RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 TBC1D22BQ9NU19 505 aa6.73□□□□□ -1.33
NIPAL3-205ENST00000432012 MKS1Q9NXB0 559 aa6.73□□□□□ -1.33
NIPAL3-205ENST00000432012 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.73□□□□□ -1.33
NIPAL3-205ENST00000432012 KCNH4Q9UQ05 1017 aa6.73□□□□□ -1.33
NIPAL3-205ENST00000432012 PPP2R2CQ9Y2T4 447 aa6.73□□□□□ -1.33
NIPAL3-205ENST00000432012 PCDHGB2Q9Y5G2 931 aa6.73□□□□□ -1.33
NIPAL3-205ENST00000432012 SLC12A7Q9Y666 1083 aa6.73□□□□□ -1.33
NIPAL3-205ENST00000432012 SPEF2Q9C093 1822 aa6.73□□□□□ -1.33
NIPAL3-205ENST00000432012 XDHP47989 1333 aa6.73□□□□□ -1.33
NIPAL3-205ENST00000432012 SYNRGQ9UMZ2 1314 aa6.73□□□□□ -1.33
NIPAL3-205ENST00000432012 GOLGA6L9A6NEM1 432 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 GOLGA8BA8MQT2 603 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 DCDC2CA8MYV0 355 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 WDR64B1ANS9 1081 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 J3QL48 77 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 SMIM22K7EJ46 135 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 DDX3XO00571 662 aaKnown RBP eCLIP6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 MUTP22033 750 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 SYKP43405 635 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 CCT5P48643 541 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 GTF2H3Q13889 308 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 MUM1L1Q5H9M0 696 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 ADAT2Q7Z6V5 191 aaKnown RBP6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 GPR161Q8N6U8 529 aaKnown RBP6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 PPM1NQ8N819 430 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 NEK11Q8NG66 645 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 JAKMIP2Q96AA8 810 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 TTC17Q96AE7 1141 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 RIPOR3Q96MK2 946 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 PLEKHA5Q9HAU0 1116 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 SRPK3Q9UPE1 567 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 KLF18A0A0U1RQI7 1052 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 VGLL3A8MV65 326 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 RNF113AO15541 343 aaKnown RBP6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 ZEB2O60315 1214 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 TGDSO95455 350 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 HMGCRP04035 888 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 THBS1P07996 1170 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 MARCKSP29966 332 aaPredicted RBP6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 CASQ1P31415 396 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 NHLH1Q02575 133 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 GPS2Q13227 327 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 SMC1AQ14683 1233 aaKnown RBP6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 SLC39A14Q15043 492 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 KIAA0753Q2KHM9 967 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 CCDC38Q502W7 563 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 CDCP2Q5VXM1 449 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 TTLL5Q6EMB2 1281 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 TTLL7Q6ZT98 887 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 CATSPER4Q7RTX7 472 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 C12orf40Q86WS4 652 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 TMEM139Q8IV31 216 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 USP38Q8NB14 1042 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 BHMTQ93088 406 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 SMARCE1Q969G3 411 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 SLC30A3Q99726 388 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 COA1Q9GZY4 146 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 MARK1Q9P0L2 795 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 ZSWIM5Q9P217 1185 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 TRMT112Q9UI30 125 aaKnown RBP6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 SCAF8Q9UPN6 1271 aaKnown RBP6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 HPSEQ9Y251 543 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 MRFAP1Q9Y605 127 aa6.72□□□□□ -1.33
NIPAL3-205ENST00000432012 TMEM232C9JQI7 657 aa6.71□□□□□ -1.33
NIPAL3-205ENST00000432012 CPLX1O14810 134 aa6.71□□□□□ -1.33
NIPAL3-205ENST00000432012 FSCN2O14926 492 aa6.71□□□□□ -1.33
NIPAL3-205ENST00000432012 PPP6R2O75170 966 aa6.71□□□□□ -1.33
NIPAL3-205ENST00000432012 PPM1AP35813 382 aa6.71□□□□□ -1.33
NIPAL3-205ENST00000432012 PIK3CBP42338 1070 aa6.71□□□□□ -1.33
NIPAL3-205ENST00000432012 GOLGA8FQ08AF8 430 aa6.71□□□□□ -1.33
NIPAL3-205ENST00000432012 GOLGA8DPQ0D2H9 430 aa6.71□□□□□ -1.33
NIPAL3-205ENST00000432012 HYAL2Q12891 473 aa6.71□□□□□ -1.33
NIPAL3-205ENST00000432012 SLMAPQ14BN4 828 aa6.71□□□□□ -1.33
NIPAL3-205ENST00000432012 DENND5AQ6IQ26 1287 aa6.71□□□□□ -1.33
NIPAL3-205ENST00000432012 LMBR1LQ6UX01 489 aa6.71□□□□□ -1.33
NIPAL3-205ENST00000432012 TMTC1Q8IUR5 882 aa6.71□□□□□ -1.33
NIPAL3-205ENST00000432012 OR2C3Q8N628 320 aa6.71□□□□□ -1.33
NIPAL3-205ENST00000432012 IGSF22Q8N9C0 903 aa6.71□□□□□ -1.33
NIPAL3-205ENST00000432012 COA7Q96BR5 231 aa6.71□□□□□ -1.33
NIPAL3-205ENST00000432012 ACSF2Q96CM8 615 aaPredicted RBP6.71□□□□□ -1.33
NIPAL3-205ENST00000432012 BAG1Q99933 345 aaPredicted RBP6.71□□□□□ -1.33
NIPAL3-205ENST00000432012 SORBS1Q9BX66 1292 aaKnown RBP6.71□□□□□ -1.33
NIPAL3-205ENST00000432012 SLC13A1Q9BZW2 595 aa6.71□□□□□ -1.33
NIPAL3-205ENST00000432012 LACRTQ9GZZ8 138 aa6.71□□□□□ -1.33
NIPAL3-205ENST00000432012 KLHL25Q9H0H3 589 aa6.71□□□□□ -1.33
NIPAL3-205ENST00000432012 EPC1Q9H2F5 836 aa6.71□□□□□ -1.33
NIPAL3-205ENST00000432012 GPR108Q9NPR9 543 aa6.71□□□□□ -1.33
NIPAL3-205ENST00000432012 TOPORSQ9NS56 1045 aaPredicted RBP6.71□□□□□ -1.33
NIPAL3-205ENST00000432012 GJB4Q9NTQ9 266 aa6.71□□□□□ -1.33
NIPAL3-205ENST00000432012 CPA4Q9UI42 421 aa6.71□□□□□ -1.33
NIPAL3-205ENST00000432012 TACC3Q9Y6A5 838 aa6.71□□□□□ -1.33
NIPAL3-205ENST00000432012 MAST2Q6P0Q8 1798 aa6.71□□□□□ -1.34
NIPAL3-205ENST00000432012 ANKRD34BA5PLL1 514 aa6.71□□□□□ -1.34
NIPAL3-205ENST00000432012 GJB3O75712 270 aa6.71□□□□□ -1.34
NIPAL3-205ENST00000432012 BCRP11274 1271 aa6.71□□□□□ -1.34
NIPAL3-205ENST00000432012 CTGFP29279 349 aa6.71□□□□□ -1.34
NIPAL3-205ENST00000432012 FLT3LGP49771 235 aa6.71□□□□□ -1.34
NIPAL3-205ENST00000432012 RNF144AP50876 292 aaPredicted RBP6.71□□□□□ -1.34
NIPAL3-205ENST00000432012 GNG11P61952 73 aa6.71□□□□□ -1.34
NIPAL3-205ENST00000432012 PNOCQ13519 176 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms