RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 LRPAP1P30533 357 aa18.37■□□□□ 0.53
LINC00887-203ENST00000429578 POLR2BP30876 1174 aaKnown RBP18.37■□□□□ 0.53
LINC00887-203ENST00000429578 MYL6P60660 151 aa18.37■□□□□ 0.53
LINC00887-203ENST00000429578 DEFB103AP81534 67 aa18.37■□□□□ 0.53
LINC00887-203ENST00000429578 RBP5P82980 135 aa18.37■□□□□ 0.53
LINC00887-203ENST00000429578 SGSM1Q2NKQ1 1148 aa18.37■□□□□ 0.53
LINC00887-203ENST00000429578 TMEM130Q8N3G9 435 aa18.37■□□□□ 0.53
LINC00887-203ENST00000429578 CCDC150Q8NCX0 1101 aa18.37■□□□□ 0.53
LINC00887-203ENST00000429578 IQCDQ96DY2 449 aa18.37■□□□□ 0.53
LINC00887-203ENST00000429578 IMPG2Q9BZV3 1241 aa18.37■□□□□ 0.53
LINC00887-203ENST00000429578 APEX2Q9UBZ4 518 aa18.37■□□□□ 0.53
LINC00887-203ENST00000429578 AGAP1Q9UPQ3 857 aa18.37■□□□□ 0.53
LINC00887-203ENST00000429578 R3HCC1Q9Y3T6 440 aaKnown RBP18.37■□□□□ 0.53
LINC00887-203ENST00000429578 ANO9A1A5B4 782 aa18.36■□□□□ 0.53
LINC00887-203ENST00000429578 DGKIO75912 1065 aa18.36■□□□□ 0.53
LINC00887-203ENST00000429578 NOL4O94818 638 aa18.36■□□□□ 0.53
LINC00887-203ENST00000429578 UPP2O95045 317 aa18.36■□□□□ 0.53
LINC00887-203ENST00000429578 APBA1Q02410 837 aa18.36■□□□□ 0.53
LINC00887-203ENST00000429578 TRIM14Q14142 442 aa18.36■□□□□ 0.53
LINC00887-203ENST00000429578 WDR44Q5JSH3 913 aa18.36■□□□□ 0.53
LINC00887-203ENST00000429578 KLHDC7AQ5VTJ3 777 aa18.36■□□□□ 0.53
LINC00887-203ENST00000429578 C9orf57Q5W0N0 161 aa18.36■□□□□ 0.53
LINC00887-203ENST00000429578 SPC24Q8NBT2 197 aa18.36■□□□□ 0.53
LINC00887-203ENST00000429578 TAF4BQ92750 862 aa18.36■□□□□ 0.53
LINC00887-203ENST00000429578 RNPC3Q96LT9 517 aaKnown RBP18.36■□□□□ 0.53
LINC00887-203ENST00000429578 CASD1Q96PB1 797 aa18.36■□□□□ 0.53
LINC00887-203ENST00000429578 PI4K2AQ9BTU6 479 aa18.36■□□□□ 0.53
LINC00887-203ENST00000429578 TTYH3Q9C0H2 523 aa18.36■□□□□ 0.53
LINC00887-203ENST00000429578 GOLGA2P5Q9HBQ8 144 aa18.36■□□□□ 0.53
LINC00887-203ENST00000429578 TBC1D13Q9NVG8 400 aa18.36■□□□□ 0.53
LINC00887-203ENST00000429578 IMPACTQ9P2X3 320 aa18.36■□□□□ 0.53
LINC00887-203ENST00000429578 FBXL5Q9UKA1 691 aa18.36■□□□□ 0.53
LINC00887-203ENST00000429578 KIAA1671Q9BY89 1806 aa18.36■□□□□ 0.53
LINC00887-203ENST00000429578 PIRO00625 290 aa18.35■□□□□ 0.53
LINC00887-203ENST00000429578 EPHB6O15197 1021 aa18.35■□□□□ 0.53
LINC00887-203ENST00000429578 UCHL3P15374 230 aa18.35■□□□□ 0.53
LINC00887-203ENST00000429578 ATICP31939 592 aa18.35■□□□□ 0.53
LINC00887-203ENST00000429578 TBX2Q13207 712 aaPredicted RBP18.35■□□□□ 0.53
LINC00887-203ENST00000429578 TUSC3Q13454 348 aa18.35■□□□□ 0.53
LINC00887-203ENST00000429578 FAM109BQ6ICB4 259 aaPredicted RBP18.35■□□□□ 0.53
LINC00887-203ENST00000429578 PHLDB3Q6NSJ2 640 aa18.35■□□□□ 0.53
LINC00887-203ENST00000429578 LRRC52Q8N7C0 313 aa18.35■□□□□ 0.53
LINC00887-203ENST00000429578 HERVK_113Q902F9 699 aa18.35■□□□□ 0.53
LINC00887-203ENST00000429578 NT5C1BQ96P26 610 aa18.35■□□□□ 0.53
LINC00887-203ENST00000429578 MRPL9Q9BYD2 267 aaKnown RBP18.35■□□□□ 0.53
LINC00887-203ENST00000429578 XYLT2Q9H1B5 865 aa18.35■□□□□ 0.53
LINC00887-203ENST00000429578 GANQ9H2C0 597 aa18.35■□□□□ 0.53
LINC00887-203ENST00000429578 VRTNQ9H8Y1 702 aa18.35■□□□□ 0.53
LINC00887-203ENST00000429578 DAAM1Q9Y4D1 1078 aa18.35■□□□□ 0.53
LINC00887-203ENST00000429578 ZBBXA8MT70 800 aa18.35■□□□□ 0.53
LINC00887-203ENST00000429578 STAU1O95793 577 aaKnown RBP18.35■□□□□ 0.53
LINC00887-203ENST00000429578 GYPCP04921 128 aa18.35■□□□□ 0.53
LINC00887-203ENST00000429578 RFX1P22670 979 aa18.35■□□□□ 0.53
LINC00887-203ENST00000429578 GATMP50440 423 aa18.35■□□□□ 0.53
LINC00887-203ENST00000429578 NOP14P78316 857 aaKnown RBP18.35■□□□□ 0.53
LINC00887-203ENST00000429578 CCDC173Q0VFZ6 552 aa18.35■□□□□ 0.53
LINC00887-203ENST00000429578 LRMPQ12912 555 aa18.35■□□□□ 0.53
LINC00887-203ENST00000429578 ZNF699Q32M78 642 aa18.35■□□□□ 0.53
LINC00887-203ENST00000429578 GBF1Q92538 1859 aa18.35■□□□□ 0.53
LINC00887-203ENST00000429578 EDEM3Q9BZQ6 932 aa18.35■□□□□ 0.53
LINC00887-203ENST00000429578 CEP72Q9P209 647 aa18.35■□□□□ 0.53
LINC00887-203ENST00000429578 COL6A3P12111 3177 aa18.34■□□□□ 0.53
LINC00887-203ENST00000429578 A0A1W2PQJ5 194 aa18.34■□□□□ 0.53
LINC00887-203ENST00000429578 RPL9P32969 192 aaKnown RBP18.34■□□□□ 0.53
LINC00887-203ENST00000429578 POLR2FP61218 127 aaKnown RBP18.34■□□□□ 0.53
LINC00887-203ENST00000429578 RNASELQ05823 741 aaKnown RBP18.34■□□□□ 0.53
LINC00887-203ENST00000429578 DSC1Q08554 894 aa18.34■□□□□ 0.53
LINC00887-203ENST00000429578 MYO1EQ12965 1108 aa18.34■□□□□ 0.53
LINC00887-203ENST00000429578 ZNF697Q5TEC3 545 aa18.34■□□□□ 0.53
LINC00887-203ENST00000429578 SPOPLQ6IQ16 392 aa18.34■□□□□ 0.53
LINC00887-203ENST00000429578 PPFIBP1Q86W92 1011 aa18.34■□□□□ 0.53
LINC00887-203ENST00000429578 DDX27Q96GQ7 796 aaKnown RBP18.34■□□□□ 0.53
LINC00887-203ENST00000429578 HPDLQ96IR7 371 aa18.34■□□□□ 0.53
LINC00887-203ENST00000429578 FAM161BQ96MY7 647 aa18.34■□□□□ 0.53
LINC00887-203ENST00000429578 UROC1Q96N76 676 aa18.34■□□□□ 0.53
LINC00887-203ENST00000429578 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.34■□□□□ 0.53
LINC00887-203ENST00000429578 TBKBP1A7MCY6 615 aa18.33■□□□□ 0.52
LINC00887-203ENST00000429578 PPEF2O14830 753 aa18.33■□□□□ 0.52
LINC00887-203ENST00000429578 DDHD2O94830 711 aa18.33■□□□□ 0.52
LINC00887-203ENST00000429578 TPM1P09493 284 aa18.33■□□□□ 0.52
LINC00887-203ENST00000429578 CASP14P31944 242 aa18.33■□□□□ 0.52
LINC00887-203ENST00000429578 PNPLA4P41247 253 aa18.33■□□□□ 0.52
LINC00887-203ENST00000429578 CLCNKBP51801 687 aa18.33■□□□□ 0.52
LINC00887-203ENST00000429578 SMAD3P84022 425 aaKnown RBP18.33■□□□□ 0.52
LINC00887-203ENST00000429578 UPP1Q16831 310 aa18.33■□□□□ 0.52
LINC00887-203ENST00000429578 GJB7Q6PEY0 223 aa18.33■□□□□ 0.52
LINC00887-203ENST00000429578 CACNA2D4Q7Z3S7 1137 aa18.33■□□□□ 0.52
LINC00887-203ENST00000429578 ZNF280BQ86YH2 543 aa18.33■□□□□ 0.52
LINC00887-203ENST00000429578 ARHGEF19Q8IW93 802 aa18.33■□□□□ 0.52
LINC00887-203ENST00000429578 PPM1KQ8N3J5 372 aa18.33■□□□□ 0.52
LINC00887-203ENST00000429578 TATDN2Q93075 761 aa18.33■□□□□ 0.52
LINC00887-203ENST00000429578 ELMO3Q96BJ8 720 aa18.33■□□□□ 0.52
LINC00887-203ENST00000429578 ZNF689Q96CS4 500 aaPredicted RBP18.33■□□□□ 0.52
LINC00887-203ENST00000429578 FAXDC2Q96IV6 333 aa18.33■□□□□ 0.52
LINC00887-203ENST00000429578 FAM81BQ96LP2 452 aa18.33■□□□□ 0.52
LINC00887-203ENST00000429578 ZNF560Q96MR9 790 aa18.33■□□□□ 0.52
LINC00887-203ENST00000429578 FAM193BQ96PV7 902 aaPredicted RBP18.33■□□□□ 0.52
LINC00887-203ENST00000429578 PPP1R9BQ96SB3 815 aa18.33■□□□□ 0.52
LINC00887-203ENST00000429578 NAA15Q9BXJ9 866 aaKnown RBP18.33■□□□□ 0.52
LINC00887-203ENST00000429578 MTIF3Q9H2K0 278 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms