RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 NT5DC4Q86YG4 428 aa19.53■□□□□ 0.72
HERC3-205ENST00000426683 CBWD2Q8IUF1 395 aa19.53■□□□□ 0.72
HERC3-205ENST00000426683 SUSD3Q96L08 255 aa19.53■□□□□ 0.72
HERC3-205ENST00000426683 FBXL18Q96ME1 805 aa19.53■□□□□ 0.72
HERC3-205ENST00000426683 NECAB3Q96P71 396 aaPredicted RBP19.53■□□□□ 0.72
HERC3-205ENST00000426683 KIAA1586Q9HCI6 787 aa19.53■□□□□ 0.72
HERC3-205ENST00000426683 DZANK1Q9NVP4 752 aa19.53■□□□□ 0.72
HERC3-205ENST00000426683 DPP3Q9NY33 737 aa19.53■□□□□ 0.72
HERC3-205ENST00000426683 CGNQ9P2M7 1197 aaKnown RBP19.53■□□□□ 0.72
HERC3-205ENST00000426683 PDCD11Q14690 1871 aaKnown RBP19.52■□□□□ 0.72
HERC3-205ENST00000426683 BRWD1Q9NSI6 2320 aa19.52■□□□□ 0.72
HERC3-205ENST00000426683 PPEF2O14830 753 aa19.52■□□□□ 0.72
HERC3-205ENST00000426683 SYN3O14994 580 aa19.52■□□□□ 0.72
HERC3-205ENST00000426683 GLUD1P00367 558 aa19.52■□□□□ 0.72
HERC3-205ENST00000426683 TFAMQ00059 246 aaKnown RBP19.52■□□□□ 0.72
HERC3-205ENST00000426683 C9orf57Q5W0N0 161 aa19.52■□□□□ 0.72
HERC3-205ENST00000426683 C12orf56Q8IXR9 622 aa19.52■□□□□ 0.72
HERC3-205ENST00000426683 C12orf76Q8N812 135 aaPredicted RBP19.52■□□□□ 0.72
HERC3-205ENST00000426683 XXYLT1Q8NBI6 393 aa19.52■□□□□ 0.72
HERC3-205ENST00000426683 RDH13Q8NBN7 331 aa19.52■□□□□ 0.72
HERC3-205ENST00000426683 GOLGA5Q8TBA6 731 aa19.52■□□□□ 0.72
HERC3-205ENST00000426683 UHRF1Q96T88 793 aaPredicted RBP19.52■□□□□ 0.72
HERC3-205ENST00000426683 CLSTN3Q9BQT9 956 aa19.52■□□□□ 0.72
HERC3-205ENST00000426683 S1PR5Q9H228 398 aa19.52■□□□□ 0.72
HERC3-205ENST00000426683 PDE11AQ9HCR9 933 aa19.52■□□□□ 0.72
HERC3-205ENST00000426683 USP15Q9Y4E8 981 aaPredicted RBP19.52■□□□□ 0.72
HERC3-205ENST00000426683 SPDYE4A6NLX3 237 aa19.51■□□□□ 0.71
HERC3-205ENST00000426683 PIRO00625 290 aa19.51■□□□□ 0.71
HERC3-205ENST00000426683 TGM5O43548 720 aa19.51■□□□□ 0.71
HERC3-205ENST00000426683 KINO60870 393 aaKnown RBP19.51■□□□□ 0.71
HERC3-205ENST00000426683 KIF20AO95235 890 aa19.51■□□□□ 0.71
HERC3-205ENST00000426683 AARSP49588 968 aaKnown RBP eCLIP19.51■□□□□ 0.71
HERC3-205ENST00000426683 SMAD2Q15796 467 aaKnown RBP19.51■□□□□ 0.71
HERC3-205ENST00000426683 VARS2Q5ST30 1063 aaKnown RBP19.51■□□□□ 0.71
HERC3-205ENST00000426683 ANKS3Q6ZW76 656 aa19.51■□□□□ 0.71
HERC3-205ENST00000426683 CACTINQ8WUQ7 758 aaKnown RBP19.51■□□□□ 0.71
HERC3-205ENST00000426683 KCTD10Q9H3F6 313 aa19.51■□□□□ 0.71
HERC3-205ENST00000426683 MAN1C1Q9NR34 630 aa19.51■□□□□ 0.71
HERC3-205ENST00000426683 MTRRQ9UBK8 725 aa19.51■□□□□ 0.71
HERC3-205ENST00000426683 HOOK1Q9UJC3 728 aaKnown RBP19.51■□□□□ 0.71
HERC3-205ENST00000426683 PCDHB8Q9UN66 801 aa19.51■□□□□ 0.71
HERC3-205ENST00000426683 ANO9A1A5B4 782 aa19.5■□□□□ 0.71
HERC3-205ENST00000426683 DLL1O00548 723 aa19.5■□□□□ 0.71
HERC3-205ENST00000426683 ADAM12O43184 909 aa19.5■□□□□ 0.71
HERC3-205ENST00000426683 SPATA31D3P0C874 917 aa19.5■□□□□ 0.71
HERC3-205ENST00000426683 SURF1Q15526 300 aa19.5■□□□□ 0.71
HERC3-205ENST00000426683 SNRNP35Q16560 246 aaKnown RBP19.5■□□□□ 0.71
HERC3-205ENST00000426683 RARS2Q5T160 578 aaKnown RBP19.5■□□□□ 0.71
HERC3-205ENST00000426683 DSTYKQ6XUX3 929 aa19.5■□□□□ 0.71
HERC3-205ENST00000426683 SPATA31D4Q6ZUB0 917 aa19.5■□□□□ 0.71
HERC3-205ENST00000426683 APPL2Q8NEU8 664 aa19.5■□□□□ 0.71
HERC3-205ENST00000426683 ERCC4Q92889 916 aaPredicted RBP19.5■□□□□ 0.71
HERC3-205ENST00000426683 ADAM7Q9H2U9 754 aa19.5■□□□□ 0.71
HERC3-205ENST00000426683 RMND1Q9NWS8 449 aa19.5■□□□□ 0.71
HERC3-205ENST00000426683 MAPK8IP1Q9UQF2 711 aa19.5■□□□□ 0.71
HERC3-205ENST00000426683 BACE2Q9Y5Z0 518 aa19.5■□□□□ 0.71
HERC3-205ENST00000426683 M0QZQ0 153 aa19.49■□□□□ 0.71
HERC3-205ENST00000426683 PDXKO00764 312 aa19.49■□□□□ 0.71
HERC3-205ENST00000426683 EXOC3O60645 756 aa19.49■□□□□ 0.71
HERC3-205ENST00000426683 SMC2O95347 1197 aa19.49■□□□□ 0.71
HERC3-205ENST00000426683 C1RP00736 705 aa19.49■□□□□ 0.71
HERC3-205ENST00000426683 OR1D2P34982 312 aa19.49■□□□□ 0.71
HERC3-205ENST00000426683 LILRA4P59901 499 aa19.49■□□□□ 0.71
HERC3-205ENST00000426683 UBE2HP62256 183 aa19.49■□□□□ 0.71
HERC3-205ENST00000426683 LMBRD2Q68DH5 695 aaPredicted RBP19.49■□□□□ 0.71
HERC3-205ENST00000426683 CES5AQ6NT32 575 aa19.49■□□□□ 0.71
HERC3-205ENST00000426683 LILRA6Q6PI73 481 aa19.49■□□□□ 0.71
HERC3-205ENST00000426683 ELMSAN1Q6PJG2 1045 aa19.49■□□□□ 0.71
HERC3-205ENST00000426683 RSPO2Q6UXX9 243 aaPredicted RBP19.49■□□□□ 0.71
HERC3-205ENST00000426683 SUSD6Q92537 303 aa19.49■□□□□ 0.71
HERC3-205ENST00000426683 SMARCE1Q969G3 411 aa19.49■□□□□ 0.71
HERC3-205ENST00000426683 FAM84AQ96KN4 292 aa19.49■□□□□ 0.71
HERC3-205ENST00000426683 IPO9Q96P70 1041 aaKnown RBP19.49■□□□□ 0.71
HERC3-205ENST00000426683 SFXN1Q9H9B4 322 aa19.49■□□□□ 0.71
HERC3-205ENST00000426683 DPP7Q9UHL4 492 aa19.49■□□□□ 0.71
HERC3-205ENST00000426683 PCDHA5Q9Y5H7 936 aa19.49■□□□□ 0.71
HERC3-205ENST00000426683 CDY1Q9Y6F8 540 aa19.49■□□□□ 0.71
HERC3-205ENST00000426683 H7C4K7 107 aa19.48■□□□□ 0.71
HERC3-205ENST00000426683 SPTLC1O15269 473 aa19.48■□□□□ 0.71
HERC3-205ENST00000426683 PRPF40AO75400 957 aaKnown RBP19.48■□□□□ 0.71
HERC3-205ENST00000426683 ITGB3P05106 788 aa19.48■□□□□ 0.71
HERC3-205ENST00000426683 TMEM191BP0C7N4 346 aa19.48■□□□□ 0.71
HERC3-205ENST00000426683 PAX3P23760 479 aa19.48■□□□□ 0.71
HERC3-205ENST00000426683 ITIH3Q06033 890 aa19.48■□□□□ 0.71
HERC3-205ENST00000426683 CYP24A1Q07973 514 aa19.48■□□□□ 0.71
HERC3-205ENST00000426683 MRPL58Q14197 206 aaKnown RBP19.48■□□□□ 0.71
HERC3-205ENST00000426683 TMC5Q6UXY8 1006 aa19.48■□□□□ 0.71
HERC3-205ENST00000426683 ELOA2Q8IYF1 753 aaPredicted RBP19.48■□□□□ 0.71
HERC3-205ENST00000426683 GUF1Q8N442 669 aaKnown RBP19.48■□□□□ 0.71
HERC3-205ENST00000426683 C1orf127Q8N9H9 656 aa19.48■□□□□ 0.71
HERC3-205ENST00000426683 KREMEN2Q8NCW0 462 aa19.48■□□□□ 0.71
HERC3-205ENST00000426683 GSDMAQ96QA5 445 aa19.48■□□□□ 0.71
HERC3-205ENST00000426683 MTMR12Q9C0I1 747 aa19.48■□□□□ 0.71
HERC3-205ENST00000426683 PLEKHA4Q9H4M7 779 aa19.48■□□□□ 0.71
HERC3-205ENST00000426683 TSHZ2Q9NRE2 1034 aa19.48■□□□□ 0.71
HERC3-205ENST00000426683 INTS13Q9NVM9 706 aa19.48■□□□□ 0.71
HERC3-205ENST00000426683 CDH22Q9UJ99 828 aa19.48■□□□□ 0.71
HERC3-205ENST00000426683 TIMM13Q9Y5L4 95 aaPredicted RBP19.48■□□□□ 0.71
HERC3-205ENST00000426683 VWA8A3KMH1 1905 aa19.47■□□□□ 0.71
HERC3-205ENST00000426683 CALUO43852 315 aaPredicted RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms