RNA–Protein interactions for RNA: ENST00000429801.5

NUP98-207, Transcript of nucleoporin 98, humanhuman

TSL 1 (best)

Gene NUP98, Length 2,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-207ENST00000429801 TGFB1I1O43294 461 aa9.34□□□□□ -0.91
NUP98-207ENST00000429801 GNA14O95837 355 aa9.34□□□□□ -0.91
NUP98-207ENST00000429801 SYF2O95926 243 aaKnown RBP9.34□□□□□ -0.91
NUP98-207ENST00000429801 SERPINC1P01008 464 aa9.34□□□□□ -0.91
NUP98-207ENST00000429801 ATP1A3P13637 1013 aa9.34□□□□□ -0.91
NUP98-207ENST00000429801 EEF1GP26641 437 aaKnown RBP9.34□□□□□ -0.91
NUP98-207ENST00000429801 HOXC8P31273 242 aa9.34□□□□□ -0.91
NUP98-207ENST00000429801 LBX1P52954 281 aa9.34□□□□□ -0.91
NUP98-207ENST00000429801 ACLYP53396 1101 aa9.34□□□□□ -0.91
NUP98-207ENST00000429801 ADAM17P78536 824 aa9.34□□□□□ -0.91
NUP98-207ENST00000429801 PPP2R3AQ06190 1150 aa9.34□□□□□ -0.91
NUP98-207ENST00000429801 ADAM9Q13443 819 aa9.34□□□□□ -0.91
NUP98-207ENST00000429801 CASP8Q14790 479 aa9.34□□□□□ -0.91
NUP98-207ENST00000429801 BRD3Q15059 726 aa9.34□□□□□ -0.91
NUP98-207ENST00000429801 HSP90AA4PQ58FG1 418 aa9.34□□□□□ -0.91
NUP98-207ENST00000429801 FBXO46Q6PJ61 603 aaPredicted RBP9.34□□□□□ -0.91
NUP98-207ENST00000429801 SESTD1Q86VW0 696 aa9.34□□□□□ -0.91
NUP98-207ENST00000429801 FUKQ8N0W3 1084 aa9.34□□□□□ -0.91
NUP98-207ENST00000429801 RIN2Q8WYP3 895 aaPredicted RBP9.34□□□□□ -0.91
NUP98-207ENST00000429801 VTI1AQ96AJ9 217 aa9.34□□□□□ -0.91
NUP98-207ENST00000429801 GLT1D1Q96MS3 346 aa9.34□□□□□ -0.91
NUP98-207ENST00000429801 NFKBIZQ9BYH8 718 aa9.34□□□□□ -0.91
NUP98-207ENST00000429801 PAK6Q9NQU5 681 aaPredicted RBP9.34□□□□□ -0.91
NUP98-207ENST00000429801 KIAA1522Q9P206 1035 aaPredicted RBP9.34□□□□□ -0.91
NUP98-207ENST00000429801 GTF2IRD1Q9UHL9 959 aa9.34□□□□□ -0.91
NUP98-207ENST00000429801 C2CD2Q9Y426 696 aa9.34□□□□□ -0.91
NUP98-207ENST00000429801 GRIN2DO15399 1336 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 ZMYM2Q9UBW7 1377 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 LRRIQ3A6PVS8 624 aaPredicted RBP9.33□□□□□ -0.92
NUP98-207ENST00000429801 KCNJ18B7U540 433 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 KBTBD13C9JR72 458 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 ATP9BO43861 1147 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 CEP104O60308 925 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 HSPA1AP0DMV8 641 aaKnown RBP9.33□□□□□ -0.92
NUP98-207ENST00000429801 HSPA1BP0DMV9 641 aaKnown RBP9.33□□□□□ -0.92
NUP98-207ENST00000429801 CYP2C9P11712 490 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 NR2F2P24468 414 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 PHKA2P46019 1235 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 KCNJ12Q14500 433 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 TCP11X2Q5H9J9 407 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 TAF2Q6P1X5 1199 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 CCDC50Q8IVM0 306 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 KIAA0319LQ8IZA0 1049 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 RABGGTAQ92696 567 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 NLRP4Q96MN2 994 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 PNKPQ96T60 521 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 RNF208Q9H0X6 261 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 AASDHPPTQ9NRN7 309 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 AGPAT3Q9NRZ7 376 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 KAT6AQ92794 2004 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 TREHO43280 583 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 CBFA2T2O43439 604 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 NR3C1P04150 777 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 RPLP2P05387 115 aaKnown RBP9.33□□□□□ -0.92
NUP98-207ENST00000429801 VDRP11473 427 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 CCL5P13501 91 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 SLC8A1P32418 973 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 HOXD12P35452 270 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 OXCT1P55809 520 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 PTENP60484 403 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 FANCCQ00597 558 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 PTPN11Q06124 597 aaPredicted RBP9.33□□□□□ -0.92
NUP98-207ENST00000429801 BLMHQ13867 455 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 MAPK6Q16659 721 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 FAM47CQ5HY64 1035 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 TRIM65Q6PJ69 517 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 LRRC55Q6ZSA7 311 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 ZNF410Q86VK4 478 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 ZC3H3Q8IXZ2 948 aaKnown RBP9.33□□□□□ -0.92
NUP98-207ENST00000429801 TMEM174Q8WUU8 243 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 BHMTQ93088 406 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 FAM167BQ9BTA0 163 aa9.33□□□□□ -0.92
NUP98-207ENST00000429801 ATXN2Q99700 1313 aaKnown RBP9.32□□□□□ -0.92
NUP98-207ENST00000429801 DPPA5A6NC42 116 aa9.32□□□□□ -0.92
NUP98-207ENST00000429801 HNRNPDLO14979 420 aaKnown RBP9.32□□□□□ -0.92
NUP98-207ENST00000429801 CLIC2O15247 247 aa9.32□□□□□ -0.92
NUP98-207ENST00000429801 VTNP04004 478 aa9.32□□□□□ -0.92
NUP98-207ENST00000429801 GJB1P08034 283 aa9.32□□□□□ -0.92
NUP98-207ENST00000429801 TRIM21P19474 475 aaKnown RBP9.32□□□□□ -0.92
NUP98-207ENST00000429801 UBASH3AP57075 661 aa9.32□□□□□ -0.92
NUP98-207ENST00000429801 ITGA7Q13683 1181 aa9.32□□□□□ -0.92
NUP98-207ENST00000429801 MTFR1Q15390 333 aa9.32□□□□□ -0.92
NUP98-207ENST00000429801 ZNF362Q5T0B9 420 aaPredicted RBP9.32□□□□□ -0.92
NUP98-207ENST00000429801 CCDC121Q6ZUS5 278 aa9.32□□□□□ -0.92
NUP98-207ENST00000429801 IRF2BP1Q8IU81 584 aa9.32□□□□□ -0.92
NUP98-207ENST00000429801 SLC9A9Q8IVB4 645 aa9.32□□□□□ -0.92
NUP98-207ENST00000429801 WDR75Q8IWA0 830 aaKnown RBP9.32□□□□□ -0.92
NUP98-207ENST00000429801 C12orf56Q8IXR9 622 aa9.32□□□□□ -0.92
NUP98-207ENST00000429801 PEX5LQ8IYB4 626 aa9.32□□□□□ -0.92
NUP98-207ENST00000429801 CCDC170Q8IYT3 715 aa9.32□□□□□ -0.92
NUP98-207ENST00000429801 ZBTB8BQ8NAP8 495 aaPredicted RBP9.32□□□□□ -0.92
NUP98-207ENST00000429801 TEKT4Q8WW24 435 aa9.32□□□□□ -0.92
NUP98-207ENST00000429801 NLRP7Q8WX94 980 aa9.32□□□□□ -0.92
NUP98-207ENST00000429801 DEFB118Q96PH6 123 aa9.32□□□□□ -0.92
NUP98-207ENST00000429801 FAM49AQ9H0Q0 323 aaPredicted RBP9.32□□□□□ -0.92
NUP98-207ENST00000429801 EBF2Q9HAK2 575 aa9.32□□□□□ -0.92
NUP98-207ENST00000429801 ABCF3Q9NUQ8 709 aa9.32□□□□□ -0.92
NUP98-207ENST00000429801 HAUS2Q9NVX0 235 aa9.32□□□□□ -0.92
NUP98-207ENST00000429801 WDR35Q9P2L0 1181 aa9.32□□□□□ -0.92
NUP98-207ENST00000429801 LIMA1Q9UHB6 759 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms