RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 CDH22Q9UJ99 828 aa24.22■■□□□ 1.47
PTCHD3P2-201ENST00000424937 SSTR3P32745 418 aaPredicted RBP24.21■■□□□ 1.47
PTCHD3P2-201ENST00000424937 ZP2Q05996 745 aa24.21■■□□□ 1.47
PTCHD3P2-201ENST00000424937 CES5AQ6NT32 575 aa24.21■■□□□ 1.47
PTCHD3P2-201ENST00000424937 KANK3Q6NY19 840 aa24.21■■□□□ 1.47
PTCHD3P2-201ENST00000424937 ADHFE1Q8IWW8 467 aa24.21■■□□□ 1.47
PTCHD3P2-201ENST00000424937 EFCAB13Q8IY85 973 aa24.21■■□□□ 1.47
PTCHD3P2-201ENST00000424937 GPD1LQ8N335 351 aa24.21■■□□□ 1.47
PTCHD3P2-201ENST00000424937 SUSD6Q92537 303 aa24.21■■□□□ 1.47
PTCHD3P2-201ENST00000424937 CLSTN3Q9BQT9 956 aa24.21■■□□□ 1.47
PTCHD3P2-201ENST00000424937 C2CD2Q9Y426 696 aa24.21■■□□□ 1.47
PTCHD3P2-201ENST00000424937 PPEF2O14830 753 aa24.2■■□□□ 1.46
PTCHD3P2-201ENST00000424937 KIAA0391O15091 583 aaKnown RBP24.2■■□□□ 1.46
PTCHD3P2-201ENST00000424937 RPN1P04843 607 aaKnown RBP24.2■■□□□ 1.46
PTCHD3P2-201ENST00000424937 SPATA31D3P0C874 917 aa24.2■■□□□ 1.46
PTCHD3P2-201ENST00000424937 WNT7BP56706 349 aa24.2■■□□□ 1.46
PTCHD3P2-201ENST00000424937 ITIH3Q06033 890 aa24.2■■□□□ 1.46
PTCHD3P2-201ENST00000424937 CBX2Q14781 532 aaPredicted RBP24.2■■□□□ 1.46
PTCHD3P2-201ENST00000424937 BMT2Q1RMZ1 405 aa24.2■■□□□ 1.46
PTCHD3P2-201ENST00000424937 ELMSAN1Q6PJG2 1045 aa24.2■■□□□ 1.46
PTCHD3P2-201ENST00000424937 SPATA31D4Q6ZUB0 917 aa24.2■■□□□ 1.46
PTCHD3P2-201ENST00000424937 ANKS3Q6ZW76 656 aa24.2■■□□□ 1.46
PTCHD3P2-201ENST00000424937 KIAA0895Q8NCT3 520 aa24.2■■□□□ 1.46
PTCHD3P2-201ENST00000424937 SUSD3Q96L08 255 aa24.2■■□□□ 1.46
PTCHD3P2-201ENST00000424937 POP1Q99575 1024 aaKnown RBP24.2■■□□□ 1.46
PTCHD3P2-201ENST00000424937 ADAM7Q9H2U9 754 aa24.2■■□□□ 1.46
PTCHD3P2-201ENST00000424937 AGPAT3Q9NRZ7 376 aa24.2■■□□□ 1.46
PTCHD3P2-201ENST00000424937 HSPBP1Q9NZL4 362 aa24.2■■□□□ 1.46
PTCHD3P2-201ENST00000424937 MTRRQ9UBK8 725 aa24.2■■□□□ 1.46
PTCHD3P2-201ENST00000424937 SYN3O14994 580 aa24.19■■□□□ 1.46
PTCHD3P2-201ENST00000424937 TGFB1I1O43294 461 aa24.19■■□□□ 1.46
PTCHD3P2-201ENST00000424937 TGM5O43548 720 aa24.19■■□□□ 1.46
PTCHD3P2-201ENST00000424937 WEE2P0C1S8 567 aa24.19■■□□□ 1.46
PTCHD3P2-201ENST00000424937 DPYDQ12882 1025 aa24.19■■□□□ 1.46
PTCHD3P2-201ENST00000424937 STK4Q13043 487 aa24.19■■□□□ 1.46
PTCHD3P2-201ENST00000424937 VARS2Q5ST30 1063 aaKnown RBP24.19■■□□□ 1.46
PTCHD3P2-201ENST00000424937 TMC5Q6UXY8 1006 aa24.19■■□□□ 1.46
PTCHD3P2-201ENST00000424937 HS2ST1Q7LGA3 356 aa24.19■■□□□ 1.46
PTCHD3P2-201ENST00000424937 GJD3Q8N144 294 aa24.19■■□□□ 1.46
PTCHD3P2-201ENST00000424937 CCDC47Q96A33 483 aaKnown RBP24.19■■□□□ 1.46
PTCHD3P2-201ENST00000424937 CCDC34Q96HJ3 373 aa24.19■■□□□ 1.46
PTCHD3P2-201ENST00000424937 DPP7Q9UHL4 492 aa24.19■■□□□ 1.46
PTCHD3P2-201ENST00000424937 ADAM12O43184 909 aa24.18■■□□□ 1.46
PTCHD3P2-201ENST00000424937 PSMD2Q13200 908 aa24.18■■□□□ 1.46
PTCHD3P2-201ENST00000424937 C9orf57Q5W0N0 161 aa24.18■■□□□ 1.46
PTCHD3P2-201ENST00000424937 FMR1NBQ8N0W7 255 aaPredicted RBP24.18■■□□□ 1.46
PTCHD3P2-201ENST00000424937 FEZF2Q8TBJ5 459 aa24.18■■□□□ 1.46
PTCHD3P2-201ENST00000424937 CD320Q9NPF0 282 aa24.18■■□□□ 1.46
PTCHD3P2-201ENST00000424937 DPP3Q9NY33 737 aa24.18■■□□□ 1.46
PTCHD3P2-201ENST00000424937 CHMP5Q9NZZ3 219 aa24.18■■□□□ 1.46
PTCHD3P2-201ENST00000424937 CDY1Q9Y6F8 540 aa24.18■■□□□ 1.46
PTCHD3P2-201ENST00000424937 BDP1A6H8Y1 2624 aa24.17■■□□□ 1.46
PTCHD3P2-201ENST00000424937 CLIC2O15247 247 aa24.17■■□□□ 1.46
PTCHD3P2-201ENST00000424937 OR1D2P34982 312 aa24.17■■□□□ 1.46
PTCHD3P2-201ENST00000424937 CYP2J2P51589 502 aa24.17■■□□□ 1.46
PTCHD3P2-201ENST00000424937 TFAMQ00059 246 aaKnown RBP24.17■■□□□ 1.46
PTCHD3P2-201ENST00000424937 KNOP1Q1ED39 458 aaKnown RBP24.17■■□□□ 1.46
PTCHD3P2-201ENST00000424937 NT5DC4Q86YG4 428 aa24.17■■□□□ 1.46
PTCHD3P2-201ENST00000424937 CBWD2Q8IUF1 395 aa24.17■■□□□ 1.46
PTCHD3P2-201ENST00000424937 RIPOR3Q96MK2 946 aa24.17■■□□□ 1.46
PTCHD3P2-201ENST00000424937 PHF7Q9BWX1 381 aaPredicted RBP24.17■■□□□ 1.46
PTCHD3P2-201ENST00000424937 PCDHB8Q9UN66 801 aa24.17■■□□□ 1.46
PTCHD3P2-201ENST00000424937 BACE2Q9Y5Z0 518 aa24.17■■□□□ 1.46
PTCHD3P2-201ENST00000424937 MTHFRP42898 656 aa24.16■■□□□ 1.46
PTCHD3P2-201ENST00000424937 SNRPFP62306 86 aaKnown RBP24.16■■□□□ 1.46
PTCHD3P2-201ENST00000424937 FAM160A1Q05DH4 1040 aa24.16■■□□□ 1.46
PTCHD3P2-201ENST00000424937 LILRA6Q6PI73 481 aa24.16■■□□□ 1.46
PTCHD3P2-201ENST00000424937 RSPO2Q6UXX9 243 aaPredicted RBP24.16■■□□□ 1.46
PTCHD3P2-201ENST00000424937 DSTYKQ6XUX3 929 aa24.16■■□□□ 1.46
PTCHD3P2-201ENST00000424937 KREMEN2Q8NCW0 462 aa24.16■■□□□ 1.46
PTCHD3P2-201ENST00000424937 APPL2Q8NEU8 664 aa24.16■■□□□ 1.46
PTCHD3P2-201ENST00000424937 NECTIN4Q96NY8 510 aa24.16■■□□□ 1.46
PTCHD3P2-201ENST00000424937 PLEKHA4Q9H4M7 779 aa24.16■■□□□ 1.46
PTCHD3P2-201ENST00000424937 POMKQ9H5K3 350 aa24.16■■□□□ 1.46
PTCHD3P2-201ENST00000424937 PDE11AQ9HCR9 933 aa24.16■■□□□ 1.46
PTCHD3P2-201ENST00000424937 FBXW11Q9UKB1 542 aa24.16■■□□□ 1.46
PTCHD3P2-201ENST00000424937 DOCK6Q96HP0 2047 aa24.15■■□□□ 1.46
PTCHD3P2-201ENST00000424937 ANO9A1A5B4 782 aa24.15■■□□□ 1.46
PTCHD3P2-201ENST00000424937 ZNF233A6NK53 670 aa24.15■■□□□ 1.46
PTCHD3P2-201ENST00000424937 H7C4K7 107 aa24.15■■□□□ 1.46
PTCHD3P2-201ENST00000424937 M0QZQ0 153 aa24.15■■□□□ 1.46
PTCHD3P2-201ENST00000424937 RFPL2O75678 378 aa24.15■■□□□ 1.46
PTCHD3P2-201ENST00000424937 RHOBTB3O94955 611 aa24.15■■□□□ 1.46
PTCHD3P2-201ENST00000424937 C1RP00736 705 aa24.15■■□□□ 1.46
PTCHD3P2-201ENST00000424937 AARSP49588 968 aaKnown RBP eCLIP24.15■■□□□ 1.46
PTCHD3P2-201ENST00000424937 ZNF280DQ6N043 979 aa24.15■■□□□ 1.46
PTCHD3P2-201ENST00000424937 HDAC7Q8WUI4 952 aa24.15■■□□□ 1.46
PTCHD3P2-201ENST00000424937 RPGRIP1Q96KN7 1286 aa24.15■■□□□ 1.46
PTCHD3P2-201ENST00000424937 KIAA1586Q9HCI6 787 aa24.15■■□□□ 1.46
PTCHD3P2-201ENST00000424937 CGNQ9P2M7 1197 aaKnown RBP24.15■■□□□ 1.46
PTCHD3P2-201ENST00000424937 MUC3AQ02505 3323 aa24.14■■□□□ 1.46
PTCHD3P2-201ENST00000424937 CCDC195A0A1B0GUA6 201 aa24.14■■□□□ 1.45
PTCHD3P2-201ENST00000424937 C19orf67A6NJJ6 358 aa24.14■■□□□ 1.45
PTCHD3P2-201ENST00000424937 PIRO00625 290 aa24.14■■□□□ 1.45
PTCHD3P2-201ENST00000424937 SP100P23497 879 aaPredicted RBP24.14■■□□□ 1.45
PTCHD3P2-201ENST00000424937 LILRA4P59901 499 aa24.14■■□□□ 1.45
PTCHD3P2-201ENST00000424937 SNW1Q13573 536 aaKnown RBP24.14■■□□□ 1.45
PTCHD3P2-201ENST00000424937 RAB33AQ14088 237 aa24.14■■□□□ 1.45
PTCHD3P2-201ENST00000424937 SNRNP35Q16560 246 aaKnown RBP24.14■■□□□ 1.45
PTCHD3P2-201ENST00000424937 CTXN3Q4LDR2 81 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms