RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 DLATP10515 647 aaKnown RBP24.96■■□□□ 1.59
SMARCB1-205ENST00000417137 TNNI1P19237 187 aa24.96■■□□□ 1.59
SMARCB1-205ENST00000417137 BRCC3P46736 316 aa24.96■■□□□ 1.59
SMARCB1-205ENST00000417137 WNT7BP56706 349 aa24.96■■□□□ 1.59
SMARCB1-205ENST00000417137 LRRC63Q05C16 580 aa24.96■■□□□ 1.59
SMARCB1-205ENST00000417137 DUSP6Q16828 381 aa24.96■■□□□ 1.59
SMARCB1-205ENST00000417137 ZCWPW2Q504Y3 356 aa24.96■■□□□ 1.59
SMARCB1-205ENST00000417137 PPFIBP1Q86W92 1011 aa24.96■■□□□ 1.59
SMARCB1-205ENST00000417137 EFHBQ8N7U6 833 aa24.96■■□□□ 1.59
SMARCB1-205ENST00000417137 GPT2Q8TD30 523 aa24.96■■□□□ 1.59
SMARCB1-205ENST00000417137 RIN2Q8WYP3 895 aaPredicted RBP24.96■■□□□ 1.59
SMARCB1-205ENST00000417137 HLA-CQ95604 372 aa24.96■■□□□ 1.59
SMARCB1-205ENST00000417137 ITGA11Q9UKX5 1188 aa24.96■■□□□ 1.59
SMARCB1-205ENST00000417137 SYN3O14994 580 aa24.95■■□□□ 1.58
SMARCB1-205ENST00000417137 CETN3O15182 167 aa24.95■■□□□ 1.58
SMARCB1-205ENST00000417137 SRGAP2BP0DMP2 458 aa24.95■■□□□ 1.58
SMARCB1-205ENST00000417137 FGFR3P22607 806 aa24.95■■□□□ 1.58
SMARCB1-205ENST00000417137 CCNE1P24864 410 aa24.95■■□□□ 1.58
SMARCB1-205ENST00000417137 PNPLA4P41247 253 aa24.95■■□□□ 1.58
SMARCB1-205ENST00000417137 FKBP3Q00688 224 aaKnown RBP24.95■■□□□ 1.58
SMARCB1-205ENST00000417137 PABPC5Q96DU9 382 aaKnown RBP24.95■■□□□ 1.58
SMARCB1-205ENST00000417137 SUSD3Q96L08 255 aa24.95■■□□□ 1.58
SMARCB1-205ENST00000417137 CGRRF1Q99675 332 aa24.95■■□□□ 1.58
SMARCB1-205ENST00000417137 RXFP1Q9HBX9 757 aa24.95■■□□□ 1.58
SMARCB1-205ENST00000417137 TRIP11Q15643 1979 aa24.94■■□□□ 1.58
SMARCB1-205ENST00000417137 BICDL2A1A5D9 508 aa24.94■■□□□ 1.58
SMARCB1-205ENST00000417137 ARHGEF37A1IGU5 675 aa24.94■■□□□ 1.58
SMARCB1-205ENST00000417137 BMP6P22004 513 aa24.94■■□□□ 1.58
SMARCB1-205ENST00000417137 IGFBP6P24592 240 aaPredicted RBP24.94■■□□□ 1.58
SMARCB1-205ENST00000417137 KLRC2P26717 231 aa24.94■■□□□ 1.58
SMARCB1-205ENST00000417137 PSMC2P35998 433 aaKnown RBP24.94■■□□□ 1.58
SMARCB1-205ENST00000417137 AP3M2P53677 418 aa24.94■■□□□ 1.58
SMARCB1-205ENST00000417137 LILRA4P59901 499 aa24.94■■□□□ 1.58
SMARCB1-205ENST00000417137 RBP5P82980 135 aa24.94■■□□□ 1.58
SMARCB1-205ENST00000417137 ADAM15Q13444 863 aa24.94■■□□□ 1.58
SMARCB1-205ENST00000417137 ANKRD40Q6AI12 368 aa24.94■■□□□ 1.58
SMARCB1-205ENST00000417137 DSTYKQ6XUX3 929 aa24.94■■□□□ 1.58
SMARCB1-205ENST00000417137 EP400NLQ6ZTU2 488 aa24.94■■□□□ 1.58
SMARCB1-205ENST00000417137 CSGALNACT2Q8N6G5 542 aa24.94■■□□□ 1.58
SMARCB1-205ENST00000417137 APPL2Q8NEU8 664 aa24.94■■□□□ 1.58
SMARCB1-205ENST00000417137 PIK3R5Q8WYR1 880 aa24.94■■□□□ 1.58
SMARCB1-205ENST00000417137 B3GALT6Q96L58 329 aa24.94■■□□□ 1.58
SMARCB1-205ENST00000417137 ZNF560Q96MR9 790 aa24.94■■□□□ 1.58
SMARCB1-205ENST00000417137 KLHL5Q96PQ7 755 aa24.94■■□□□ 1.58
SMARCB1-205ENST00000417137 CLDND1Q9NY35 253 aa24.94■■□□□ 1.58
SMARCB1-205ENST00000417137 FNIP2Q9P278 1114 aa24.94■■□□□ 1.58
SMARCB1-205ENST00000417137 PPP1R3GB7ZBB8 358 aa24.93■■□□□ 1.58
SMARCB1-205ENST00000417137 I3L4J1 428 aa24.93■■□□□ 1.58
SMARCB1-205ENST00000417137 CLASP2O75122 1294 aaKnown RBP24.93■■□□□ 1.58
SMARCB1-205ENST00000417137 ADH1AP07327 375 aa24.93■■□□□ 1.58
SMARCB1-205ENST00000417137 CNPP09543 421 aaKnown RBP24.93■■□□□ 1.58
SMARCB1-205ENST00000417137 KRT13P13646 458 aa24.93■■□□□ 1.58
SMARCB1-205ENST00000417137 CASP4P49662 377 aa24.93■■□□□ 1.58
SMARCB1-205ENST00000417137 TAF6P49848 677 aa24.93■■□□□ 1.58
SMARCB1-205ENST00000417137 COL19A1Q14993 1142 aa24.93■■□□□ 1.58
SMARCB1-205ENST00000417137 RTP2Q5QGT7 225 aa24.93■■□□□ 1.58
SMARCB1-205ENST00000417137 KLHL10Q6JEL2 608 aa24.93■■□□□ 1.58
SMARCB1-205ENST00000417137 ANKS3Q6ZW76 656 aa24.93■■□□□ 1.58
SMARCB1-205ENST00000417137 C1orf127Q8N9H9 656 aa24.93■■□□□ 1.58
SMARCB1-205ENST00000417137 TMC2Q8TDI7 906 aa24.93■■□□□ 1.58
SMARCB1-205ENST00000417137 MTMR12Q9C0I1 747 aa24.93■■□□□ 1.58
SMARCB1-205ENST00000417137 PCDHB8Q9UN66 801 aa24.93■■□□□ 1.58
SMARCB1-205ENST00000417137 AGAP1Q9UPQ3 857 aa24.93■■□□□ 1.58
SMARCB1-205ENST00000417137 TRANK1O15050 2925 aa24.92■■□□□ 1.58
SMARCB1-205ENST00000417137 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.92■■□□□ 1.58
SMARCB1-205ENST00000417137 ITGB3P05106 788 aa24.92■■□□□ 1.58
SMARCB1-205ENST00000417137 KRT19P08727 400 aa24.92■■□□□ 1.58
SMARCB1-205ENST00000417137 CD44P16070 742 aaKnown RBP24.92■■□□□ 1.58
SMARCB1-205ENST00000417137 GTF2F1P35269 517 aaKnown RBP eCLIP24.92■■□□□ 1.58
SMARCB1-205ENST00000417137 AARSP49588 968 aaKnown RBP eCLIP24.92■■□□□ 1.58
SMARCB1-205ENST00000417137 CTC1Q2NKJ3 1217 aa24.92■■□□□ 1.58
SMARCB1-205ENST00000417137 SV2CQ496J9 727 aa24.92■■□□□ 1.58
SMARCB1-205ENST00000417137 LMBRD2Q68DH5 695 aaPredicted RBP24.92■■□□□ 1.58
SMARCB1-205ENST00000417137 FOXR2Q6PJQ5 311 aa24.92■■□□□ 1.58
SMARCB1-205ENST00000417137 INTS8Q75QN2 995 aaKnown RBP24.92■■□□□ 1.58
SMARCB1-205ENST00000417137 FAM186BQ8IYM0 893 aa24.92■■□□□ 1.58
SMARCB1-205ENST00000417137 MLKLQ8NB16 471 aa24.92■■□□□ 1.58
SMARCB1-205ENST00000417137 PARD3BQ8TEW8 1205 aa24.92■■□□□ 1.58
SMARCB1-205ENST00000417137 NELFBQ8WX92 580 aa24.92■■□□□ 1.58
SMARCB1-205ENST00000417137 POP1Q99575 1024 aaKnown RBP24.92■■□□□ 1.58
SMARCB1-205ENST00000417137 MKNK1Q9BUB5 465 aa24.92■■□□□ 1.58
SMARCB1-205ENST00000417137 UBE2ZQ9H832 354 aaPredicted RBP24.92■■□□□ 1.58
SMARCB1-205ENST00000417137 H7C4K7 107 aa24.91■■□□□ 1.58
SMARCB1-205ENST00000417137 M0QZQ0 153 aa24.91■■□□□ 1.58
SMARCB1-205ENST00000417137 AKAP3O75969 853 aa24.91■■□□□ 1.58
SMARCB1-205ENST00000417137 EPB41P11171 864 aaKnown RBP24.91■■□□□ 1.58
SMARCB1-205ENST00000417137 TKTP29401 623 aaKnown RBP24.91■■□□□ 1.58
SMARCB1-205ENST00000417137 POLR2BP30876 1174 aaKnown RBP24.91■■□□□ 1.58
SMARCB1-205ENST00000417137 ENPEPQ07075 957 aa24.91■■□□□ 1.58
SMARCB1-205ENST00000417137 PSMD5Q16401 504 aa24.91■■□□□ 1.58
SMARCB1-205ENST00000417137 TMEM130Q8N3G9 435 aa24.91■■□□□ 1.58
SMARCB1-205ENST00000417137 LRRC52Q8N7C0 313 aa24.91■■□□□ 1.58
SMARCB1-205ENST00000417137 OR5B17Q8NGF7 314 aa24.91■■□□□ 1.58
SMARCB1-205ENST00000417137 LNX1Q8TBB1 728 aaPredicted RBP24.91■■□□□ 1.58
SMARCB1-205ENST00000417137 THEGQ9P2T0 379 aa24.91■■□□□ 1.58
SMARCB1-205ENST00000417137 VCANP13611 3396 aa24.91■■□□□ 1.58
SMARCB1-205ENST00000417137 EYSQ5T1H1 3165 aa24.91■■□□□ 1.58
SMARCB1-205ENST00000417137 PPEF2O14830 753 aa24.9■■□□□ 1.58
SMARCB1-205ENST00000417137 IKBKBO14920 756 aa24.9■■□□□ 1.58
SMARCB1-205ENST00000417137 TEX28O15482 410 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms