RNA–Protein interactions for RNA: ENST00000414562.1

LINC00330-201, long intergenic non-protein coding RNA 330, humanhuman

TSL 2 BASIC

Gene LINC00330, Length 2,036 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00330-201ENST00000414562 DUSP10Q9Y6W6 482 aa12.14□□□□□ -0.47
LINC00330-201ENST00000414562 MEIS3P2A8K0S8 358 aa12.13□□□□□ -0.47
LINC00330-201ENST00000414562 DYNC1I1O14576 645 aa12.13□□□□□ -0.47
LINC00330-201ENST00000414562 PHACTR2O75167 634 aa12.13□□□□□ -0.47
LINC00330-201ENST00000414562 TACC1O75410 805 aa12.13□□□□□ -0.47
LINC00330-201ENST00000414562 SELPP16109 830 aa12.13□□□□□ -0.47
LINC00330-201ENST00000414562 PIK3CAP42336 1068 aa12.13□□□□□ -0.47
LINC00330-201ENST00000414562 MCL1Q07820 350 aa12.13□□□□□ -0.47
LINC00330-201ENST00000414562 LRRC8DQ7L1W4 858 aa12.13□□□□□ -0.47
LINC00330-201ENST00000414562 CATSPER4Q7RTX7 472 aa12.13□□□□□ -0.47
LINC00330-201ENST00000414562 MNS1Q8NEH6 495 aa12.13□□□□□ -0.47
LINC00330-201ENST00000414562 ZNF516Q92618 1163 aa12.13□□□□□ -0.47
LINC00330-201ENST00000414562 CGRRF1Q99675 332 aa12.13□□□□□ -0.47
LINC00330-201ENST00000414562 RNF39Q9H2S5 420 aa12.13□□□□□ -0.47
LINC00330-201ENST00000414562 HIPK3Q9H422 1215 aa12.13□□□□□ -0.47
LINC00330-201ENST00000414562 TNFSF13BQ9Y275 285 aa12.13□□□□□ -0.47
LINC00330-201ENST00000414562 HES2Q9Y543 173 aa12.13□□□□□ -0.47
LINC00330-201ENST00000414562 DCDC2CA8MYV0 355 aa12.13□□□□□ -0.47
LINC00330-201ENST00000414562 PJA2O43164 708 aa12.13□□□□□ -0.47
LINC00330-201ENST00000414562 RPS6KA5O75582 802 aa12.13□□□□□ -0.47
LINC00330-201ENST00000414562 HLA-DRAP01903 254 aa12.13□□□□□ -0.47
LINC00330-201ENST00000414562 CLDN10P78369 228 aa12.13□□□□□ -0.47
LINC00330-201ENST00000414562 NFX1Q12986 1120 aaKnown RBP12.13□□□□□ -0.47
LINC00330-201ENST00000414562 DSC3Q14574 896 aa12.13□□□□□ -0.47
LINC00330-201ENST00000414562 BMS1Q14692 1282 aaKnown RBP12.13□□□□□ -0.47
LINC00330-201ENST00000414562 RSPH3Q86UC2 560 aa12.13□□□□□ -0.47
LINC00330-201ENST00000414562 BRSK2Q8IWQ3 736 aa12.13□□□□□ -0.47
LINC00330-201ENST00000414562 THNSL1Q8IYQ7 743 aa12.13□□□□□ -0.47
LINC00330-201ENST00000414562 GPR88Q9GZN0 384 aa12.13□□□□□ -0.47
LINC00330-201ENST00000414562 C1orf112Q9NSG2 853 aa12.13□□□□□ -0.47
LINC00330-201ENST00000414562 SEPT11Q9NVA2 429 aaKnown RBP12.13□□□□□ -0.47
LINC00330-201ENST00000414562 CCDC85CA6NKD9 419 aa12.12□□□□□ -0.47
LINC00330-201ENST00000414562 ZC3H11AO75152 810 aaKnown RBP eCLIP12.12□□□□□ -0.47
LINC00330-201ENST00000414562 CLTBP09497 229 aa12.12□□□□□ -0.47
LINC00330-201ENST00000414562 TNFAIP3P21580 790 aa12.12□□□□□ -0.47
LINC00330-201ENST00000414562 OSTNP61366 133 aa12.12□□□□□ -0.47
LINC00330-201ENST00000414562 TUBB2AQ13885 445 aa12.12□□□□□ -0.47
LINC00330-201ENST00000414562 SURF1Q15526 300 aa12.12□□□□□ -0.47
LINC00330-201ENST00000414562 NAB2Q15742 525 aa12.12□□□□□ -0.47
LINC00330-201ENST00000414562 ZACNQ401N2 412 aa12.12□□□□□ -0.47
LINC00330-201ENST00000414562 ALKBH5Q6P6C2 394 aaKnown RBP12.12□□□□□ -0.47
LINC00330-201ENST00000414562 MTERF4Q7Z6M4 381 aaKnown RBP12.12□□□□□ -0.47
LINC00330-201ENST00000414562 CAGE1Q8TC20 777 aa12.12□□□□□ -0.47
LINC00330-201ENST00000414562 KAT5Q92993 513 aa12.12□□□□□ -0.47
LINC00330-201ENST00000414562 FAM81BQ96LP2 452 aa12.12□□□□□ -0.47
LINC00330-201ENST00000414562 ALS2CR12Q96Q35 445 aa12.12□□□□□ -0.47
LINC00330-201ENST00000414562 PI4K2AQ9BTU6 479 aa12.12□□□□□ -0.47
LINC00330-201ENST00000414562 TUBB2BQ9BVA1 445 aa12.12□□□□□ -0.47
LINC00330-201ENST00000414562 SEZ6LQ9BYH1 1024 aa12.12□□□□□ -0.47
LINC00330-201ENST00000414562 TMEM39AQ9NV64 488 aa12.12□□□□□ -0.47
LINC00330-201ENST00000414562 MROH7Q68CQ1 1323 aa12.12□□□□□ -0.47
LINC00330-201ENST00000414562 LAMA3Q16787 3333 aa12.12□□□□□ -0.47
LINC00330-201ENST00000414562 PITPNM1O00562 1244 aa12.11□□□□□ -0.47
LINC00330-201ENST00000414562 ERLIN2O94905 339 aa12.11□□□□□ -0.47
LINC00330-201ENST00000414562 MOCS3O95396 460 aa12.11□□□□□ -0.47
LINC00330-201ENST00000414562 C4BPAP04003 597 aaKnown RBP12.11□□□□□ -0.47
LINC00330-201ENST00000414562 AFF1P51825 1210 aaKnown RBP12.11□□□□□ -0.47
LINC00330-201ENST00000414562 AP3M2P53677 418 aa12.11□□□□□ -0.47
LINC00330-201ENST00000414562 CDC42EP1Q00587 391 aa12.11□□□□□ -0.47
LINC00330-201ENST00000414562 TDRD10Q5VZ19 366 aaKnown RBP12.11□□□□□ -0.47
LINC00330-201ENST00000414562 C15orf39Q6ZRI6 1047 aa12.11□□□□□ -0.47
LINC00330-201ENST00000414562 SMG8Q8ND04 991 aaKnown RBP12.11□□□□□ -0.47
LINC00330-201ENST00000414562 TRIM58Q8NG06 486 aa12.11□□□□□ -0.47
LINC00330-201ENST00000414562 TATDN2Q93075 761 aa12.11□□□□□ -0.47
LINC00330-201ENST00000414562 KREMEN1Q96MU8 473 aa12.11□□□□□ -0.47
LINC00330-201ENST00000414562 NOX5Q96PH1 765 aa12.11□□□□□ -0.47
LINC00330-201ENST00000414562 NAGPAQ9UK23 515 aa12.11□□□□□ -0.47
LINC00330-201ENST00000414562 PIN4Q9Y237 131 aaKnown RBP12.11□□□□□ -0.47
LINC00330-201ENST00000414562 PTPRJQ12913 1337 aa12.11□□□□□ -0.47
LINC00330-201ENST00000414562 KIAA0355O15063 1070 aa12.11□□□□□ -0.47
LINC00330-201ENST00000414562 CAND2O75155 1236 aa12.11□□□□□ -0.47
LINC00330-201ENST00000414562 NPTXRO95502 500 aa12.11□□□□□ -0.47
LINC00330-201ENST00000414562 ATF7P17544 494 aaPredicted RBP12.11□□□□□ -0.47
LINC00330-201ENST00000414562 ENOSF1Q7L5Y1 443 aa12.11□□□□□ -0.47
LINC00330-201ENST00000414562 GLYCTKQ8IVS8 523 aa12.11□□□□□ -0.47
LINC00330-201ENST00000414562 RNF10Q8N5U6 811 aaKnown RBP12.11□□□□□ -0.47
LINC00330-201ENST00000414562 DBF4BQ8NFT6 615 aa12.11□□□□□ -0.47
LINC00330-201ENST00000414562 HELQQ8TDG4 1101 aa12.11□□□□□ -0.47
LINC00330-201ENST00000414562 TSC1Q92574 1164 aa12.11□□□□□ -0.47
LINC00330-201ENST00000414562 ELMO3Q96BJ8 720 aa12.11□□□□□ -0.47
LINC00330-201ENST00000414562 NXF3Q9H4D5 531 aaKnown RBP12.11□□□□□ -0.47
LINC00330-201ENST00000414562 RPF1Q9H9Y2 349 aaKnown RBP12.11□□□□□ -0.47
LINC00330-201ENST00000414562 CPSF3Q9UKF6 684 aaKnown RBP12.11□□□□□ -0.47
LINC00330-201ENST00000414562 MRFAP1Q9Y605 127 aa12.11□□□□□ -0.47
LINC00330-201ENST00000414562 CITO14578 2027 aa12.1□□□□□ -0.47
LINC00330-201ENST00000414562 M0QZ92 97 aa12.1□□□□□ -0.47
LINC00330-201ENST00000414562 DDX3XO00571 662 aaKnown RBP eCLIP12.1□□□□□ -0.47
LINC00330-201ENST00000414562 TLR3O15455 904 aaKnown RBP12.1□□□□□ -0.47
LINC00330-201ENST00000414562 CTIFO43310 598 aaKnown RBP12.1□□□□□ -0.47
LINC00330-201ENST00000414562 H2AFZP0C0S5 128 aa12.1□□□□□ -0.47
LINC00330-201ENST00000414562 KRT5P13647 590 aa12.1□□□□□ -0.47
LINC00330-201ENST00000414562 EPHB4P54760 987 aa12.1□□□□□ -0.47
LINC00330-201ENST00000414562 BFSP2Q13515 415 aa12.1□□□□□ -0.47
LINC00330-201ENST00000414562 PLEKHG4Q58EX7 1191 aa12.1□□□□□ -0.47
LINC00330-201ENST00000414562 H2AFVQ71UI9 128 aa12.1□□□□□ -0.47
LINC00330-201ENST00000414562 C16orf59Q7L2K0 433 aa12.1□□□□□ -0.47
LINC00330-201ENST00000414562 WDR49Q8IV35 697 aa12.1□□□□□ -0.47
LINC00330-201ENST00000414562 OR5B17Q8NGF7 314 aa12.1□□□□□ -0.47
LINC00330-201ENST00000414562 AGPAT1Q99943 283 aa12.1□□□□□ -0.47
LINC00330-201ENST00000414562 CARD6Q9BX69 1037 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms