RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 INTS2Q9H0H0 1204 aaKnown RBP13.45□□□□□ -0.26
TMEM53-206ENST00000420706 SIX2Q9NPC8 291 aa13.45□□□□□ -0.26
TMEM53-206ENST00000420706 GCNT4Q9P109 453 aa13.45□□□□□ -0.26
TMEM53-206ENST00000420706 COL4A6Q14031 1691 aa13.44□□□□□ -0.26
TMEM53-206ENST00000420706 CASTOR2A6NHX0 329 aa13.44□□□□□ -0.26
TMEM53-206ENST00000420706 PODXLO00592 558 aa13.44□□□□□ -0.26
TMEM53-206ENST00000420706 ZC3H11AO75152 810 aaKnown RBP eCLIP13.44□□□□□ -0.26
TMEM53-206ENST00000420706 NOL4O94818 638 aa13.44□□□□□ -0.26
TMEM53-206ENST00000420706 STAU1O95793 577 aaKnown RBP13.44□□□□□ -0.26
TMEM53-206ENST00000420706 ASS1P00966 412 aaKnown RBP13.44□□□□□ -0.26
TMEM53-206ENST00000420706 ATP2A2P16615 1042 aaKnown RBP13.44□□□□□ -0.26
TMEM53-206ENST00000420706 IGFBP6P24592 240 aaPredicted RBP13.44□□□□□ -0.26
TMEM53-206ENST00000420706 APBA1Q02410 837 aa13.44□□□□□ -0.26
TMEM53-206ENST00000420706 LRMPQ12912 555 aa13.44□□□□□ -0.26
TMEM53-206ENST00000420706 UPP1Q16831 310 aa13.44□□□□□ -0.26
TMEM53-206ENST00000420706 WDR44Q5JSH3 913 aa13.44□□□□□ -0.26
TMEM53-206ENST00000420706 KLHDC7AQ5VTJ3 777 aa13.44□□□□□ -0.26
TMEM53-206ENST00000420706 PRPF38BQ5VTL8 546 aaKnown RBP13.44□□□□□ -0.26
TMEM53-206ENST00000420706 TRIM65Q6PJ69 517 aa13.44□□□□□ -0.26
TMEM53-206ENST00000420706 CD300LGQ6UXG3 332 aa13.44□□□□□ -0.26
TMEM53-206ENST00000420706 HERC6Q8IVU3 1022 aa13.44□□□□□ -0.26
TMEM53-206ENST00000420706 CMTR2Q8IYT2 770 aaKnown RBP13.44□□□□□ -0.26
TMEM53-206ENST00000420706 LRRC43Q8N309 656 aa13.44□□□□□ -0.26
TMEM53-206ENST00000420706 TAF4BQ92750 862 aa13.44□□□□□ -0.26
TMEM53-206ENST00000420706 ELMO3Q96BJ8 720 aa13.44□□□□□ -0.26
TMEM53-206ENST00000420706 PCMTD1Q96MG8 357 aaPredicted RBP13.44□□□□□ -0.26
TMEM53-206ENST00000420706 UROC1Q96N76 676 aa13.44□□□□□ -0.26
TMEM53-206ENST00000420706 PAAF1Q9BRP4 392 aa13.44□□□□□ -0.26
TMEM53-206ENST00000420706 UBE2OQ9C0C9 1292 aaKnown RBP13.44□□□□□ -0.26
TMEM53-206ENST00000420706 XYLT2Q9H1B5 865 aa13.44□□□□□ -0.26
TMEM53-206ENST00000420706 CWH43Q9H720 699 aa13.44□□□□□ -0.26
TMEM53-206ENST00000420706 VRTNQ9H8Y1 702 aa13.44□□□□□ -0.26
TMEM53-206ENST00000420706 APOBEC3GQ9HC16 384 aaKnown RBP13.44□□□□□ -0.26
TMEM53-206ENST00000420706 PLCB1Q9NQ66 1216 aa13.44□□□□□ -0.26
TMEM53-206ENST00000420706 HCSTQ9UBK5 93 aa13.44□□□□□ -0.26
TMEM53-206ENST00000420706 CACNG4Q9UBN1 327 aa13.44□□□□□ -0.26
TMEM53-206ENST00000420706 DNAJB4Q9UDY4 337 aa13.44□□□□□ -0.26
TMEM53-206ENST00000420706 R3HCC1Q9Y3T6 440 aaKnown RBP13.44□□□□□ -0.26
TMEM53-206ENST00000420706 ITIH6Q6UXX5 1313 aa13.43□□□□□ -0.26
TMEM53-206ENST00000420706 ALDH2P05091 517 aa13.43□□□□□ -0.26
TMEM53-206ENST00000420706 CDC25BP30305 580 aa13.43□□□□□ -0.26
TMEM53-206ENST00000420706 BTG3Q14201 252 aaPredicted RBP13.43□□□□□ -0.26
TMEM53-206ENST00000420706 SPOPLQ6IQ16 392 aa13.43□□□□□ -0.26
TMEM53-206ENST00000420706 PHLDB3Q6NSJ2 640 aa13.43□□□□□ -0.26
TMEM53-206ENST00000420706 DCLRE1AQ6PJP8 1040 aa13.43□□□□□ -0.26
TMEM53-206ENST00000420706 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.43□□□□□ -0.26
TMEM53-206ENST00000420706 ARHGEF19Q8IW93 802 aa13.43□□□□□ -0.26
TMEM53-206ENST00000420706 LRRC52Q8N7C0 313 aa13.43□□□□□ -0.26
TMEM53-206ENST00000420706 CCDC150Q8NCX0 1101 aa13.43□□□□□ -0.26
TMEM53-206ENST00000420706 NEK11Q8NG66 645 aa13.43□□□□□ -0.26
TMEM53-206ENST00000420706 RABGGTAQ92696 567 aa13.43□□□□□ -0.26
TMEM53-206ENST00000420706 HPDLQ96IR7 371 aa13.43□□□□□ -0.26
TMEM53-206ENST00000420706 RNPC3Q96LT9 517 aaKnown RBP13.43□□□□□ -0.26
TMEM53-206ENST00000420706 NT5C1BQ96P26 610 aa13.43□□□□□ -0.26
TMEM53-206ENST00000420706 YME1L1Q96TA2 773 aa13.43□□□□□ -0.26
TMEM53-206ENST00000420706 RAD9AQ99638 391 aa13.43□□□□□ -0.26
TMEM53-206ENST00000420706 TMEM175Q9BSA9 504 aa13.43□□□□□ -0.26
TMEM53-206ENST00000420706 ZBED2Q9BTP6 218 aa13.43□□□□□ -0.26
TMEM53-206ENST00000420706 NUP58Q9BVL2 599 aa13.43□□□□□ -0.26
TMEM53-206ENST00000420706 GANQ9H2C0 597 aa13.43□□□□□ -0.26
TMEM53-206ENST00000420706 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.43□□□□□ -0.26
TMEM53-206ENST00000420706 INSL6Q9Y581 213 aa13.43□□□□□ -0.26
TMEM53-206ENST00000420706 NUB1Q9Y5A7 615 aa13.43□□□□□ -0.26
TMEM53-206ENST00000420706 SCN1AP35498 2009 aa13.42□□□□□ -0.26
TMEM53-206ENST00000420706 NRP1O14786 923 aa13.42□□□□□ -0.26
TMEM53-206ENST00000420706 EPHB6O15197 1021 aa13.42□□□□□ -0.26
TMEM53-206ENST00000420706 SPTLC1O15269 473 aa13.42□□□□□ -0.26
TMEM53-206ENST00000420706 GALTP07902 379 aa13.42□□□□□ -0.26
TMEM53-206ENST00000420706 BMP8BP34820 402 aa13.42□□□□□ -0.26
TMEM53-206ENST00000420706 PNPLA4P41247 253 aa13.42□□□□□ -0.26
TMEM53-206ENST00000420706 OR1G1P47890 313 aa13.42□□□□□ -0.26
TMEM53-206ENST00000420706 TAF6P49848 677 aa13.42□□□□□ -0.26
TMEM53-206ENST00000420706 LILRA4P59901 499 aa13.42□□□□□ -0.26
TMEM53-206ENST00000420706 NOP14P78316 857 aaKnown RBP13.42□□□□□ -0.26
TMEM53-206ENST00000420706 MYO1EQ12965 1108 aa13.42□□□□□ -0.26
TMEM53-206ENST00000420706 ZNF699Q32M78 642 aa13.42□□□□□ -0.26
TMEM53-206ENST00000420706 WDR72Q3MJ13 1102 aa13.42□□□□□ -0.26
TMEM53-206ENST00000420706 ZNF667Q5HYK9 610 aa13.42□□□□□ -0.26
TMEM53-206ENST00000420706 SPECC1LQ69YQ0 1117 aa13.42□□□□□ -0.26
TMEM53-206ENST00000420706 GJB7Q6PEY0 223 aa13.42□□□□□ -0.26
TMEM53-206ENST00000420706 TMC6Q7Z403 805 aa13.42□□□□□ -0.26
TMEM53-206ENST00000420706 ZNF560Q96MR9 790 aa13.42□□□□□ -0.26
TMEM53-206ENST00000420706 IMPG2Q9BZV3 1241 aa13.42□□□□□ -0.26
TMEM53-206ENST00000420706 FAM207AQ9NSI2 230 aaPredicted RBP13.42□□□□□ -0.26
TMEM53-206ENST00000420706 APEX2Q9UBZ4 518 aa13.42□□□□□ -0.26
TMEM53-206ENST00000420706 FAN1Q9Y2M0 1017 aa13.42□□□□□ -0.26
TMEM53-206ENST00000420706 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.42□□□□□ -0.26
TMEM53-206ENST00000420706 KPNA7A9QM74 516 aa13.41□□□□□ -0.26
TMEM53-206ENST00000420706 TMEM189-UBE2V1I3L0A0 370 aa13.41□□□□□ -0.26
TMEM53-206ENST00000420706 B3GAT3O94766 335 aa13.41□□□□□ -0.26
TMEM53-206ENST00000420706 UCHL3P15374 230 aa13.41□□□□□ -0.26
TMEM53-206ENST00000420706 SLC11A1P49279 550 aa13.41□□□□□ -0.26
TMEM53-206ENST00000420706 BCAR1P56945 870 aa13.41□□□□□ -0.26
TMEM53-206ENST00000420706 TBX2Q13207 712 aaPredicted RBP13.41□□□□□ -0.26
TMEM53-206ENST00000420706 SV2CQ496J9 727 aa13.41□□□□□ -0.26
TMEM53-206ENST00000420706 FIGNQ5HY92 759 aa13.41□□□□□ -0.26
TMEM53-206ENST00000420706 IQCEQ6IPM2 695 aa13.41□□□□□ -0.26
TMEM53-206ENST00000420706 CHRDL2Q6WN34 429 aa13.41□□□□□ -0.26
TMEM53-206ENST00000420706 RRAGAQ7L523 313 aa13.41□□□□□ -0.26
TMEM53-206ENST00000420706 DRC7Q8IY82 874 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms