RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 CACNB1Q02641 598 aaPredicted RBP13.18□□□□□ -0.3
DDX39B-208ENST00000428098 ELF2Q15723 593 aa13.18□□□□□ -0.3
DDX39B-208ENST00000428098 Q4G0T1 1027 aa13.18□□□□□ -0.3
DDX39B-208ENST00000428098 STXBP5Q5T5C0 1151 aa13.18□□□□□ -0.3
DDX39B-208ENST00000428098 CAMKK1Q8N5S9 505 aa13.18□□□□□ -0.3
DDX39B-208ENST00000428098 C3orf58Q8NDZ4 430 aa13.18□□□□□ -0.3
DDX39B-208ENST00000428098 ETNPPLQ8TBG4 499 aa13.18□□□□□ -0.3
DDX39B-208ENST00000428098 FAM200AQ8TCP9 573 aa13.18□□□□□ -0.3
DDX39B-208ENST00000428098 TCP11Q8WWU5 503 aa13.18□□□□□ -0.3
DDX39B-208ENST00000428098 RUFY2Q8WXA3 655 aa13.18□□□□□ -0.3
DDX39B-208ENST00000428098 E2F7Q96AV8 911 aa13.18□□□□□ -0.3
DDX39B-208ENST00000428098 LRIG1Q96JA1 1093 aa13.18□□□□□ -0.3
DDX39B-208ENST00000428098 ZNF512Q96ME7 567 aaPredicted RBP13.18□□□□□ -0.3
DDX39B-208ENST00000428098 TMEM209Q96SK2 561 aa13.18□□□□□ -0.3
DDX39B-208ENST00000428098 LRRC3Q9BY71 257 aa13.18□□□□□ -0.3
DDX39B-208ENST00000428098 FBRSL1Q9HCM7 1045 aaKnown RBP13.18□□□□□ -0.3
DDX39B-208ENST00000428098 HECTD1Q9ULT8 2610 aa13.17□□□□□ -0.3
DDX39B-208ENST00000428098 URB1O60287 2271 aaKnown RBP13.17□□□□□ -0.3
DDX39B-208ENST00000428098 CYP3A7-CYP3A51PA0A087WV96 503 aa13.17□□□□□ -0.3
DDX39B-208ENST00000428098 ZBTB43O43298 467 aa13.17□□□□□ -0.3
DDX39B-208ENST00000428098 CYP3A7P24462 503 aa13.17□□□□□ -0.3
DDX39B-208ENST00000428098 CLCNKBP51801 687 aa13.17□□□□□ -0.3
DDX39B-208ENST00000428098 POU5F1BQ06416 359 aa13.17□□□□□ -0.3
DDX39B-208ENST00000428098 TWF1Q12792 350 aa13.17□□□□□ -0.3
DDX39B-208ENST00000428098 CAPSQ13938 189 aa13.17□□□□□ -0.3
DDX39B-208ENST00000428098 EXOC8Q8IYI6 725 aa13.17□□□□□ -0.3
DDX39B-208ENST00000428098 TCEANC2Q96MN5 208 aa13.17□□□□□ -0.3
DDX39B-208ENST00000428098 MKNK1Q9BUB5 465 aa13.17□□□□□ -0.3
DDX39B-208ENST00000428098 MYO18BQ8IUG5 2567 aa13.17□□□□□ -0.3
DDX39B-208ENST00000428098 ZNF462Q96JM2 2506 aa13.16□□□□□ -0.3
DDX39B-208ENST00000428098 EIF4E1BA6NMX2 242 aaKnown RBP13.16□□□□□ -0.3
DDX39B-208ENST00000428098 TMEM189-UBE2V1I3L0A0 370 aa13.16□□□□□ -0.3
DDX39B-208ENST00000428098 SLC27A2O14975 620 aa13.16□□□□□ -0.3
DDX39B-208ENST00000428098 TBX3O15119 743 aa13.16□□□□□ -0.3
DDX39B-208ENST00000428098 ATG13O75143 517 aa13.16□□□□□ -0.3
DDX39B-208ENST00000428098 C1QL1O75973 258 aa13.16□□□□□ -0.3
DDX39B-208ENST00000428098 PRKCBP05771 671 aa13.16□□□□□ -0.3
DDX39B-208ENST00000428098 GNA11P29992 359 aa13.16□□□□□ -0.3
DDX39B-208ENST00000428098 ARL2P36404 184 aa13.16□□□□□ -0.3
DDX39B-208ENST00000428098 MRPL58Q14197 206 aaKnown RBP13.16□□□□□ -0.3
DDX39B-208ENST00000428098 MXD4Q14582 209 aaPredicted RBP13.16□□□□□ -0.3
DDX39B-208ENST00000428098 UPP1Q16831 310 aa13.16□□□□□ -0.3
DDX39B-208ENST00000428098 XKR9Q5GH70 373 aa13.16□□□□□ -0.3
DDX39B-208ENST00000428098 TMEM196Q5HYL7 178 aa13.16□□□□□ -0.3
DDX39B-208ENST00000428098 IQCEQ6IPM2 695 aa13.16□□□□□ -0.3
DDX39B-208ENST00000428098 RAB44Q7Z6P3 723 aaPredicted RBP13.16□□□□□ -0.3
DDX39B-208ENST00000428098 TBCKQ8TEA7 893 aa13.16□□□□□ -0.3
DDX39B-208ENST00000428098 GPR88Q9GZN0 384 aa13.16□□□□□ -0.3
DDX39B-208ENST00000428098 SLITRK6Q9H5Y7 841 aa13.16□□□□□ -0.3
DDX39B-208ENST00000428098 RGL1Q9NZL6 768 aa13.16□□□□□ -0.3
DDX39B-208ENST00000428098 USP20Q9Y2K6 914 aa13.16□□□□□ -0.3
DDX39B-208ENST00000428098 KIF26AQ9ULI4 1882 aaPredicted RBP13.16□□□□□ -0.3
DDX39B-208ENST00000428098 CCDC194A0A1B0GVG4 234 aa13.15□□□□□ -0.3
DDX39B-208ENST00000428098 A0A1W2PRU2 124 aa13.15□□□□□ -0.3
DDX39B-208ENST00000428098 OTOL1A6NHN0 477 aaPredicted RBP13.15□□□□□ -0.3
DDX39B-208ENST00000428098 RNF40O75150 1001 aa13.15□□□□□ -0.3
DDX39B-208ENST00000428098 RECQL4O94761 1208 aa13.15□□□□□ -0.3
DDX39B-208ENST00000428098 EGFP01133 1207 aa13.15□□□□□ -0.3
DDX39B-208ENST00000428098 BCKDHBP21953 392 aa13.15□□□□□ -0.3
DDX39B-208ENST00000428098 GLRA2P23416 452 aa13.15□□□□□ -0.3
DDX39B-208ENST00000428098 YWHABP31946 246 aaKnown RBP13.15□□□□□ -0.3
DDX39B-208ENST00000428098 GBP1P32455 592 aa13.15□□□□□ -0.3
DDX39B-208ENST00000428098 EXOSC10Q01780 885 aaKnown RBP13.15□□□□□ -0.3
DDX39B-208ENST00000428098 SEMA3BQ13214 749 aa13.15□□□□□ -0.3
DDX39B-208ENST00000428098 ARHGAP29Q52LW3 1261 aa13.15□□□□□ -0.3
DDX39B-208ENST00000428098 PMS2CLQ68D20 193 aa13.15□□□□□ -0.3
DDX39B-208ENST00000428098 CRELD1Q96HD1 420 aa13.15□□□□□ -0.3
DDX39B-208ENST00000428098 MTRQ99707 1265 aa13.15□□□□□ -0.3
DDX39B-208ENST00000428098 SLC32A1Q9H598 525 aa13.15□□□□□ -0.3
DDX39B-208ENST00000428098 GOLGA2P5Q9HBQ8 144 aa13.15□□□□□ -0.3
DDX39B-208ENST00000428098 ASAH2Q9NR71 780 aa13.15□□□□□ -0.3
DDX39B-208ENST00000428098 FBXL5Q9UKA1 691 aa13.15□□□□□ -0.3
DDX39B-208ENST00000428098 VAV3Q9UKW4 847 aa13.15□□□□□ -0.3
DDX39B-208ENST00000428098 RAXQ9Y2V3 346 aa13.15□□□□□ -0.3
DDX39B-208ENST00000428098 PPME1Q9Y570 386 aa13.15□□□□□ -0.3
DDX39B-208ENST00000428098 THADAQ6YHU6 1953 aa13.14□□□□□ -0.31
DDX39B-208ENST00000428098 GOLGA8AA7E2F4 631 aa13.14□□□□□ -0.31
DDX39B-208ENST00000428098 GOLGA8BA8MQT2 603 aa13.14□□□□□ -0.31
DDX39B-208ENST00000428098 P4HBP07237 508 aaKnown RBP13.14□□□□□ -0.31
DDX39B-208ENST00000428098 MAPK8P45983 427 aa13.14□□□□□ -0.31
DDX39B-208ENST00000428098 C19orf57Q0VDD7 668 aa13.14□□□□□ -0.31
DDX39B-208ENST00000428098 TFDP1Q14186 410 aa13.14□□□□□ -0.31
DDX39B-208ENST00000428098 ITPRIPL2Q3MIP1 535 aa13.14□□□□□ -0.31
DDX39B-208ENST00000428098 TTC22Q5TAA0 569 aa13.14□□□□□ -0.31
DDX39B-208ENST00000428098 NAIF1Q69YI7 327 aaPredicted RBP13.14□□□□□ -0.31
DDX39B-208ENST00000428098 TMC8Q8IU68 726 aa13.14□□□□□ -0.31
DDX39B-208ENST00000428098 NOSTRINQ8IVI9 506 aa13.14□□□□□ -0.31
DDX39B-208ENST00000428098 C4orf19Q8IY42 314 aa13.14□□□□□ -0.31
DDX39B-208ENST00000428098 MDM1Q8TC05 714 aa13.14□□□□□ -0.31
DDX39B-208ENST00000428098 PIGKQ92643 395 aa13.14□□□□□ -0.31
DDX39B-208ENST00000428098 PPP1R10Q96QC0 940 aaKnown RBP13.14□□□□□ -0.31
DDX39B-208ENST00000428098 NFKBIZQ9BYH8 718 aa13.14□□□□□ -0.31
DDX39B-208ENST00000428098 EBF1Q9UH73 591 aa13.14□□□□□ -0.31
DDX39B-208ENST00000428098 MBD1Q9UIS9 605 aaPredicted RBP13.14□□□□□ -0.31
DDX39B-208ENST00000428098 PLXNB3Q9ULL4 1909 aa13.13□□□□□ -0.31
DDX39B-208ENST00000428098 TRDMT1O14717 391 aaKnown RBP13.13□□□□□ -0.31
DDX39B-208ENST00000428098 PRPF3O43395 683 aaKnown RBP13.13□□□□□ -0.31
DDX39B-208ENST00000428098 VNN2O95498 520 aa13.13□□□□□ -0.31
DDX39B-208ENST00000428098 GALK1P51570 392 aa13.13□□□□□ -0.31
DDX39B-208ENST00000428098 SOX4Q06945 474 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms