RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 NMT1P30419 496 aaKnown RBP11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 PGM1P36871 562 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 HIRAP54198 1017 aaPredicted RBP11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 USP17L24Q0WX57 530 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 AP1B1Q10567 949 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 ACAP1Q15027 740 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 SIX1Q15475 284 aaPredicted RBP11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 PHLDB3Q6NSJ2 640 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 USP17L6PQ6QN14 398 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 PPP1R21Q6ZMI0 780 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 ALYREFQ86V81 257 aaKnown RBP11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 ANKRD35Q8N283 1001 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 ZNF75CPQ92670 426 aaPredicted RBP11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 HAPLN3Q96S86 360 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 RAB34Q9BZG1 259 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 SHCBP1LQ9BZQ2 653 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 VPS37BQ9H9H4 285 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 PDP2Q9P2J9 529 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 MTUS1Q9ULD2 1270 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 SBF2Q86WG5 1849 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 CYP26A1O43174 497 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 CCDC22O60826 627 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 HAUS5O94927 633 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 OATP04181 439 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 KITP10721 976 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 ESRRAP11474 423 aaPredicted RBP11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 ETS1P14921 441 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 TAL1P17542 331 aaPredicted RBP11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 LMNB1P20700 586 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 RPL13P26373 211 aaKnown RBP11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 SSTR3P32745 418 aaPredicted RBP11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 MKRN3Q13064 507 aaKnown RBP11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 PARP10Q53GL7 1025 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 SYCP2LQ5T4T6 812 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 ANKMY2Q8IV38 441 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 DAGLBQ8NCG7 672 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 FAM84BQ96KN1 310 aaPredicted RBP11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 IWS1Q96ST2 819 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 THTPAQ9BU02 230 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 MAK16Q9BXY0 300 aaKnown RBP11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 GPR88Q9GZN0 384 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 SYNCQ9H7C4 482 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 SAYSD1Q9NPB0 183 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 PCDHGB4Q9UN71 923 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 PCDHGB5Q9Y5G0 923 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 ECE2O60344 883 aa11.96□□□□□ -0.5
SEC61A1-202ENST00000424880 SLURP2P0DP57 97 aa11.96□□□□□ -0.5
SEC61A1-202ENST00000424880 ATP6V1B1P15313 513 aa11.96□□□□□ -0.5
SEC61A1-202ENST00000424880 FXR2P51116 673 aaKnown RBP eCLIP11.96□□□□□ -0.5
SEC61A1-202ENST00000424880 ERFEQ4G0M1 354 aa11.96□□□□□ -0.5
SEC61A1-202ENST00000424880 TMEM119Q4V9L6 283 aa11.96□□□□□ -0.5
SEC61A1-202ENST00000424880 SEPT12Q8IYM1 358 aa11.96□□□□□ -0.5
SEC61A1-202ENST00000424880 RBM15Q96T37 977 aaKnown RBP eCLIP11.96□□□□□ -0.55e-6■■□□□ 14.2
SEC61A1-202ENST00000424880 MAF1Q9H063 256 aa11.96□□□□□ -0.5
SEC61A1-202ENST00000424880 UBE2TQ9NPD8 197 aaPredicted RBP11.96□□□□□ -0.5
SEC61A1-202ENST00000424880 ARHGEF38Q9NXL2 777 aa11.96□□□□□ -0.5
SEC61A1-202ENST00000424880 SLC17A7Q9P2U7 560 aa11.96□□□□□ -0.5
SEC61A1-202ENST00000424880 MARCOQ9UEW3 520 aaPredicted RBP11.96□□□□□ -0.5
SEC61A1-202ENST00000424880 SRP68Q9UHB9 627 aaKnown RBP11.96□□□□□ -0.5
SEC61A1-202ENST00000424880 ANKRD62A6NC57 917 aa11.95□□□□□ -0.5
SEC61A1-202ENST00000424880 MEI4A8MW99 385 aa11.95□□□□□ -0.5
SEC61A1-202ENST00000424880 B2RBV5 119 aa11.95□□□□□ -0.5
SEC61A1-202ENST00000424880 EYA4O95677 639 aa11.95□□□□□ -0.5
SEC61A1-202ENST00000424880 CCDC166P0CW27 439 aa11.95□□□□□ -0.5
SEC61A1-202ENST00000424880 DESP17661 470 aa11.95□□□□□ -0.5
SEC61A1-202ENST00000424880 NPEPPSP55786 919 aa11.95□□□□□ -0.5
SEC61A1-202ENST00000424880 MPP3Q13368 585 aa11.95□□□□□ -0.5
SEC61A1-202ENST00000424880 LSAMPQ13449 338 aa11.95□□□□□ -0.5
SEC61A1-202ENST00000424880 TBC1D9BQ66K14 1250 aa11.95□□□□□ -0.5
SEC61A1-202ENST00000424880 TXNRD3Q86VQ6 643 aa11.95□□□□□ -0.5
SEC61A1-202ENST00000424880 GRAMD1AQ96CP6 724 aa11.95□□□□□ -0.5
SEC61A1-202ENST00000424880 CLMNQ96JQ2 1002 aa11.95□□□□□ -0.5
SEC61A1-202ENST00000424880 FAM84AQ96KN4 292 aa11.95□□□□□ -0.5
SEC61A1-202ENST00000424880 LZTS2Q9BRK4 669 aa11.95□□□□□ -0.5
SEC61A1-202ENST00000424880 IQCGQ9H095 443 aaKnown RBP11.95□□□□□ -0.5
SEC61A1-202ENST00000424880 ZNF395Q9H8N7 513 aaPredicted RBP11.95□□□□□ -0.5
SEC61A1-202ENST00000424880 TISP43B9A030 160 aa11.95□□□□□ -0.5
SEC61A1-202ENST00000424880 PLS3P13797 630 aa11.95□□□□□ -0.5
SEC61A1-202ENST00000424880 ATF2P15336 505 aa11.95□□□□□ -0.5
SEC61A1-202ENST00000424880 VAV1P15498 845 aa11.95□□□□□ -0.5
SEC61A1-202ENST00000424880 GCAP28676 217 aa11.95□□□□□ -0.5
SEC61A1-202ENST00000424880 SH3BGRP55822 239 aaPredicted RBP11.95□□□□□ -0.5
SEC61A1-202ENST00000424880 NR1H3Q13133 447 aa11.95□□□□□ -0.5
SEC61A1-202ENST00000424880 ZNF568Q3ZCX4 644 aa11.95□□□□□ -0.5
SEC61A1-202ENST00000424880 CAVIN4Q5BKX8 364 aa11.95□□□□□ -0.5
SEC61A1-202ENST00000424880 GSTA5Q7RTV2 222 aa11.95□□□□□ -0.5
SEC61A1-202ENST00000424880 C7orf43Q8WVR3 580 aa11.95□□□□□ -0.5
SEC61A1-202ENST00000424880 CCDC124Q96CT7 223 aaKnown RBP11.95□□□□□ -0.5
SEC61A1-202ENST00000424880 PCDHB18PQ96TA0 734 aa11.95□□□□□ -0.5
SEC61A1-202ENST00000424880 SMYD3Q9H7B4 428 aa11.95□□□□□ -0.5
SEC61A1-202ENST00000424880 RMI1Q9H9A7 625 aa11.95□□□□□ -0.5
SEC61A1-202ENST00000424880 CASZ1Q86V15 1759 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 FAM237BA0A1B0GVD1 139 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 BOLA2-SMG1P6H3BVE0 249 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 ZNF862O60290 1169 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 LMNAP02545 664 aaKnown RBP11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 IVDP26440 423 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 MARSP56192 900 aaKnown RBP11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 DLG4P78352 724 aa11.94□□□□□ -0.5
SEC61A1-202ENST00000424880 DSG1Q02413 1049 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms