RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 NBL1P41271 181 aa10.31□□□□□ -0.76
CDC42-IT1-201ENST00000431803 YARSP54577 528 aaKnown RBP10.31□□□□□ -0.76
CDC42-IT1-201ENST00000431803 USP46P62068 366 aa10.31□□□□□ -0.76
CDC42-IT1-201ENST00000431803 PPM1LQ5SGD2 360 aa10.31□□□□□ -0.76
CDC42-IT1-201ENST00000431803 MCTP1Q6DN14 999 aa10.31□□□□□ -0.76
CDC42-IT1-201ENST00000431803 BRICD5Q6PL45 260 aa10.31□□□□□ -0.76
CDC42-IT1-201ENST00000431803 MPZL3Q6UWV2 235 aa10.31□□□□□ -0.76
CDC42-IT1-201ENST00000431803 RTL10Q7L3V2 364 aa10.31□□□□□ -0.76
CDC42-IT1-201ENST00000431803 GRASPQ7Z6J2 395 aaPredicted RBP10.31□□□□□ -0.76
CDC42-IT1-201ENST00000431803 CCDC105Q8IYK2 499 aa10.31□□□□□ -0.76
CDC42-IT1-201ENST00000431803 SLC7A14Q8TBB6 771 aa10.31□□□□□ -0.76
CDC42-IT1-201ENST00000431803 SPIRE2Q8WWL2 714 aa10.31□□□□□ -0.76
CDC42-IT1-201ENST00000431803 TMX3Q96JJ7 454 aa10.31□□□□□ -0.76
CDC42-IT1-201ENST00000431803 PNMA5Q96PV4 448 aa10.31□□□□□ -0.76
CDC42-IT1-201ENST00000431803 CCDC94Q9BW85 323 aaPredicted RBP10.31□□□□□ -0.76
CDC42-IT1-201ENST00000431803 SLC38A7Q9NVC3 462 aa10.31□□□□□ -0.76
CDC42-IT1-201ENST00000431803 KCND2Q9NZV8 630 aa10.31□□□□□ -0.76
CDC42-IT1-201ENST00000431803 CNTN3Q9P232 1028 aa10.31□□□□□ -0.76
CDC42-IT1-201ENST00000431803 BACE2Q9Y5Z0 518 aa10.31□□□□□ -0.76
CDC42-IT1-201ENST00000431803 CDY1Q9Y6F8 540 aa10.31□□□□□ -0.76
CDC42-IT1-201ENST00000431803 DOCK6Q96HP0 2047 aa10.31□□□□□ -0.76
CDC42-IT1-201ENST00000431803 GVINP1Q7Z2Y8 2422 aa10.31□□□□□ -0.76
CDC42-IT1-201ENST00000431803 DCHS1Q96JQ0 3298 aa10.3□□□□□ -0.76
CDC42-IT1-201ENST00000431803 SFI1A8K8P3 1242 aa10.3□□□□□ -0.76
CDC42-IT1-201ENST00000431803 I3L4J1 428 aa10.3□□□□□ -0.76
CDC42-IT1-201ENST00000431803 PODXLO00592 558 aa10.3□□□□□ -0.76
CDC42-IT1-201ENST00000431803 TRIM66O15016 1216 aa10.3□□□□□ -0.76
CDC42-IT1-201ENST00000431803 SLC16A4O15374 487 aa10.3□□□□□ -0.76
CDC42-IT1-201ENST00000431803 CCL16O15467 120 aa10.3□□□□□ -0.76
CDC42-IT1-201ENST00000431803 TRAPPC3O43617 180 aa10.3□□□□□ -0.76
CDC42-IT1-201ENST00000431803 XYLBO75191 536 aa10.3□□□□□ -0.76
CDC42-IT1-201ENST00000431803 TOM1L1O75674 476 aa10.3□□□□□ -0.76
CDC42-IT1-201ENST00000431803 MAPTP10636 758 aaKnown RBP10.3□□□□□ -0.76
CDC42-IT1-201ENST00000431803 PLS3P13797 630 aa10.3□□□□□ -0.76
CDC42-IT1-201ENST00000431803 SLC19A1P41440 591 aa10.3□□□□□ -0.76
CDC42-IT1-201ENST00000431803 SLC12A3P55017 1021 aa10.3□□□□□ -0.76
CDC42-IT1-201ENST00000431803 OSTNP61366 133 aa10.3□□□□□ -0.76
CDC42-IT1-201ENST00000431803 NTHL1P78549 312 aa10.3□□□□□ -0.76
CDC42-IT1-201ENST00000431803 UVSSAQ2YD98 709 aa10.3□□□□□ -0.76
CDC42-IT1-201ENST00000431803 TMEM119Q4V9L6 283 aa10.3□□□□□ -0.76
CDC42-IT1-201ENST00000431803 AXDND1Q5T1B0 1012 aaPredicted RBP10.3□□□□□ -0.76
CDC42-IT1-201ENST00000431803 ARL6IP4Q66PJ3 421 aaKnown RBP10.3□□□□□ -0.76
CDC42-IT1-201ENST00000431803 SLC8B1Q6J4K2 584 aa10.3□□□□□ -0.76
CDC42-IT1-201ENST00000431803 ANKS3Q6ZW76 656 aa10.3□□□□□ -0.76
CDC42-IT1-201ENST00000431803 FAM160A2Q8N612 972 aaPredicted RBP10.3□□□□□ -0.76
CDC42-IT1-201ENST00000431803 SYT2Q8N9I0 419 aaPredicted RBP10.3□□□□□ -0.76
CDC42-IT1-201ENST00000431803 TMEM161BQ8NDZ6 487 aa10.3□□□□□ -0.76
CDC42-IT1-201ENST00000431803 FGF13Q92913 245 aa10.3□□□□□ -0.76
CDC42-IT1-201ENST00000431803 KCNN1Q92952 543 aa10.3□□□□□ -0.76
CDC42-IT1-201ENST00000431803 RTP3Q9BQQ7 232 aa10.3□□□□□ -0.76
CDC42-IT1-201ENST00000431803 SLC2A4RGQ9NR83 387 aa10.3□□□□□ -0.76
CDC42-IT1-201ENST00000431803 CDH7Q9ULB5 785 aa10.3□□□□□ -0.76
CDC42-IT1-201ENST00000431803 NUMBLQ9Y6R0 609 aa10.3□□□□□ -0.76
CDC42-IT1-201ENST00000431803 SPTBN4Q9H254 2564 aa10.3□□□□□ -0.76
CDC42-IT1-201ENST00000431803 NOTCH4Q99466 2003 aa10.29□□□□□ -0.76
CDC42-IT1-201ENST00000431803 VWA3AA6NCI4 1184 aa10.29□□□□□ -0.76
CDC42-IT1-201ENST00000431803 SYN3O14994 580 aa10.29□□□□□ -0.76
CDC42-IT1-201ENST00000431803 TBC1D4O60343 1298 aa10.29□□□□□ -0.76
CDC42-IT1-201ENST00000431803 CENPBP07199 599 aaPredicted RBP10.29□□□□□ -0.76
CDC42-IT1-201ENST00000431803 GJB2P29033 226 aa10.29□□□□□ -0.76
CDC42-IT1-201ENST00000431803 BRCC3P46736 316 aa10.29□□□□□ -0.76
CDC42-IT1-201ENST00000431803 MCL1Q07820 350 aa10.29□□□□□ -0.76
CDC42-IT1-201ENST00000431803 RAD51AP2Q09MP3 1159 aa10.29□□□□□ -0.76
CDC42-IT1-201ENST00000431803 NOLC1Q14978 699 aaKnown RBP eCLIP10.29□□□□□ -0.76
CDC42-IT1-201ENST00000431803 PHLDB3Q6NSJ2 640 aa10.29□□□□□ -0.76
CDC42-IT1-201ENST00000431803 PARM1Q6UWI2 310 aa10.29□□□□□ -0.76
CDC42-IT1-201ENST00000431803 ZPBP2Q6X784 338 aa10.29□□□□□ -0.76
CDC42-IT1-201ENST00000431803 DTWD2Q8NBA8 298 aa10.29□□□□□ -0.76
CDC42-IT1-201ENST00000431803 GPR152Q8TDT2 470 aa10.29□□□□□ -0.76
CDC42-IT1-201ENST00000431803 FGF14Q92915 247 aa10.29□□□□□ -0.76
CDC42-IT1-201ENST00000431803 C18orf25Q96B23 403 aaPredicted RBP10.29□□□□□ -0.76
CDC42-IT1-201ENST00000431803 ZBTB45Q96K62 511 aaPredicted RBP10.29□□□□□ -0.76
CDC42-IT1-201ENST00000431803 ACAP3Q96P50 834 aa10.29□□□□□ -0.76
CDC42-IT1-201ENST00000431803 TCHPQ9BT92 498 aa10.29□□□□□ -0.76
CDC42-IT1-201ENST00000431803 TBC1D17Q9HA65 648 aa10.29□□□□□ -0.76
CDC42-IT1-201ENST00000431803 PRDM9Q9NQV7 894 aa10.29□□□□□ -0.76
CDC42-IT1-201ENST00000431803 ARHGEF3Q9NR81 526 aa10.29□□□□□ -0.76
CDC42-IT1-201ENST00000431803 HCFC1R1Q9NWW0 138 aa10.29□□□□□ -0.76
CDC42-IT1-201ENST00000431803 KCNG1Q9UIX4 513 aa10.29□□□□□ -0.76
CDC42-IT1-201ENST00000431803 KCNH3Q9ULD8 1083 aa10.29□□□□□ -0.76
CDC42-IT1-201ENST00000431803 CA14Q9ULX7 337 aa10.29□□□□□ -0.76
CDC42-IT1-201ENST00000431803 PDCD11Q14690 1871 aaKnown RBP10.29□□□□□ -0.76
CDC42-IT1-201ENST00000431803 CITO14578 2027 aa10.29□□□□□ -0.76
CDC42-IT1-201ENST00000431803 PTPRZ1P23471 2315 aaPredicted RBP10.29□□□□□ -0.76
CDC42-IT1-201ENST00000431803 FAM186AA6NE01 2351 aa10.29□□□□□ -0.76
CDC42-IT1-201ENST00000431803 ARHGEF37A1IGU5 675 aa10.28□□□□□ -0.76
CDC42-IT1-201ENST00000431803 PRR23AA6NEV1 266 aa10.28□□□□□ -0.76
CDC42-IT1-201ENST00000431803 H3BQV1 296 aa10.28□□□□□ -0.76
CDC42-IT1-201ENST00000431803 SLC26A4O43511 780 aa10.28□□□□□ -0.76
CDC42-IT1-201ENST00000431803 ABLIM3O94929 683 aa10.28□□□□□ -0.76
CDC42-IT1-201ENST00000431803 PLA2G4BP0C869 781 aa10.28□□□□□ -0.76
CDC42-IT1-201ENST00000431803 RPL9P32969 192 aaKnown RBP10.28□□□□□ -0.76
CDC42-IT1-201ENST00000431803 MCM2P49736 904 aa10.28□□□□□ -0.76
CDC42-IT1-201ENST00000431803 SMTNP53814 917 aa10.28□□□□□ -0.76
CDC42-IT1-201ENST00000431803 NCKAP1LP55160 1127 aa10.28□□□□□ -0.76
CDC42-IT1-201ENST00000431803 ROR1Q01973 937 aa10.28□□□□□ -0.76
CDC42-IT1-201ENST00000431803 GUCA2AQ02747 115 aa10.28□□□□□ -0.76
CDC42-IT1-201ENST00000431803 STRN3Q13033 797 aa10.28□□□□□ -0.76
CDC42-IT1-201ENST00000431803 MRPL58Q14197 206 aaKnown RBP10.28□□□□□ -0.76
CDC42-IT1-201ENST00000431803 ANGPT1Q15389 498 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms