RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 DDX12PQ92771 950 aa18.64■□□□□ 0.57
CPSF4-203ENST00000430038 TCEAL4Q96EI5 215 aa18.64■□□□□ 0.57
CPSF4-203ENST00000430038 CALML4Q96GE6 196 aa18.64■□□□□ 0.57
CPSF4-203ENST00000430038 SLC2A4RGQ9NR83 387 aa18.64■□□□□ 0.57
CPSF4-203ENST00000430038 FBXO2Q9UK22 296 aaPredicted RBP18.64■□□□□ 0.57
CPSF4-203ENST00000430038 FAM186AA6NE01 2351 aa18.63■□□□□ 0.57
CPSF4-203ENST00000430038 SLC26A4O43511 780 aa18.63■□□□□ 0.57
CPSF4-203ENST00000430038 TRAK2O60296 914 aa18.63■□□□□ 0.57
CPSF4-203ENST00000430038 XYLBO75191 536 aa18.63■□□□□ 0.57
CPSF4-203ENST00000430038 RHOP08100 348 aa18.63■□□□□ 0.57
CPSF4-203ENST00000430038 ATF2P15336 505 aa18.63■□□□□ 0.57
CPSF4-203ENST00000430038 LRPAP1P30533 357 aa18.63■□□□□ 0.57
CPSF4-203ENST00000430038 PABPC1LQ4VXU2 614 aaKnown RBP18.63■□□□□ 0.57
CPSF4-203ENST00000430038 CCDC105Q8IYK2 499 aa18.63■□□□□ 0.57
CPSF4-203ENST00000430038 DTWD2Q8NBA8 298 aa18.63■□□□□ 0.57
CPSF4-203ENST00000430038 MCRS1Q96EZ8 462 aa18.63■□□□□ 0.57
CPSF4-203ENST00000430038 KXD1Q9BQD3 176 aa18.63■□□□□ 0.57
CPSF4-203ENST00000430038 CCSER1Q9C0I3 900 aa18.63■□□□□ 0.57
CPSF4-203ENST00000430038 TBC1D17Q9HA65 648 aa18.63■□□□□ 0.57
CPSF4-203ENST00000430038 DLGAP2Q9P1A6 1054 aa18.63■□□□□ 0.57
CPSF4-203ENST00000430038 NUB1Q9Y5A7 615 aa18.63■□□□□ 0.57
CPSF4-203ENST00000430038 MIA3Q5JRA6 1907 aa18.62■□□□□ 0.57
CPSF4-203ENST00000430038 A0A0B4J269 797 aa18.62■□□□□ 0.57
CPSF4-203ENST00000430038 PROB1E7EW31 1015 aa18.62■□□□□ 0.57
CPSF4-203ENST00000430038 K7ENM7 598 aa18.62■□□□□ 0.57
CPSF4-203ENST00000430038 M0QZQ0 153 aa18.62■□□□□ 0.57
CPSF4-203ENST00000430038 FAM13AO94988 1023 aa18.62■□□□□ 0.57
CPSF4-203ENST00000430038 DCNP07585 359 aaKnown RBP18.62■□□□□ 0.57
CPSF4-203ENST00000430038 OR4Q2P0C623 313 aa18.62■□□□□ 0.57
CPSF4-203ENST00000430038 CEBPBP17676 345 aa18.62■□□□□ 0.57
CPSF4-203ENST00000430038 SYT1P21579 422 aa18.62■□□□□ 0.57
CPSF4-203ENST00000430038 MCM4P33991 863 aa18.62■□□□□ 0.57
CPSF4-203ENST00000430038 DDIT3P35638 169 aa18.62■□□□□ 0.57
CPSF4-203ENST00000430038 MATR3P43243 847 aaKnown RBP eCLIP18.62■□□□□ 0.57
CPSF4-203ENST00000430038 GTF2BQ00403 316 aa18.62■□□□□ 0.57
CPSF4-203ENST00000430038 CTXN3Q4LDR2 81 aa18.62■□□□□ 0.57
CPSF4-203ENST00000430038 PRSS36Q5K4E3 855 aa18.62■□□□□ 0.57
CPSF4-203ENST00000430038 RNF19BQ6ZMZ0 732 aa18.62■□□□□ 0.57
CPSF4-203ENST00000430038 TCEAL8Q8IYN2 117 aa18.62■□□□□ 0.57
CPSF4-203ENST00000430038 HS6ST3Q8IZP7 471 aa18.62■□□□□ 0.57
CPSF4-203ENST00000430038 LARP4BQ92615 738 aaKnown RBP18.62■□□□□ 0.57
CPSF4-203ENST00000430038 KIF12Q96FN5 646 aa18.62■□□□□ 0.57
CPSF4-203ENST00000430038 BICD1Q96G01 975 aa18.62■□□□□ 0.57
CPSF4-203ENST00000430038 FOXQ1Q9C009 403 aa18.62■□□□□ 0.57
CPSF4-203ENST00000430038 CRISPLD1Q9H336 500 aa18.62■□□□□ 0.57
CPSF4-203ENST00000430038 PLEKHA5Q9HAU0 1116 aa18.62■□□□□ 0.57
CPSF4-203ENST00000430038 PARVGQ9HBI0 331 aa18.62■□□□□ 0.57
CPSF4-203ENST00000430038 CYP4F11Q9HBI6 524 aa18.62■□□□□ 0.57
CPSF4-203ENST00000430038 CEP72Q9P209 647 aa18.62■□□□□ 0.57
CPSF4-203ENST00000430038 KCNG1Q9UIX4 513 aa18.62■□□□□ 0.57
CPSF4-203ENST00000430038 ZFP37Q9Y6Q3 630 aaPredicted RBP18.62■□□□□ 0.57
CPSF4-203ENST00000430038 TSC2P49815 1807 aa18.62■□□□□ 0.57
CPSF4-203ENST00000430038 A0A087X0B3 334 aa18.61■□□□□ 0.57
CPSF4-203ENST00000430038 SHISA7A6NL88 538 aa18.61■□□□□ 0.57
CPSF4-203ENST00000430038 SPTLC1O15269 473 aa18.61■□□□□ 0.57
CPSF4-203ENST00000430038 OGTO15294 1046 aa18.61■□□□□ 0.57
CPSF4-203ENST00000430038 GFRA3O60609 400 aa18.61■□□□□ 0.57
CPSF4-203ENST00000430038 MOSPD3O75425 235 aa18.61■□□□□ 0.57
CPSF4-203ENST00000430038 NBL1P41271 181 aa18.61■□□□□ 0.57
CPSF4-203ENST00000430038 AARSP49588 968 aaKnown RBP eCLIP18.61■□□□□ 0.573e-6■■■■■ 61.8
CPSF4-203ENST00000430038 LIG4P49917 911 aa18.61■□□□□ 0.57
CPSF4-203ENST00000430038 CEBPZQ03701 1054 aaKnown RBP18.61■□□□□ 0.57
CPSF4-203ENST00000430038 KCNA1Q09470 495 aa18.61■□□□□ 0.57
CPSF4-203ENST00000430038 SNW1Q13573 536 aaKnown RBP18.61■□□□□ 0.57
CPSF4-203ENST00000430038 SCARA3Q6AZY7 606 aa18.61■□□□□ 0.57
CPSF4-203ENST00000430038 FRMD5Q7Z6J6 570 aa18.61■□□□□ 0.57
CPSF4-203ENST00000430038 ZSWIM2Q8NEG5 633 aa18.61■□□□□ 0.57
CPSF4-203ENST00000430038 RTP3Q9BQQ7 232 aa18.61■□□□□ 0.57
CPSF4-203ENST00000430038 ZHX3Q9H4I2 956 aa18.61■□□□□ 0.57
CPSF4-203ENST00000430038 ARHGEF3Q9NR81 526 aa18.61■□□□□ 0.57
CPSF4-203ENST00000430038 FOXD4L1Q9NU39 408 aa18.61■□□□□ 0.57
CPSF4-203ENST00000430038 CPSF3Q9UKF6 684 aaKnown RBP18.61■□□□□ 0.57
CPSF4-203ENST00000430038 PCDHB8Q9UN66 801 aa18.61■□□□□ 0.57
CPSF4-203ENST00000430038 MTF2Q9Y483 593 aaPredicted RBP18.61■□□□□ 0.57
CPSF4-203ENST00000430038 FANCMQ8IYD8 2048 aa18.61■□□□□ 0.57
CPSF4-203ENST00000430038 MYMKA6NI61 221 aa18.6■□□□□ 0.57
CPSF4-203ENST00000430038 STK25O00506 426 aa18.6■□□□□ 0.57
CPSF4-203ENST00000430038 HNRNPDLO14979 420 aaKnown RBP18.6■□□□□ 0.57
CPSF4-203ENST00000430038 PTPN2P17706 415 aa18.6■□□□□ 0.57
CPSF4-203ENST00000430038 ACOT2P49753 483 aa18.6■□□□□ 0.57
CPSF4-203ENST00000430038 CDR1P51861 262 aa18.6■□□□□ 0.57
CPSF4-203ENST00000430038 ADCY1Q08828 1119 aa18.6■□□□□ 0.57
CPSF4-203ENST00000430038 ANGPT1Q15389 498 aa18.6■□□□□ 0.57
CPSF4-203ENST00000430038 TANGO2Q6ICL3 276 aa18.6■□□□□ 0.57
CPSF4-203ENST00000430038 JADE1Q6IE81 842 aa18.6■□□□□ 0.57
CPSF4-203ENST00000430038 RTL10Q7L3V2 364 aa18.6■□□□□ 0.57
CPSF4-203ENST00000430038 DYMQ7RTS9 669 aa18.6■□□□□ 0.57
CPSF4-203ENST00000430038 MAP4K3Q8IVH8 894 aa18.6■□□□□ 0.57
CPSF4-203ENST00000430038 DNAJC19Q96DA6 116 aa18.6■□□□□ 0.57
CPSF4-203ENST00000430038 ZSWIM3Q96MP5 696 aa18.6■□□□□ 0.57
CPSF4-203ENST00000430038 TMEM209Q96SK2 561 aa18.6■□□□□ 0.57
CPSF4-203ENST00000430038 CORO1BQ9BR76 489 aa18.6■□□□□ 0.57
CPSF4-203ENST00000430038 STRA6Q9BX79 667 aa18.6■□□□□ 0.57
CPSF4-203ENST00000430038 AVENQ9NQS1 362 aaPredicted RBP18.6■□□□□ 0.57
CPSF4-203ENST00000430038 KCNH3Q9ULD8 1083 aa18.6■□□□□ 0.57
CPSF4-203ENST00000430038 MTMR6Q9Y217 621 aa18.6■□□□□ 0.57
CPSF4-203ENST00000430038 MRPS23Q9Y3D9 190 aaKnown RBP18.6■□□□□ 0.57
CPSF4-203ENST00000430038 SRPRBQ9Y5M8 271 aaKnown RBP18.6■□□□□ 0.57
CPSF4-203ENST00000430038 INSL5Q9Y5Q6 135 aa18.6■□□□□ 0.57
CPSF4-203ENST00000430038 TCHHQ07283 1943 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms