RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 ZFRQ96KR1 1074 aaKnown RBP17.02■□□□□ 0.32
C9orf3-206ENST00000428313 POP1Q99575 1024 aaKnown RBP17.02■□□□□ 0.32
C9orf3-206ENST00000428313 FOXP3Q9BZS1 431 aa17.02■□□□□ 0.32
C9orf3-206ENST00000428313 KIAA1586Q9HCI6 787 aa17.02■□□□□ 0.32
C9orf3-206ENST00000428313 C6orf50Q9HD87 102 aa17.02■□□□□ 0.32
C9orf3-206ENST00000428313 ARPP21Q9UBL0 812 aaPredicted RBP17.02■□□□□ 0.32
C9orf3-206ENST00000428313 SLC16A3O15427 465 aaKnown RBP17.01■□□□□ 0.31
C9orf3-206ENST00000428313 TGDSO95455 350 aa17.01■□□□□ 0.31
C9orf3-206ENST00000428313 ALDH2P05091 517 aa17.01■□□□□ 0.31
C9orf3-206ENST00000428313 FGFR1P11362 822 aa17.01■□□□□ 0.31
C9orf3-206ENST00000428313 ATF2P15336 505 aa17.01■□□□□ 0.31
C9orf3-206ENST00000428313 TNFAIP3P21580 790 aa17.01■□□□□ 0.31
C9orf3-206ENST00000428313 FUT4P22083 530 aa17.01■□□□□ 0.31
C9orf3-206ENST00000428313 PDCD4Q53EL6 469 aaKnown RBP17.01■□□□□ 0.31
C9orf3-206ENST00000428313 KLHL35Q6PF15 583 aa17.01■□□□□ 0.31
C9orf3-206ENST00000428313 Q6ZNX1 250 aa17.01■□□□□ 0.31
C9orf3-206ENST00000428313 LARGE2Q8N3Y3 721 aa17.01■□□□□ 0.31
C9orf3-206ENST00000428313 CFAP57Q96MR6 1250 aa17.01■□□□□ 0.31
C9orf3-206ENST00000428313 TTC1Q99614 292 aa17.01■□□□□ 0.31
C9orf3-206ENST00000428313 PPCSQ9HAB8 311 aa17.01■□□□□ 0.31
C9orf3-206ENST00000428313 ARHGEF4Q9NR80 690 aa17.01■□□□□ 0.31
C9orf3-206ENST00000428313 MAD2L2Q9UI95 211 aa17.01■□□□□ 0.31
C9orf3-206ENST00000428313 DCTN4Q9UJW0 460 aa17.01■□□□□ 0.31
C9orf3-206ENST00000428313 NR2E3Q9Y5X4 410 aa17.01■□□□□ 0.31
C9orf3-206ENST00000428313 EXOC1LA0A1B0GW35 172 aa17.01■□□□□ 0.31
C9orf3-206ENST00000428313 ZBED4O75132 1171 aa17.01■□□□□ 0.31
C9orf3-206ENST00000428313 MTA2O94776 668 aa17.01■□□□□ 0.31
C9orf3-206ENST00000428313 BAG2O95816 211 aa17.01■□□□□ 0.31
C9orf3-206ENST00000428313 GCAP28676 217 aa17.01■□□□□ 0.31
C9orf3-206ENST00000428313 NT5C2P49902 561 aa17.01■□□□□ 0.31
C9orf3-206ENST00000428313 GEMIN4P57678 1058 aaKnown RBP17.01■□□□□ 0.31
C9orf3-206ENST00000428313 ZBTB16Q05516 673 aa17.01■□□□□ 0.31
C9orf3-206ENST00000428313 NKX1-1Q15270 411 aaPredicted RBP17.01■□□□□ 0.31
C9orf3-206ENST00000428313 RASA2Q15283 850 aa17.01■□□□□ 0.31
C9orf3-206ENST00000428313 FAM47AQ5JRC9 791 aa17.01■□□□□ 0.31
C9orf3-206ENST00000428313 GRAMD4Q6IC98 578 aa17.01■□□□□ 0.31
C9orf3-206ENST00000428313 KYAT3Q6YP21 454 aaKnown RBP17.01■□□□□ 0.31
C9orf3-206ENST00000428313 TRIM67Q6ZTA4 783 aa17.01■□□□□ 0.31
C9orf3-206ENST00000428313 DHDDSQ86SQ9 333 aa17.01■□□□□ 0.31
C9orf3-206ENST00000428313 DQX1Q8TE96 717 aaKnown RBP17.01■□□□□ 0.31
C9orf3-206ENST00000428313 TBCKQ8TEA7 893 aa17.01■□□□□ 0.31
C9orf3-206ENST00000428313 BTBD9Q96Q07 612 aa17.01■□□□□ 0.31
C9orf3-206ENST00000428313 DNAJC17Q9NVM6 304 aaKnown RBP17.01■□□□□ 0.31
C9orf3-206ENST00000428313 TBC1D7Q9P0N9 293 aa17.01■□□□□ 0.31
C9orf3-206ENST00000428313 PPM1HQ9ULR3 514 aa17.01■□□□□ 0.31
C9orf3-206ENST00000428313 CACNA1SQ13698 1873 aa17■□□□□ 0.31
C9orf3-206ENST00000428313 MAGEB3O15480 346 aa17■□□□□ 0.31
C9orf3-206ENST00000428313 PDE5AO76074 875 aa17■□□□□ 0.31
C9orf3-206ENST00000428313 COMTP21964 271 aa17■□□□□ 0.31
C9orf3-206ENST00000428313 RAB15P59190 212 aa17■□□□□ 0.31
C9orf3-206ENST00000428313 PLCB3Q01970 1234 aa17■□□□□ 0.31
C9orf3-206ENST00000428313 MSLNQ13421 630 aaPredicted RBP17■□□□□ 0.31
C9orf3-206ENST00000428313 MAPK6Q16659 721 aa17■□□□□ 0.31
C9orf3-206ENST00000428313 DNAL1Q4LDG9 190 aa17■□□□□ 0.31
C9orf3-206ENST00000428313 EAPPQ56P03 285 aaPredicted RBP17■□□□□ 0.31
C9orf3-206ENST00000428313 LRRC8BQ6P9F7 803 aa17■□□□□ 0.31
C9orf3-206ENST00000428313 GJB7Q6PEY0 223 aa17■□□□□ 0.31
C9orf3-206ENST00000428313 LVRNQ6Q4G3 990 aa17■□□□□ 0.31
C9orf3-206ENST00000428313 DGKHQ86XP1 1220 aa17■□□□□ 0.31
C9orf3-206ENST00000428313 ARHGEF1Q92888 912 aaKnown RBP17■□□□□ 0.31
C9orf3-206ENST00000428313 KLHL4Q9C0H6 718 aa17■□□□□ 0.31
C9orf3-206ENST00000428313 PFDN4Q9NQP4 134 aa17■□□□□ 0.31
C9orf3-206ENST00000428313 DDX18Q9NVP1 670 aaKnown RBP17■□□□□ 0.31
C9orf3-206ENST00000428313 THEGQ9P2T0 379 aa17■□□□□ 0.31
C9orf3-206ENST00000428313 PLA2G4CQ9UP65 541 aa17■□□□□ 0.31
C9orf3-206ENST00000428313 R3HDM2Q9Y2K5 976 aaKnown RBP17■□□□□ 0.31
C9orf3-206ENST00000428313 A0A0G2JND7 137 aa17■□□□□ 0.31
C9orf3-206ENST00000428313 HTR3EA5X5Y0 456 aa17■□□□□ 0.31
C9orf3-206ENST00000428313 FSCN2O14926 492 aa17■□□□□ 0.31
C9orf3-206ENST00000428313 TPD52L2O43399 206 aaKnown RBP17■□□□□ 0.31
C9orf3-206ENST00000428313 TOM1O60784 492 aa17■□□□□ 0.31
C9orf3-206ENST00000428313 CBFA2T3O75081 653 aa17■□□□□ 0.31
C9orf3-206ENST00000428313 NAPAP54920 295 aa17■□□□□ 0.31
C9orf3-206ENST00000428313 UBE4AQ14139 1066 aa17■□□□□ 0.31
C9orf3-206ENST00000428313 DLGAP5Q15398 846 aa17■□□□□ 0.31
C9orf3-206ENST00000428313 SLC35G1Q2M3R5 365 aa17■□□□□ 0.31
C9orf3-206ENST00000428313 PNMA1Q8ND90 353 aa17■□□□□ 0.31
C9orf3-206ENST00000428313 KCNN1Q92952 543 aa17■□□□□ 0.31
C9orf3-206ENST00000428313 SLC35C1Q96A29 364 aa17■□□□□ 0.31
C9orf3-206ENST00000428313 FAM81BQ96LP2 452 aa17■□□□□ 0.31
C9orf3-206ENST00000428313 NUDT12Q9BQG2 462 aa17■□□□□ 0.31
C9orf3-206ENST00000428313 ZNHIT2Q9UHR6 403 aa17■□□□□ 0.31
C9orf3-206ENST00000428313 SUGT1Q9Y2Z0 365 aa17■□□□□ 0.31
C9orf3-206ENST00000428313 SEC23IPQ9Y6Y8 1000 aaKnown RBP17■□□□□ 0.31
C9orf3-206ENST00000428313 C15orf38-AP3S2A0A0A6YYH1 394 aa16.99■□□□□ 0.31
C9orf3-206ENST00000428313 POTEMA6NI47 508 aa16.99■□□□□ 0.31
C9orf3-206ENST00000428313 TFAP2AP05549 437 aa16.99■□□□□ 0.31
C9orf3-206ENST00000428313 SGO2Q562F6 1265 aa16.99■□□□□ 0.31
C9orf3-206ENST00000428313 SFT2D3Q587I9 215 aa16.99■□□□□ 0.31
C9orf3-206ENST00000428313 HERC4Q5GLZ8 1057 aaPredicted RBP16.99■□□□□ 0.31
C9orf3-206ENST00000428313 DCAF17Q5H9S7 520 aaPredicted RBP16.99■□□□□ 0.31
C9orf3-206ENST00000428313 ARPINQ7Z6K5 226 aa16.99■□□□□ 0.31
C9orf3-206ENST00000428313 SFR1Q86XK3 245 aa16.99■□□□□ 0.31
C9orf3-206ENST00000428313 ULK2Q8IYT8 1036 aa16.99■□□□□ 0.31
C9orf3-206ENST00000428313 HELBQ8NG08 1087 aaPredicted RBP16.99■□□□□ 0.31
C9orf3-206ENST00000428313 MRPS26Q9BYN8 205 aaKnown RBP16.99■□□□□ 0.31
C9orf3-206ENST00000428313 S100A14Q9HCY8 104 aa16.99■□□□□ 0.31
C9orf3-206ENST00000428313 TRPV5Q9NQA5 729 aa16.99■□□□□ 0.31
C9orf3-206ENST00000428313 ASAP1Q9ULH1 1129 aa16.99■□□□□ 0.31
C9orf3-206ENST00000428313 ZNF711Q9Y462 761 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms