RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 INSL5Q9Y5Q6 135 aa14.14□□□□□ -0.15
LINC00339-202ENST00000416769 E9PMD0 336 aa14.13□□□□□ -0.15
LINC00339-202ENST00000416769 PRRG1O14668 218 aa14.13□□□□□ -0.15
LINC00339-202ENST00000416769 SPTLC1O15269 473 aa14.13□□□□□ -0.15
LINC00339-202ENST00000416769 VNN2O95498 520 aa14.13□□□□□ -0.15
LINC00339-202ENST00000416769 OR4Q2P0C623 313 aa14.13□□□□□ -0.15
LINC00339-202ENST00000416769 CDC25AP30304 524 aa14.13□□□□□ -0.15
LINC00339-202ENST00000416769 DDIT3P35638 169 aa14.13□□□□□ -0.15
LINC00339-202ENST00000416769 CCT6AP40227 531 aaKnown RBP14.13□□□□□ -0.15
LINC00339-202ENST00000416769 GRM5P41594 1212 aa14.13□□□□□ -0.15
LINC00339-202ENST00000416769 NPTX2P47972 431 aa14.13□□□□□ -0.15
LINC00339-202ENST00000416769 PEX3P56589 373 aa14.13□□□□□ -0.15
LINC00339-202ENST00000416769 PFKPQ01813 784 aa14.13□□□□□ -0.15
LINC00339-202ENST00000416769 SPAG1Q07617 926 aa14.13□□□□□ -0.15
LINC00339-202ENST00000416769 MAPK7Q13164 816 aa14.13□□□□□ -0.15
LINC00339-202ENST00000416769 SRSF5Q13243 272 aaKnown RBP14.13□□□□□ -0.15
LINC00339-202ENST00000416769 GAS6Q14393 721 aa14.13□□□□□ -0.15
LINC00339-202ENST00000416769 ZNF568Q3ZCX4 644 aa14.13□□□□□ -0.15
LINC00339-202ENST00000416769 XKR4Q5GH76 650 aa14.13□□□□□ -0.15
LINC00339-202ENST00000416769 PDXDC1Q6P996 788 aa14.13□□□□□ -0.15
LINC00339-202ENST00000416769 ANKS3Q6ZW76 656 aa14.13□□□□□ -0.15
LINC00339-202ENST00000416769 KCNK18Q7Z418 384 aa14.13□□□□□ -0.15
LINC00339-202ENST00000416769 ZNF461Q8TAF7 563 aa14.13□□□□□ -0.15
LINC00339-202ENST00000416769 ACO2Q99798 780 aaKnown RBP14.13□□□□□ -0.15
LINC00339-202ENST00000416769 CRISPLD1Q9H336 500 aa14.13□□□□□ -0.15
LINC00339-202ENST00000416769 DDX19AQ9NUU7 478 aaKnown RBP14.13□□□□□ -0.15
LINC00339-202ENST00000416769 TUBGCP4Q9UGJ1 667 aa14.13□□□□□ -0.15
LINC00339-202ENST00000416769 KIAA1024Q9UPX6 916 aa14.13□□□□□ -0.15
LINC00339-202ENST00000416769 TNFSF13BQ9Y275 285 aa14.13□□□□□ -0.15
LINC00339-202ENST00000416769 PCDHGA2Q9Y5H1 932 aa14.13□□□□□ -0.15
LINC00339-202ENST00000416769 CHD8Q9HCK8 2581 aa14.13□□□□□ -0.15
LINC00339-202ENST00000416769 CNOT1A5YKK6 2376 aaKnown RBP14.12□□□□□ -0.15
LINC00339-202ENST00000416769 CCDC169A6NNP5 214 aa14.12□□□□□ -0.15
LINC00339-202ENST00000416769 SFI1A8K8P3 1242 aa14.12□□□□□ -0.15
LINC00339-202ENST00000416769 HIP1RO75146 1068 aa14.12□□□□□ -0.15
LINC00339-202ENST00000416769 LRG1P02750 347 aa14.12□□□□□ -0.15
LINC00339-202ENST00000416769 PTPN2P17706 415 aa14.12□□□□□ -0.15
LINC00339-202ENST00000416769 SOX9P48436 509 aa14.12□□□□□ -0.15
LINC00339-202ENST00000416769 ADCY1Q08828 1119 aa14.12□□□□□ -0.15
LINC00339-202ENST00000416769 TWF1Q12792 350 aa14.12□□□□□ -0.15
LINC00339-202ENST00000416769 MRPL58Q14197 206 aaKnown RBP14.12□□□□□ -0.15
LINC00339-202ENST00000416769 TEAD2Q15562 447 aa14.12□□□□□ -0.15
LINC00339-202ENST00000416769 IL17AQ16552 155 aa14.12□□□□□ -0.15
LINC00339-202ENST00000416769 TTC38Q5R3I4 469 aa14.12□□□□□ -0.15
LINC00339-202ENST00000416769 STXBP5Q5T5C0 1151 aa14.12□□□□□ -0.15
LINC00339-202ENST00000416769 ZNF852Q6ZMS4 543 aa14.12□□□□□ -0.15
LINC00339-202ENST00000416769 ELSPBP1Q96BH3 223 aa14.12□□□□□ -0.15
LINC00339-202ENST00000416769 ASB16Q96NS5 453 aa14.12□□□□□ -0.15
LINC00339-202ENST00000416769 FOXP1Q9H334 677 aaPredicted RBP14.12□□□□□ -0.15
LINC00339-202ENST00000416769 BRD9Q9H8M2 597 aa14.12□□□□□ -0.15
LINC00339-202ENST00000416769 RBM12Q9NTZ6 932 aaKnown RBP14.12□□□□□ -0.15
LINC00339-202ENST00000416769 GDE1Q9NZC3 331 aa14.12□□□□□ -0.15
LINC00339-202ENST00000416769 USP18Q9UMW8 372 aa14.12□□□□□ -0.15
LINC00339-202ENST00000416769 TIMM13Q9Y5L4 95 aaPredicted RBP14.12□□□□□ -0.15
LINC00339-202ENST00000416769 K7ERI5 159 aa14.11□□□□□ -0.15
LINC00339-202ENST00000416769 MYL4P12829 197 aa14.11□□□□□ -0.15
LINC00339-202ENST00000416769 ATF2P15336 505 aa14.11□□□□□ -0.15
LINC00339-202ENST00000416769 PROZP22891 400 aa14.11□□□□□ -0.15
LINC00339-202ENST00000416769 U2AF2P26368 475 aaKnown RBP eCLIP14.11□□□□□ -0.15
LINC00339-202ENST00000416769 GDI1P31150 447 aa14.11□□□□□ -0.15
LINC00339-202ENST00000416769 GUCY2FP51841 1108 aa14.11□□□□□ -0.15
LINC00339-202ENST00000416769 NUCB2P80303 420 aa14.11□□□□□ -0.15
LINC00339-202ENST00000416769 SATB1Q01826 763 aa14.11□□□□□ -0.15
LINC00339-202ENST00000416769 RAD51AP2Q09MP3 1159 aa14.11□□□□□ -0.15
LINC00339-202ENST00000416769 PPP2R5AQ15172 486 aa14.11□□□□□ -0.15
LINC00339-202ENST00000416769 CTXN3Q4LDR2 81 aa14.11□□□□□ -0.15
LINC00339-202ENST00000416769 RNF19BQ6ZMZ0 732 aa14.11□□□□□ -0.15
LINC00339-202ENST00000416769 MAP4K3Q8IVH8 894 aa14.11□□□□□ -0.15
LINC00339-202ENST00000416769 TTC8Q8TAM2 541 aa14.11□□□□□ -0.15
LINC00339-202ENST00000416769 ERMNQ8TAM6 284 aa14.11□□□□□ -0.15
LINC00339-202ENST00000416769 IFT74Q96LB3 600 aa14.11□□□□□ -0.15
LINC00339-202ENST00000416769 UROC1Q96N76 676 aa14.11□□□□□ -0.15
LINC00339-202ENST00000416769 HAPLN2Q9GZV7 340 aa14.11□□□□□ -0.15
LINC00339-202ENST00000416769 CHRDQ9H2X0 955 aa14.11□□□□□ -0.15
LINC00339-202ENST00000416769 AVENQ9NQS1 362 aaPredicted RBP14.11□□□□□ -0.15
LINC00339-202ENST00000416769 ARHGAP28Q9P2N2 729 aa14.11□□□□□ -0.15
LINC00339-202ENST00000416769 CIZ1Q9ULV3 898 aaPredicted RBP14.11□□□□□ -0.15
LINC00339-202ENST00000416769 MTMR6Q9Y217 621 aa14.11□□□□□ -0.15
LINC00339-202ENST00000416769 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.11□□□□□ -0.15
LINC00339-202ENST00000416769 KMT2BQ9UMN6 2715 aaPredicted RBP14.11□□□□□ -0.15
LINC00339-202ENST00000416769 PHLPP2Q6ZVD8 1323 aa14.11□□□□□ -0.15
LINC00339-202ENST00000416769 ANK1P16157 1881 aa14.1□□□□□ -0.15
LINC00339-202ENST00000416769 ATG2BQ96BY7 2078 aa14.1□□□□□ -0.15
LINC00339-202ENST00000416769 VPS37CA5D8V6 355 aaPredicted RBP14.1□□□□□ -0.15
LINC00339-202ENST00000416769 ARNTLO00327 626 aa14.1□□□□□ -0.15
LINC00339-202ENST00000416769 SLC16A4O15374 487 aa14.1□□□□□ -0.15
LINC00339-202ENST00000416769 ELF1P32519 619 aa14.1□□□□□ -0.15
LINC00339-202ENST00000416769 RPS9P46781 194 aaKnown RBP14.1□□□□□ -0.15
LINC00339-202ENST00000416769 TOB1P50616 345 aaPredicted RBP14.1□□□□□ -0.15
LINC00339-202ENST00000416769 EFNA5P52803 228 aa14.1□□□□□ -0.15
LINC00339-202ENST00000416769 SPEM2Q0P670 501 aa14.1□□□□□ -0.15
LINC00339-202ENST00000416769 Q6ZS52 159 aa14.1□□□□□ -0.15
LINC00339-202ENST00000416769 PDZD4Q76G19 769 aaPredicted RBP14.1□□□□□ -0.15
LINC00339-202ENST00000416769 TCEAL8Q8IYN2 117 aa14.1□□□□□ -0.15
LINC00339-202ENST00000416769 TTC9BQ8N6N2 239 aa14.1□□□□□ -0.15
LINC00339-202ENST00000416769 SHKBP1Q8TBC3 707 aa14.1□□□□□ -0.15
LINC00339-202ENST00000416769 ZSCAN18Q8TBC5 510 aaPredicted RBP14.1□□□□□ -0.15
LINC00339-202ENST00000416769 SNX29Q8TEQ0 813 aa14.1□□□□□ -0.15
LINC00339-202ENST00000416769 KIFAP3Q92845 792 aa14.1□□□□□ -0.15
LINC00339-202ENST00000416769 LRRC3BQ96PB8 259 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms