RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 TBC1D32Q96NH3 1257 aa16.18■□□□□ 0.18
RPS28-201ENST00000417088 HAPLN2Q9GZV7 340 aa16.18■□□□□ 0.18
RPS28-201ENST00000417088 LTB4R2Q9NPC1 389 aa16.18■□□□□ 0.18
RPS28-201ENST00000417088 TUBGCP4Q9UGJ1 667 aa16.18■□□□□ 0.18
RPS28-201ENST00000417088 KCNG1Q9UIX4 513 aa16.18■□□□□ 0.18
RPS28-201ENST00000417088 KIF3AQ9Y496 699 aa16.18■□□□□ 0.18
RPS28-201ENST00000417088 INSL5Q9Y5Q6 135 aa16.18■□□□□ 0.18
RPS28-201ENST00000417088 NPHP3-ACAD11A0A0J9YXS1 232 aa16.17■□□□□ 0.18
RPS28-201ENST00000417088 VWA3AA6NCI4 1184 aa16.17■□□□□ 0.18
RPS28-201ENST00000417088 NRG2O14511 850 aaPredicted RBP16.17■□□□□ 0.18
RPS28-201ENST00000417088 ZNF197O14709 1029 aa16.17■□□□□ 0.18
RPS28-201ENST00000417088 CLDN3O15551 220 aa16.17■□□□□ 0.18
RPS28-201ENST00000417088 MICAL2O94851 1124 aa16.17■□□□□ 0.18
RPS28-201ENST00000417088 PLA2G4BP0C869 781 aa16.17■□□□□ 0.18
RPS28-201ENST00000417088 FCARP24071 287 aa16.17■□□□□ 0.18
RPS28-201ENST00000417088 CCR2P41597 374 aa16.17■□□□□ 0.18
RPS28-201ENST00000417088 CACNB1Q02641 598 aaPredicted RBP16.17■□□□□ 0.18
RPS28-201ENST00000417088 ADCY1Q08828 1119 aa16.17■□□□□ 0.18
RPS28-201ENST00000417088 ZNF280DQ6N043 979 aa16.17■□□□□ 0.18
RPS28-201ENST00000417088 TPRG1Q6ZUI0 275 aa16.17■□□□□ 0.18
RPS28-201ENST00000417088 TMEM130Q8N3G9 435 aa16.17■□□□□ 0.18
RPS28-201ENST00000417088 APPL2Q8NEU8 664 aa16.17■□□□□ 0.18
RPS28-201ENST00000417088 PLEKHA5Q9HAU0 1116 aa16.17■□□□□ 0.18
RPS28-201ENST00000417088 SPATA6Q9NWH7 488 aaPredicted RBP16.17■□□□□ 0.18
RPS28-201ENST00000417088 AFF4Q9UHB7 1163 aaKnown RBP16.17■□□□□ 0.18
RPS28-201ENST00000417088 PCDHB8Q9UN66 801 aa16.17■□□□□ 0.18
RPS28-201ENST00000417088 FANCMQ8IYD8 2048 aa16.16■□□□□ 0.18
RPS28-201ENST00000417088 MIA3Q5JRA6 1907 aa16.16■□□□□ 0.18
RPS28-201ENST00000417088 SHISA7A6NL88 538 aa16.16■□□□□ 0.18
RPS28-201ENST00000417088 LAMTOR5O43504 91 aa16.16■□□□□ 0.18
RPS28-201ENST00000417088 CLTAP09496 248 aa16.16■□□□□ 0.18
RPS28-201ENST00000417088 CXCL8P10145 99 aa16.16■□□□□ 0.18
RPS28-201ENST00000417088 TARSP26639 723 aaKnown RBP16.16■□□□□ 0.18
RPS28-201ENST00000417088 SPAG1Q07617 926 aa16.16■□□□□ 0.18
RPS28-201ENST00000417088 ZBTB6Q15916 424 aa16.16■□□□□ 0.18
RPS28-201ENST00000417088 ZNF528Q3MIS6 628 aa16.16■□□□□ 0.18
RPS28-201ENST00000417088 TMEM119Q4V9L6 283 aa16.16■□□□□ 0.18
RPS28-201ENST00000417088 ARSHQ5FYA8 562 aa16.16■□□□□ 0.18
RPS28-201ENST00000417088 FAM78AQ5JUQ0 283 aa16.16■□□□□ 0.18
RPS28-201ENST00000417088 ZBTB41Q5SVQ8 909 aa16.16■□□□□ 0.18
RPS28-201ENST00000417088 PDZD4Q76G19 769 aaPredicted RBP16.16■□□□□ 0.18
RPS28-201ENST00000417088 HS6ST3Q8IZP7 471 aa16.16■□□□□ 0.18
RPS28-201ENST00000417088 CLDN23Q96B33 292 aa16.16■□□□□ 0.18
RPS28-201ENST00000417088 NELL2Q99435 816 aa16.16■□□□□ 0.18
RPS28-201ENST00000417088 HEBP1Q9NRV9 189 aa16.16■□□□□ 0.18
RPS28-201ENST00000417088 KCND2Q9NZV8 630 aa16.16■□□□□ 0.18
RPS28-201ENST00000417088 CEP72Q9P209 647 aa16.16■□□□□ 0.18
RPS28-201ENST00000417088 FBXO4Q9UKT5 387 aa16.16■□□□□ 0.18
RPS28-201ENST00000417088 F5P12259 2224 aa16.16■□□□□ 0.18
RPS28-201ENST00000417088 TTC26A0AVF1 554 aa16.15■□□□□ 0.18
RPS28-201ENST00000417088 M0QZQ0 153 aa16.15■□□□□ 0.18
RPS28-201ENST00000417088 MOSPD3O75425 235 aa16.15■□□□□ 0.18
RPS28-201ENST00000417088 MARCKSP29966 332 aaPredicted RBP16.15■□□□□ 0.18
RPS28-201ENST00000417088 LRPAP1P30533 357 aa16.15■□□□□ 0.18
RPS28-201ENST00000417088 MATR3P43243 847 aaKnown RBP eCLIP16.15■□□□□ 0.18
RPS28-201ENST00000417088 MAGEA9P43362 315 aa16.15■□□□□ 0.18
RPS28-201ENST00000417088 NCKAP1LP55160 1127 aa16.15■□□□□ 0.18
RPS28-201ENST00000417088 TWF1Q12792 350 aa16.15■□□□□ 0.18
RPS28-201ENST00000417088 GRM2Q14416 872 aa16.15■□□□□ 0.18
RPS28-201ENST00000417088 RABEP1Q15276 862 aa16.15■□□□□ 0.18
RPS28-201ENST00000417088 CYP4A22Q5TCH4 519 aa16.15■□□□□ 0.18
RPS28-201ENST00000417088 ARL6IP4Q66PJ3 421 aaKnown RBP16.15■□□□□ 0.18
RPS28-201ENST00000417088 RNF19BQ6ZMZ0 732 aa16.15■□□□□ 0.18
RPS28-201ENST00000417088 HAUS6Q7Z4H7 955 aa16.15■□□□□ 0.18
RPS28-201ENST00000417088 SUMF1Q8NBK3 374 aa16.15■□□□□ 0.18
RPS28-201ENST00000417088 DNASE1L2Q92874 299 aa16.15■□□□□ 0.18
RPS28-201ENST00000417088 KCNN1Q92952 543 aa16.15■□□□□ 0.18
RPS28-201ENST00000417088 CDK5RAP3Q96JB5 506 aa16.15■□□□□ 0.18
RPS28-201ENST00000417088 TMX3Q96JJ7 454 aa16.15■□□□□ 0.18
RPS28-201ENST00000417088 ZNF512Q96ME7 567 aaPredicted RBP16.15■□□□□ 0.18
RPS28-201ENST00000417088 ASB16Q96NS5 453 aa16.15■□□□□ 0.18
RPS28-201ENST00000417088 ZFP14Q9HCL3 533 aa16.15■□□□□ 0.18
RPS28-201ENST00000417088 LARSQ9P2J5 1176 aaKnown RBP16.15■□□□□ 0.18
RPS28-201ENST00000417088 MAFFQ9ULX9 164 aa16.15■□□□□ 0.18
RPS28-201ENST00000417088 CACNA1AO00555 2505 aa16.15■□□□□ 0.18
RPS28-201ENST00000417088 OAZ2O95190 189 aa16.14■□□□□ 0.17
RPS28-201ENST00000417088 CPB1P15086 417 aa16.14■□□□□ 0.17
RPS28-201ENST00000417088 TNFSF9P41273 254 aa16.14■□□□□ 0.17
RPS28-201ENST00000417088 AARSP49588 968 aaKnown RBP eCLIP16.14■□□□□ 0.17
RPS28-201ENST00000417088 CSTF1Q05048 431 aaKnown RBP16.14■□□□□ 0.17
RPS28-201ENST00000417088 FZD5Q13467 585 aa16.14■□□□□ 0.17
RPS28-201ENST00000417088 IQCEQ6IPM2 695 aa16.14■□□□□ 0.17
RPS28-201ENST00000417088 ZNF852Q6ZMS4 543 aa16.14■□□□□ 0.17
RPS28-201ENST00000417088 ERMP1Q7Z2K6 904 aa16.14■□□□□ 0.17
RPS28-201ENST00000417088 KIAA2013Q8IYS2 634 aa16.14■□□□□ 0.17
RPS28-201ENST00000417088 ELMOD1Q8N336 334 aa16.14■□□□□ 0.17
RPS28-201ENST00000417088 BEST2Q8NFU1 509 aa16.14■□□□□ 0.17
RPS28-201ENST00000417088 RUBCNQ92622 972 aa16.14■□□□□ 0.17
RPS28-201ENST00000417088 KIF12Q96FN5 646 aa16.14■□□□□ 0.17
RPS28-201ENST00000417088 ZSWIM3Q96MP5 696 aa16.14■□□□□ 0.17
RPS28-201ENST00000417088 UBQLN1Q9UMX0 589 aaKnown RBP16.14■□□□□ 0.17
RPS28-201ENST00000417088 TIMM13Q9Y5L4 95 aaPredicted RBP16.14■□□□□ 0.17
RPS28-201ENST00000417088 MYH11P35749 1972 aa16.14■□□□□ 0.17
RPS28-201ENST00000417088 PDCD11Q14690 1871 aaKnown RBP16.14■□□□□ 0.17
RPS28-201ENST00000417088 CEP250Q9BV73 2442 aa16.13■□□□□ 0.17
RPS28-201ENST00000417088 LACTBL1A8MY62 500 aa16.13■□□□□ 0.17
RPS28-201ENST00000417088 H0YCG3 227 aa16.13■□□□□ 0.17
RPS28-201ENST00000417088 H3BQV1 296 aa16.13■□□□□ 0.17
RPS28-201ENST00000417088 NCAM2O15394 837 aa16.13■□□□□ 0.17
RPS28-201ENST00000417088 FAM189A1O60320 539 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms