□ 1.59
SMARCAL1-208ENST00000434435 TAF4BQ92750 862 aa24.98■■□□□ 1.59
SMARCAL1-208ENST00000434435 NRDE2Q9H7Z3 1164 aa24.98■■□□□ 1.59
SMARCAL1-208ENST00000434435 ITIH6Q6UXX5 1313 aa24.97■■□□□ 1.59
SMARCAL1-208ENST00000434435 PODXLO00592 558 aa24.97■■□□□ 1.59
SMARCAL1-208ENST00000434435 PIRO00625 290 aa24.97■■□□□ 1.59
SMARCAL1-208ENST00000434435 PPEF2O14830 753 aa24.97■■□□□ 1.59
SMARCAL1-208ENST00000434435 ASS1P00966 412 aaKnown RBP24.97■■□□□ 1.59
SMARCAL1-208ENST00000434435 PNPLA4P41247 253 aa24.97■■□□□ 1.59
SMARCAL1-208ENST00000434435 NOP14P78316 857 aaKnown RBP24.97■■□□□ 1.59
SMARCAL1-208ENST00000434435 HTRA4P83105 476 aaPredicted RBP24.97■■□□□ 1.59
SMARCAL1-208ENST00000434435 MYO1EQ12965 1108 aa24.97■■□□□ 1.59
SMARCAL1-208ENST00000434435 BTG3Q14201 252 aaPredicted RBP24.97■■□□□ 1.59
SMARCAL1-208ENST00000434435 VSTM4Q8IW00 320 aa24.97■■□□□ 1.59
SMARCAL1-208ENST00000434435 NEK11Q8NG66 645 aa24.97■■□□□ 1.59
SMARCAL1-208ENST00000434435 NT5C1BQ96P26 610 aa24.97■■□□□ 1.59
SMARCAL1-208ENST00000434435 TMEM175Q9BSA9 504 aa24.97■■□□□ 1.59
SMARCAL1-208ENST00000434435 PI4K2AQ9BTU6 479 aa24.97■■□□□ 1.59
SMARCAL1-208ENST00000434435 CACNG4Q9UBN1 327 aa24.97■■□□□ 1.59
SMARCAL1-208ENST00000434435 INSL6Q9Y581 213 aa24.97■■□□□ 1.59
SMARCAL1-208ENST00000434435 TNRC18O15417 2968 aaPredicted RBP24.96■■□□□ 1.59
SMARCAL1-208ENST00000434435 B4GALT3O60512 393 aa24.96■■□□□ 1.59
SMARCAL1-208ENST00000434435 STAU1O95793 577 aaKnown RBP24.96■■□□□ 1.59
SMARCAL1-208ENST00000434435 CDC25BP30305 580 aa24.96■■□□□ 1.59
SMARCAL1-208ENST00000434435 KLK7P49862 253 aa24.96■■□□□ 1.59
SMARCAL1-208ENST00000434435 CLCNKBP51801 687 aa24.96■■□□□ 1.59
SMARCAL1-208ENST00000434435 UPP1Q16831 310 aa24.96■■□□□ 1.59
SMARCAL1-208ENST00000434435 SV2CQ496J9 727 aa24.96■■□□□ 1.59
SMARCAL1-208ENST00000434435 SCARA3Q6AZY7 606 aa24.96■■□□□ 1.59
SMARCAL1-208ENST00000434435 HPDLQ96IR7 371 aa24.96■■□□□ 1.59
SMARCAL1-208ENST00000434435 XYLT2Q9H1B5 865 aa24.96■■□□□ 1.59
SMARCAL1-208ENST00000434435 VRTNQ9H8Y1 702 aa24.96■■□□□ 1.59
SMARCAL1-208ENST00000434435 PLCB1Q9NQ66 1216 aa24.96■■□□□ 1.59
SMARCAL1-208ENST00000434435 TSC2P49815 1807 aa24.96■■□□□ 1.59
SMARCAL1-208ENST00000434435 LRRN2O75325 713 aa24.95■■□□□ 1.58
SMARCAL1-208ENST00000434435 OR1G1P47890 313 aa24.95■■□□□ 1.58
SMARCAL1-208ENST00000434435 TAF6P49848 677 aa24.95■■□□□ 1.58
SMARCAL1-208ENST00000434435 SPECC1LQ69YQ0 1117 aa24.95■■□□□ 1.58
SMARCAL1-208ENST00000434435 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.95■■□□□ 1.58
SMARCAL1-208ENST00000434435 RAD9AQ99638 391 aa24.95■■□□□ 1.58
SMARCAL1-208ENST00000434435 PAAF1Q9BRP4 392 aa24.95■■□□□ 1.58
SMARCAL1-208ENST00000434435 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.95■■□□□ 1.58
SMARCAL1-208ENST00000434435 FAM207AQ9NSI2 230 aaPredicted RBP24.95■■□□□ 1.58
SMARCAL1-208ENST00000434435 HCSTQ9UBK5 93 aa24.95■■□□□ 1.58
SMARCAL1-208ENST00000434435 APEX2Q9UBZ4 518 aa24.95■■□□□ 1.58
SMARCAL1-208ENST00000434435 DNAJB4Q9UDY4 337 aa24.95■■□□□ 1.58
SMARCAL1-208ENST00000434435 TLL1O43897 1013 aa24.94■■□□□ 1.58
SMARCAL1-208ENST00000434435 TRIM21P19474 475 aaKnown RBP24.94■■□□□ 1.58
SMARCAL1-208ENST00000434435 LRMPQ12912 555 aa24.94■■□□□ 1.58
SMARCAL1-208ENST00000434435 ZNF667Q5HYK9 610 aa24.94■■□□□ 1.58
SMARCAL1-208ENST00000434435 SPOUT1Q5T280 376 aaKnown RBP24.94■■□□□ 1.58
SMARCAL1-208ENST00000434435 SPOPLQ6IQ16 392 aa24.94■■□□□ 1.58
SMARCAL1-208ENST00000434435 CWH43Q9H720 699 aa24.94■■□□□ 1.58
SMARCAL1-208ENST00000434435 SIX2Q9NPC8 291 aa24.94■■□□□ 1.58
SMARCAL1-208ENST00000434435 DAAM1Q9Y4D1 1078 aa24.94■■□□□ 1.58
SMARCAL1-208ENST00000434435 CARNS1A5YM72 827 aa24.93■■□□□ 1.58
SMARCAL1-208ENST00000434435 TMEM189-UBE2V1I3L0A0 370 aa24.93■■□□□ 1.58
SMARCAL1-208ENST00000434435 RFX1P22670 979 aa24.93■■□□□ 1.58
SMARCAL1-208ENST00000434435 PAX3P23760 479 aa24.93■■□□□ 1.58
SMARCAL1-208ENST00000434435 BMP8BP34820 402 aa24.93■■□□□ 1.58
SMARCAL1-208ENST00000434435 TNNC1P63316 161 aa24.93■■□□□ 1.58
SMARCAL1-208ENST00000434435 MLLT1Q03111 559 aaPredicted RBP24.93■■□□□ 1.58
SMARCAL1-208ENST00000434435 DCLRE1AQ6PJP8 1040 aa24.93■■□□□ 1.58
SMARCAL1-208ENST00000434435 TMC6Q7Z403 805 aa24.93■■□□□ 1.58
SMARCAL1-208ENST00000434435 IQCDQ96DY2 449 aa24.93■■□□□ 1.58
SMARCAL1-208ENST00000434435 FAM81BQ96LP2 452 aa24.93■■□□□ 1.58
SMARCAL1-208ENST00000434435 NUP58Q9BVL2 599 aa24.93■■□□□ 1.58
SMARCAL1-208ENST00000434435 NIF3L1Q9GZT8 377 aa24.93■■□□□ 1.58
SMARCAL1-208ENST00000434435 GANQ9H2C0 597 aa24.93■■□□□ 1.58
SMARCAL1-208ENST00000434435 APOBEC3GQ9HC16 384 aaKnown RBP24.93■■□□□ 1.58
SMARCAL1-208ENST00000434435 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.93■■□□□ 1.58
SMARCAL1-208ENST00000434435 MRPL42Q9Y6G3 142 aaKnown RBP24.93■■□□□ 1.58
SMARCAL1-208ENST00000434435 B3GAT3O94766 335 aa24.92■■□□□ 1.58
SMARCAL1-208ENST00000434435 P4HA1P13674 534 aa24.92■■□□□ 1.58
SMARCAL1-208ENST00000434435 LAG3P18627 525 aa24.92■■□□□ 1.58
SMARCAL1-208ENST00000434435 SLC11A1P49279 550 aa24.92■■□□□ 1.58
SMARCAL1-208ENST00000434435 BCAR1P56945 870 aa24.92■■□□□ 1.58
SMARCAL1-208ENST00000434435 TRIM14Q14142 442 aa24.92■■□□□ 1.58
SMARCAL1-208ENST00000434435 KLHDC7AQ5VTJ3 777 aa24.92■■□□□ 1.58
SMARCAL1-208ENST00000434435 ARHGEF19Q8IW93 802 aa24.92■■□□□ 1.58
SMARCAL1-208ENST00000434435 DRC7Q8IY82 874 aa24.92■■□□□ 1.58
SMARCAL1-208ENST00000434435 PPM1KQ8N3J5 372 aa24.92■■□□□ 1.58
SMARCAL1-208ENST00000434435 FIBCD1Q8N539 461 aa24.92■■□□□ 1.58
SMARCAL1-208ENST00000434435 SP7Q8TDD2 431 aaPredicted RBP24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms