RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 FAM117BQ6P1L5 589 aa9.4□□□□□ -0.9
CTNND1-208ENST00000428599 GLB1LQ6UWU2 654 aa9.4□□□□□ -0.9
CTNND1-208ENST00000428599 ZNF555Q8NEP9 628 aa9.4□□□□□ -0.9
CTNND1-208ENST00000428599 ZNF512BQ96KM6 892 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-208ENST00000428599 WNT8AQ9H1J5 351 aa9.4□□□□□ -0.9
CTNND1-208ENST00000428599 JPH1Q9HDC5 661 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-208ENST00000428599 HDAC6Q9UBN7 1215 aa9.4□□□□□ -0.9
CTNND1-208ENST00000428599 SPACA6W5XKT8 324 aa9.4□□□□□ -0.9
CTNND1-208ENST00000428599 KDM4FA0A1W2PPD8 638 aa9.4□□□□□ -0.9
CTNND1-208ENST00000428599 DYRK3O43781 588 aa9.4□□□□□ -0.9
CTNND1-208ENST00000428599 RPS6KA5O75582 802 aa9.4□□□□□ -0.9
CTNND1-208ENST00000428599 APOA4P06727 396 aa9.4□□□□□ -0.9
CTNND1-208ENST00000428599 TMEM132BQ14DG7 1078 aa9.4□□□□□ -0.9
CTNND1-208ENST00000428599 HIST2H2ACQ16777 129 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-208ENST00000428599 HIST2H2AA3Q6FI13 130 aa9.4□□□□□ -0.9
CTNND1-208ENST00000428599 CEP70Q8NHQ1 597 aa9.4□□□□□ -0.9
CTNND1-208ENST00000428599 ELAC2Q9BQ52 826 aaKnown RBP9.4□□□□□ -0.9
CTNND1-208ENST00000428599 TSEN34Q9BSV6 310 aaKnown RBP9.4□□□□□ -0.9
CTNND1-208ENST00000428599 PVALEFA0A1B0GWK0 134 aa9.4□□□□□ -0.91
CTNND1-208ENST00000428599 CD4P01730 458 aa9.4□□□□□ -0.91
CTNND1-208ENST00000428599 CHGBP05060 677 aa9.4□□□□□ -0.91
CTNND1-208ENST00000428599 GUCA1AP43080 201 aaPredicted RBP9.4□□□□□ -0.91
CTNND1-208ENST00000428599 RGS4P49798 205 aa9.4□□□□□ -0.91
CTNND1-208ENST00000428599 COG2Q14746 738 aa9.4□□□□□ -0.91
CTNND1-208ENST00000428599 IRAK1BP1Q5VVH5 260 aa9.4□□□□□ -0.91
CTNND1-208ENST00000428599 STOX1Q6ZVD7 989 aa9.4□□□□□ -0.91
CTNND1-208ENST00000428599 KDELC2Q7Z4H8 507 aa9.4□□□□□ -0.91
CTNND1-208ENST00000428599 ZC3H18Q86VM9 953 aaKnown RBP9.4□□□□□ -0.91
CTNND1-208ENST00000428599 NT5DC4Q86YG4 428 aa9.4□□□□□ -0.91
CTNND1-208ENST00000428599 BBS7Q8IWZ6 715 aa9.4□□□□□ -0.91
CTNND1-208ENST00000428599 ZBED8Q8IZ13 594 aa9.4□□□□□ -0.91
CTNND1-208ENST00000428599 KRT78Q8N1N4 520 aa9.4□□□□□ -0.91
CTNND1-208ENST00000428599 ZNF280CQ8ND82 737 aa9.4□□□□□ -0.91
CTNND1-208ENST00000428599 RFWD2Q8NHY2 731 aa9.4□□□□□ -0.91
CTNND1-208ENST00000428599 SAAL1Q96ER3 474 aa9.4□□□□□ -0.91
CTNND1-208ENST00000428599 SNF8Q96H20 258 aa9.4□□□□□ -0.91
CTNND1-208ENST00000428599 DYNC1LI2O43237 492 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-208ENST00000428599 BRAFP15056 766 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 SERPINB10P48595 397 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 ARFIP2P53365 341 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 NCKAP1LP55160 1127 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 HIBCHQ6NVY1 386 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-208ENST00000428599 ANO5Q75V66 913 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 CYFIP1Q7L576 1253 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 SAMD7Q7Z3H4 446 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 FAM151AQ8WW52 585 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 TIPINQ9BVW5 301 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 ZFATQ9P243 1243 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 KDM6AO15550 1401 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-208ENST00000428599 POLR1AO95602 1720 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-208ENST00000428599 H0Y626 953 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 TRIM16O95361 564 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 TDP2O95551 362 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 ATP1A1P05023 1023 aaKnown RBP9.39□□□□□ -0.91
CTNND1-208ENST00000428599 TRPC1P48995 793 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 HARS2P49590 506 aaKnown RBP9.39□□□□□ -0.91
CTNND1-208ENST00000428599 MGAT5BQ3V5L5 792 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 SBK1Q52WX2 424 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 RPAINQ86UA6 219 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 SRBD1Q8N5C6 995 aaKnown RBP9.39□□□□□ -0.91
CTNND1-208ENST00000428599 UCMAQ8WVF2 138 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 THOC1Q96FV9 657 aaKnown RBP9.39□□□□□ -0.91
CTNND1-208ENST00000428599 IPPQ9Y573 584 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 PPLO60437 1756 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 CCDC22O60826 627 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 KCNH2Q12809 1159 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 SLC13A1Q9BZW2 595 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 TMEM39BQ9GZU3 492 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 POLD4Q9HCU8 107 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 ARHGEF38Q9NXL2 777 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 POTEFA5A3E0 1075 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 H2AFYO75367 372 aaKnown RBP9.39□□□□□ -0.91
CTNND1-208ENST00000428599 NDUFB10O96000 172 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 POTEIP0CG38 1075 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 EPB42P16452 691 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 PMS2P54278 862 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 UGP2Q16851 508 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 POTEGQ6S5H5 508 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 POTEEQ6S8J3 1075 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 ZNF507Q8TCN5 953 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 GOLPH3LQ9H4A5 285 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 DMAP1Q9NPF5 467 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-208ENST00000428599 WDR47O94967 919 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 DEPDC1Q5TB30 811 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 PTRHD1Q6GMV3 140 aaKnown RBP9.39□□□□□ -0.91
CTNND1-208ENST00000428599 SLC7A14Q8TBB6 771 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 LPAR1Q92633 364 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 CATSPERBQ9H7T0 1116 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 MPP6Q9NZW5 540 aa9.39□□□□□ -0.91
CTNND1-208ENST00000428599 C19orf81C9J6K1 198 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 GGPS1O95749 300 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 STAG3L1P0CL83 205 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 RPS12P25398 132 aaKnown RBP9.38□□□□□ -0.91
CTNND1-208ENST00000428599 ZNF543Q08ER8 600 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 TMEM132DQ14C87 1099 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 SV2CQ496J9 727 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 BEND6Q5SZJ8 279 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-208ENST00000428599 ERAP2Q6P179 960 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 FAM47EQ6ZV65 393 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 ARHGAP18Q8N392 663 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms