RNA–Protein interactions for RNA: ENST00000417665.5

NPHP1-204, Transcript of nephrocystin 1, humanhuman

TSL 5 BASIC

Gene NPHP1, Length 2,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-204ENST00000417665 LRRC55Q6ZSA7 311 aa6.26□□□□□ -1.41
NPHP1-204ENST00000417665 NET1Q7Z628 596 aaPredicted RBP6.26□□□□□ -1.41
NPHP1-204ENST00000417665 ADGRG6Q86SQ4 1221 aa6.26□□□□□ -1.41
NPHP1-204ENST00000417665 SCYL3Q8IZE3 742 aa6.26□□□□□ -1.41
NPHP1-204ENST00000417665 PTCD3Q96EY7 689 aaKnown RBP6.26□□□□□ -1.41
NPHP1-204ENST00000417665 VPS50Q96JG6 964 aa6.26□□□□□ -1.41
NPHP1-204ENST00000417665 ZNF512BQ96KM6 892 aaPredicted RBP6.26□□□□□ -1.41
NPHP1-204ENST00000417665 ZFRQ96KR1 1074 aaKnown RBP6.26□□□□□ -1.41
NPHP1-204ENST00000417665 PRICKLE1Q96MT3 831 aaPredicted RBP6.26□□□□□ -1.41
NPHP1-204ENST00000417665 STRBPQ96SI9 672 aaKnown RBP6.26□□□□□ -1.41
NPHP1-204ENST00000417665 CCDC77Q9BR77 488 aa6.26□□□□□ -1.41
NPHP1-204ENST00000417665 GPAMQ9HCL2 828 aa6.26□□□□□ -1.41
NPHP1-204ENST00000417665 PLK2Q9NYY3 685 aa6.26□□□□□ -1.41
NPHP1-204ENST00000417665 DMTF1Q9Y222 760 aa6.26□□□□□ -1.41
NPHP1-204ENST00000417665 TRAF3IP3Q9Y228 551 aa6.26□□□□□ -1.41
NPHP1-204ENST00000417665 COL4A3BPQ9Y5P4 624 aa6.26□□□□□ -1.41
NPHP1-204ENST00000417665 NUP98P52948 1817 aa6.26□□□□□ -1.41
NPHP1-204ENST00000417665 SYNGAP1Q96PV0 1343 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 ZNF532Q9HCE3 1301 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 A0A1W2PRG0 241 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 VILLO15195 856 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 FKBP6O75344 327 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 KRT38O76015 456 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 PCCAP05165 728 aaPredicted RBP6.25□□□□□ -1.41
NPHP1-204ENST00000417665 SNRPA1P09661 255 aaKnown RBP6.25□□□□□ -1.41
NPHP1-204ENST00000417665 UQCRBP14927 111 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 PLCG1P19174 1290 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 ADORA1P30542 326 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 PRKCIP41743 596 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 GRIA2P42262 883 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 HALP42357 657 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 CHN2P52757 468 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 ARFIP2P53365 341 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 ARHGAP4P98171 946 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 PTK2Q05397 1052 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 DNAJC3Q13217 504 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 PPP2R5CQ13362 524 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 SCARF1Q14162 830 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 KIF22Q14807 665 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 KRT72Q14CN4 511 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 TNIP1Q15025 636 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 PDK4Q16654 411 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 PTPROQ16827 1216 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 CCDC153Q494R4 210 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 CCDC62Q6P9F0 684 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 KLHL35Q6PF15 583 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 KLHDC10Q6PID8 442 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 FBXO46Q6PJ61 603 aaPredicted RBP6.25□□□□□ -1.41
NPHP1-204ENST00000417665 RBM44Q6ZP01 1051 aaKnown RBP6.25□□□□□ -1.41
NPHP1-204ENST00000417665 ZNF571Q7Z3V5 609 aaPredicted RBP6.25□□□□□ -1.41
NPHP1-204ENST00000417665 CATIPQ7Z7H3 387 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 MTDHQ86UE4 582 aaKnown RBP6.25□□□□□ -1.41
NPHP1-204ENST00000417665 CABP7Q86V35 215 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 RASSF3Q86WH2 238 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 SFR1Q86XK3 245 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 PDSS2Q86YH6 399 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 SAMD3Q8N6K7 520 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 SCAIQ8N9R8 606 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 OR6Y1Q8NGX8 325 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 CEP70Q8NHQ1 597 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 ZNF296Q8WUU4 475 aaPredicted RBP6.25□□□□□ -1.41
NPHP1-204ENST00000417665 DNAJC1Q96KC8 554 aaKnown RBP6.25□□□□□ -1.41
NPHP1-204ENST00000417665 ZMAT2Q96NC0 199 aaKnown RBP6.25□□□□□ -1.41
NPHP1-204ENST00000417665 ZKSCAN3Q9BRR0 538 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 NACAP1Q9BZK3 213 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 USP29Q9HBJ7 922 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 ERVK-5Q9HDB9 667 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 FAF1Q9UNN5 650 aaPredicted RBP6.25□□□□□ -1.41
NPHP1-204ENST00000417665 HBS1LQ9Y450 684 aaKnown RBP6.25□□□□□ -1.41
NPHP1-204ENST00000417665 NR2E1Q9Y466 385 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 TELO2Q9Y4R8 837 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 WASF2Q9Y6W5 498 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 CEP290O15078 2479 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 FRMPD4Q14CM0 1322 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 CUL9Q8IWT3 2517 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 SH3PXD2BA1X283 911 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 BOLA2-SMG1P6H3BVE0 249 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 LSM1O15116 133 aaKnown RBP6.25□□□□□ -1.41
NPHP1-204ENST00000417665 MAGEB3O15480 346 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 PRPF4O43172 522 aaKnown RBP eCLIP6.25□□□□□ -1.41
NPHP1-204ENST00000417665 ZNF862O60290 1169 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 DNAJC6O75061 913 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 SERPINB7O75635 380 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 IDH1O75874 414 aaKnown RBP6.25□□□□□ -1.41
NPHP1-204ENST00000417665 RAD17O75943 681 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 STK10O94804 968 aaKnown RBP6.25□□□□□ -1.41
NPHP1-204ENST00000417665 TTC4O95801 387 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 S100A1P23297 94 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 CTNNA2P26232 953 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 PGM1P36871 562 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 FKBP3Q00688 224 aaKnown RBP6.25□□□□□ -1.41
NPHP1-204ENST00000417665 ITGA7Q13683 1181 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 SYCP2LQ5T4T6 812 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 UBAP2Q5T6F2 1119 aaKnown RBP6.25□□□□□ -1.41
NPHP1-204ENST00000417665 TMCO4Q5TGY1 634 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 C3orf67Q6ZVT6 689 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 IRF2BP2Q7Z5L9 587 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 CCDC25Q86WR0 208 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 RASAL3Q86YV0 1011 aa6.25□□□□□ -1.41
NPHP1-204ENST00000417665 MICALL2Q8IY33 904 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms