RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 PPM1LQ5SGD2 360 aa28.58■■■□□ 2.17
VEGFA-207ENST00000413642 LIN9Q5TKA1 542 aa28.58■■■□□ 2.17
VEGFA-207ENST00000413642 SPATA1Q5VX52 437 aa28.58■■■□□ 2.17
VEGFA-207ENST00000413642 RESP18Q5W5W9 173 aa28.58■■■□□ 2.17
VEGFA-207ENST00000413642 CYP26C1Q6V0L0 522 aa28.58■■■□□ 2.17
VEGFA-207ENST00000413642 OTOP3Q7RTS5 596 aa28.58■■■□□ 2.17
VEGFA-207ENST00000413642 SLC7A14Q8TBB6 771 aa28.58■■■□□ 2.17
VEGFA-207ENST00000413642 SAAL1Q96ER3 474 aa28.58■■■□□ 2.17
VEGFA-207ENST00000413642 CUEDC2Q9H467 287 aa28.58■■■□□ 2.17
VEGFA-207ENST00000413642 EXOC7Q9UPT5 735 aa28.58■■■□□ 2.17
VEGFA-207ENST00000413642 TIMM13Q9Y5L4 95 aaPredicted RBP28.58■■■□□ 2.17
VEGFA-207ENST00000413642 CLUHO75153 1309 aa28.58■■■□□ 2.17
VEGFA-207ENST00000413642 CCL16O15467 120 aa28.57■■■□□ 2.16
VEGFA-207ENST00000413642 WNT7BP56706 349 aa28.57■■■□□ 2.16
VEGFA-207ENST00000413642 ASIC1P78348 528 aa28.57■■■□□ 2.16
VEGFA-207ENST00000413642 ROR1Q01973 937 aa28.57■■■□□ 2.16
VEGFA-207ENST00000413642 CD302Q8IX05 232 aa28.57■■■□□ 2.16
VEGFA-207ENST00000413642 SYCP3Q8IZU3 236 aa28.57■■■□□ 2.16
VEGFA-207ENST00000413642 ACSF2Q96CM8 615 aaPredicted RBP28.57■■■□□ 2.16
VEGFA-207ENST00000413642 MYADMQ96S97 322 aa28.57■■■□□ 2.16
VEGFA-207ENST00000413642 FBXL5Q9UKA1 691 aa28.57■■■□□ 2.16
VEGFA-207ENST00000413642 PCDHB8Q9UN66 801 aa28.57■■■□□ 2.16
VEGFA-207ENST00000413642 TMEM221A6NGB7 291 aa28.56■■■□□ 2.16
VEGFA-207ENST00000413642 M0R296 226 aa28.56■■■□□ 2.16
VEGFA-207ENST00000413642 TULP1O00294 542 aaPredicted RBP28.56■■■□□ 2.16
VEGFA-207ENST00000413642 TMEM132DQ14C87 1099 aa28.56■■■□□ 2.16
VEGFA-207ENST00000413642 POSTNQ15063 836 aa28.56■■■□□ 2.16
VEGFA-207ENST00000413642 CTXN3Q4LDR2 81 aa28.56■■■□□ 2.16
VEGFA-207ENST00000413642 SLC8B1Q6J4K2 584 aa28.56■■■□□ 2.16
VEGFA-207ENST00000413642 GRASPQ7Z6J2 395 aaPredicted RBP28.56■■■□□ 2.16
VEGFA-207ENST00000413642 PLCD3Q8N3E9 789 aa28.56■■■□□ 2.16
VEGFA-207ENST00000413642 FAM213AQ9BRX8 229 aa28.56■■■□□ 2.16
VEGFA-207ENST00000413642 LRRC27Q9C0I9 530 aa28.56■■■□□ 2.16
VEGFA-207ENST00000413642 BLZF1Q9H2G9 400 aa28.56■■■□□ 2.16
VEGFA-207ENST00000413642 FAM13BQ9NYF5 915 aa28.56■■■□□ 2.16
VEGFA-207ENST00000413642 WDR27A2RRH5 827 aa28.55■■■□□ 2.16
VEGFA-207ENST00000413642 GOLGA8IPA6NC78 632 aa28.55■■■□□ 2.16
VEGFA-207ENST00000413642 GOLGA8JA6NMD2 632 aa28.55■■■□□ 2.16
VEGFA-207ENST00000413642 XPOTO43592 962 aaKnown RBP28.55■■■□□ 2.16
VEGFA-207ENST00000413642 GBP2P32456 591 aaPredicted RBP28.55■■■□□ 2.16
VEGFA-207ENST00000413642 BEST2Q8NFU1 509 aa28.55■■■□□ 2.16
VEGFA-207ENST00000413642 C7orf25Q9BPX7 421 aa28.55■■■□□ 2.16
VEGFA-207ENST00000413642 CBWD1Q9BRT8 395 aa28.55■■■□□ 2.16
VEGFA-207ENST00000413642 ASB7Q9H672 318 aa28.55■■■□□ 2.16
VEGFA-207ENST00000413642 POLIQ9UNA4 740 aa28.55■■■□□ 2.16
VEGFA-207ENST00000413642 CITO14578 2027 aa28.54■■■□□ 2.16
VEGFA-207ENST00000413642 H7C4K7 107 aa28.54■■■□□ 2.16
VEGFA-207ENST00000413642 M0QZQ0 153 aa28.54■■■□□ 2.16
VEGFA-207ENST00000413642 SPTLC1O15269 473 aa28.54■■■□□ 2.16
VEGFA-207ENST00000413642 HNRNPA1P09651 372 aaKnown RBP eCLIP28.54■■■□□ 2.16
VEGFA-207ENST00000413642 AARSP49588 968 aaKnown RBP eCLIP28.54■■■□□ 2.161e-6■■■■□ 20.6
VEGFA-207ENST00000413642 SIGLEC14Q08ET2 396 aa28.54■■■□□ 2.16
VEGFA-207ENST00000413642 C9orf57Q5W0N0 161 aa28.54■■■□□ 2.16
VEGFA-207ENST00000413642 GRAMD1CQ8IYS0 662 aa28.54■■■□□ 2.16
VEGFA-207ENST00000413642 APPL2Q8NEU8 664 aa28.54■■■□□ 2.16
VEGFA-207ENST00000413642 FAM84AQ96KN4 292 aa28.54■■■□□ 2.16
VEGFA-207ENST00000413642 TSPAN18Q96SJ8 248 aa28.54■■■□□ 2.16
VEGFA-207ENST00000413642 PCIF1Q9H4Z3 704 aa28.54■■■□□ 2.16
VEGFA-207ENST00000413642 SORCS3Q9UPU3 1222 aa28.54■■■□□ 2.16
VEGFA-207ENST00000413642 ABLIM3O94929 683 aa28.53■■■□□ 2.16
VEGFA-207ENST00000413642 HOXD13P35453 343 aa28.53■■■□□ 2.16
VEGFA-207ENST00000413642 AFMP43652 599 aa28.53■■■□□ 2.16
VEGFA-207ENST00000413642 AMPD3Q01432 767 aa28.53■■■□□ 2.16
VEGFA-207ENST00000413642 ALCAMQ13740 583 aa28.53■■■□□ 2.16
VEGFA-207ENST00000413642 DSTYKQ6XUX3 929 aa28.53■■■□□ 2.16
VEGFA-207ENST00000413642 GET4Q7L5D6 327 aaPredicted RBP28.53■■■□□ 2.16
VEGFA-207ENST00000413642 EFCAB13Q8IY85 973 aa28.53■■■□□ 2.16
VEGFA-207ENST00000413642 ST13P5Q8NFI4 369 aaPredicted RBP28.53■■■□□ 2.16
VEGFA-207ENST00000413642 ZNF461Q8TAF7 563 aa28.53■■■□□ 2.16
VEGFA-207ENST00000413642 LEO1Q8WVC0 666 aaPredicted RBP28.53■■■□□ 2.16
VEGFA-207ENST00000413642 ASIC4Q96FT7 647 aa28.53■■■□□ 2.16
VEGFA-207ENST00000413642 HCFC1R1Q9NWW0 138 aa28.53■■■□□ 2.16
VEGFA-207ENST00000413642 SERTAD1Q9UHV2 236 aa28.53■■■□□ 2.16
VEGFA-207ENST00000413642 KCNH3Q9ULD8 1083 aa28.53■■■□□ 2.16
VEGFA-207ENST00000413642 DERAQ9Y315 318 aa28.53■■■□□ 2.16
VEGFA-207ENST00000413642 C2orf16Q68DN1 1984 aa28.53■■■□□ 2.16
VEGFA-207ENST00000413642 SEC24AO95486 1093 aa28.52■■■□□ 2.16
VEGFA-207ENST00000413642 ZNF280DQ6N043 979 aa28.52■■■□□ 2.16
VEGFA-207ENST00000413642 CNNM4Q6P4Q7 775 aa28.52■■■□□ 2.16
VEGFA-207ENST00000413642 NOC3LQ8WTT2 800 aaKnown RBP28.52■■■□□ 2.16
VEGFA-207ENST00000413642 RSAD2Q8WXG1 361 aa28.52■■■□□ 2.16
VEGFA-207ENST00000413642 PBXIP1Q96AQ6 731 aa28.52■■■□□ 2.16
VEGFA-207ENST00000413642 DENND4AQ7Z401 1863 aa28.52■■■□□ 2.16
VEGFA-207ENST00000413642 ANO9A1A5B4 782 aa28.51■■■□□ 2.15
VEGFA-207ENST00000413642 PIRO00625 290 aa28.51■■■□□ 2.15
VEGFA-207ENST00000413642 OR4Q2P0C623 313 aa28.51■■■□□ 2.15
VEGFA-207ENST00000413642 GARTP22102 1010 aa28.51■■■□□ 2.15
VEGFA-207ENST00000413642 HOXA9P31269 272 aa28.51■■■□□ 2.15
VEGFA-207ENST00000413642 LILRA4P59901 499 aa28.51■■■□□ 2.15
VEGFA-207ENST00000413642 MTMR3Q13615 1198 aa28.51■■■□□ 2.15
VEGFA-207ENST00000413642 CUL4BQ13620 913 aa28.51■■■□□ 2.15
VEGFA-207ENST00000413642 UVSSAQ2YD98 709 aa28.51■■■□□ 2.15
VEGFA-207ENST00000413642 TMEM206Q9H813 350 aa28.51■■■□□ 2.15
VEGFA-207ENST00000413642 KCNK12Q9HB15 430 aa28.51■■■□□ 2.15
VEGFA-207ENST00000413642 DPP3Q9NY33 737 aa28.51■■■□□ 2.15
VEGFA-207ENST00000413642 C2CD2Q9Y426 696 aa28.51■■■□□ 2.15
VEGFA-207ENST00000413642 GTF3C5Q9Y5Q8 519 aaPredicted RBP28.51■■■□□ 2.15
VEGFA-207ENST00000413642 TECTAO75443 2155 aa28.51■■■□□ 2.15
VEGFA-207ENST00000413642 A0A1B0GVL5 298 aa28.5■■■□□ 2.15
VEGFA-207ENST00000413642 FSHRP23945 695 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms