RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 TIPINQ9BVW5 301 aa20.37■□□□□ 0.85
ITGA6-204ENST00000412899 HEBP1Q9NRV9 189 aa20.37■□□□□ 0.85
ITGA6-204ENST00000412899 ANKFY1Q9P2R3 1169 aa20.37■□□□□ 0.85
ITGA6-204ENST00000412899 KCNG1Q9UIX4 513 aa20.37■□□□□ 0.85
ITGA6-204ENST00000412899 MRPS17Q9Y2R5 130 aaKnown RBP20.37■□□□□ 0.85
ITGA6-204ENST00000412899 INSL5Q9Y5Q6 135 aa20.37■□□□□ 0.85
ITGA6-204ENST00000412899 TOM1L1O75674 476 aa20.36■□□□□ 0.85
ITGA6-204ENST00000412899 SYT1P21579 422 aa20.36■□□□□ 0.85
ITGA6-204ENST00000412899 TARSP26639 723 aaKnown RBP20.36■□□□□ 0.85
ITGA6-204ENST00000412899 SMTNP53814 917 aa20.36■□□□□ 0.85
ITGA6-204ENST00000412899 RAD51AP2Q09MP3 1159 aa20.36■□□□□ 0.85
ITGA6-204ENST00000412899 MRPL58Q14197 206 aaKnown RBP20.36■□□□□ 0.85
ITGA6-204ENST00000412899 IL17AQ16552 155 aa20.36■□□□□ 0.85
ITGA6-204ENST00000412899 SEZ6Q53EL9 994 aa20.36■□□□□ 0.85
ITGA6-204ENST00000412899 PRSS36Q5K4E3 855 aa20.36■□□□□ 0.85
ITGA6-204ENST00000412899 CYP4A22Q5TCH4 519 aa20.36■□□□□ 0.85
ITGA6-204ENST00000412899 IQCEQ6IPM2 695 aa20.36■□□□□ 0.85
ITGA6-204ENST00000412899 ZNF280DQ6N043 979 aa20.36■□□□□ 0.85
ITGA6-204ENST00000412899 ZNF852Q6ZMS4 543 aa20.36■□□□□ 0.85
ITGA6-204ENST00000412899 DCLK2Q8N568 766 aa20.36■□□□□ 0.85
ITGA6-204ENST00000412899 APPL2Q8NEU8 664 aa20.36■□□□□ 0.85
ITGA6-204ENST00000412899 RMDN1Q96DB5 314 aa20.36■□□□□ 0.85
ITGA6-204ENST00000412899 SUSD3Q96L08 255 aa20.36■□□□□ 0.85
ITGA6-204ENST00000412899 NTPCRQ9BSD7 190 aaKnown RBP20.36■□□□□ 0.85
ITGA6-204ENST00000412899 ZFP14Q9HCL3 533 aa20.36■□□□□ 0.85
ITGA6-204ENST00000412899 GUCY2CP25092 1073 aa20.35■□□□□ 0.85
ITGA6-204ENST00000412899 MARCKSP29966 332 aaPredicted RBP20.35■□□□□ 0.85
ITGA6-204ENST00000412899 MATR3P43243 847 aaKnown RBP eCLIP20.35■□□□□ 0.85
ITGA6-204ENST00000412899 ADCY1Q08828 1119 aa20.35■□□□□ 0.85
ITGA6-204ENST00000412899 GRM2Q14416 872 aa20.35■□□□□ 0.85
ITGA6-204ENST00000412899 NOLC1Q14978 699 aaKnown RBP eCLIP20.35■□□□□ 0.85
ITGA6-204ENST00000412899 SLC10A6Q3KNW5 377 aa20.35■□□□□ 0.85
ITGA6-204ENST00000412899 POTEHQ6S545 545 aa20.35■□□□□ 0.85
ITGA6-204ENST00000412899 SUMF1Q8NBK3 374 aa20.35■□□□□ 0.85
ITGA6-204ENST00000412899 SPIRE2Q8WWL2 714 aa20.35■□□□□ 0.85
ITGA6-204ENST00000412899 ATRIPQ8WXE1 791 aa20.35■□□□□ 0.85
ITGA6-204ENST00000412899 DDX12PQ92771 950 aa20.35■□□□□ 0.85
ITGA6-204ENST00000412899 TCEAL4Q96EI5 215 aa20.35■□□□□ 0.85
ITGA6-204ENST00000412899 BORCS6Q96GS4 357 aa20.35■□□□□ 0.85
ITGA6-204ENST00000412899 ZNF512Q96ME7 567 aaPredicted RBP20.35■□□□□ 0.85
ITGA6-204ENST00000412899 MMTAG2Q9BU76 263 aaKnown RBP20.35■□□□□ 0.85
ITGA6-204ENST00000412899 BRD9Q9H8M2 597 aa20.35■□□□□ 0.85
ITGA6-204ENST00000412899 SPTLC1O15269 473 aa20.34■□□□□ 0.85
ITGA6-204ENST00000412899 CLDN3O15551 220 aa20.34■□□□□ 0.85
ITGA6-204ENST00000412899 MEFVO15553 781 aaPredicted RBP20.34■□□□□ 0.85
ITGA6-204ENST00000412899 MICAL2O94851 1124 aa20.34■□□□□ 0.85
ITGA6-204ENST00000412899 PLS3P13797 630 aa20.34■□□□□ 0.85
ITGA6-204ENST00000412899 CPB1P15086 417 aa20.34■□□□□ 0.85
ITGA6-204ENST00000412899 FAM78AQ5JUQ0 283 aa20.34■□□□□ 0.85
ITGA6-204ENST00000412899 DNASE1L2Q92874 299 aa20.34■□□□□ 0.85
ITGA6-204ENST00000412899 CLDN23Q96B33 292 aa20.34■□□□□ 0.85
ITGA6-204ENST00000412899 TRMT61BQ9BVS5 477 aaKnown RBP20.34■□□□□ 0.85
ITGA6-204ENST00000412899 VPS13AQ96RL7 3174 aa20.33■□□□□ 0.85
ITGA6-204ENST00000412899 HSP90AA1P07900 732 aaKnown RBP20.33■□□□□ 0.85
ITGA6-204ENST00000412899 MYL4P12829 197 aa20.33■□□□□ 0.85
ITGA6-204ENST00000412899 FCARP24071 287 aa20.33■□□□□ 0.85
ITGA6-204ENST00000412899 CCR2P41597 374 aa20.33■□□□□ 0.85
ITGA6-204ENST00000412899 RPS9P46781 194 aaKnown RBP20.33■□□□□ 0.85
ITGA6-204ENST00000412899 ATP2C1P98194 919 aaPredicted RBP20.33■□□□□ 0.85
ITGA6-204ENST00000412899 TWF1Q12792 350 aa20.33■□□□□ 0.85
ITGA6-204ENST00000412899 ZPBP2Q6X784 338 aa20.33■□□□□ 0.85
ITGA6-204ENST00000412899 SYT2Q8N9I0 419 aaPredicted RBP20.33■□□□□ 0.85
ITGA6-204ENST00000412899 TMEM161BQ8NDZ6 487 aa20.33■□□□□ 0.85
ITGA6-204ENST00000412899 CDK5RAP3Q96JB5 506 aa20.33■□□□□ 0.85
ITGA6-204ENST00000412899 PLIN2Q99541 437 aa20.33■□□□□ 0.85
ITGA6-204ENST00000412899 NCDNQ9UBB6 729 aa20.33■□□□□ 0.85
ITGA6-204ENST00000412899 TUBGCP4Q9UGJ1 667 aa20.33■□□□□ 0.85
ITGA6-204ENST00000412899 AFF4Q9UHB7 1163 aaKnown RBP20.33■□□□□ 0.85
ITGA6-204ENST00000412899 PCDHB8Q9UN66 801 aa20.33■□□□□ 0.85
ITGA6-204ENST00000412899 PCDHGA2Q9Y5H1 932 aa20.33■□□□□ 0.85
ITGA6-204ENST00000412899 CACNA1IQ9P0X4 2223 aa20.33■□□□□ 0.84
ITGA6-204ENST00000412899 FANCMQ8IYD8 2048 aa20.32■□□□□ 0.84
ITGA6-204ENST00000412899 MAN2B1O00754 1011 aa20.32■□□□□ 0.84
ITGA6-204ENST00000412899 MAPTP10636 758 aaKnown RBP20.32■□□□□ 0.84
ITGA6-204ENST00000412899 RNF19BQ6ZMZ0 732 aa20.32■□□□□ 0.84
ITGA6-204ENST00000412899 DGLUCYQ7Z3D6 616 aa20.32■□□□□ 0.84
ITGA6-204ENST00000412899 HS6ST3Q8IZP7 471 aa20.32■□□□□ 0.84
ITGA6-204ENST00000412899 KCTD17Q8N5Z5 321 aa20.32■□□□□ 0.84
ITGA6-204ENST00000412899 IRF7Q92985 503 aa20.32■□□□□ 0.84
ITGA6-204ENST00000412899 BICD1Q96G01 975 aa20.32■□□□□ 0.84
ITGA6-204ENST00000412899 ASB16Q96NS5 453 aa20.32■□□□□ 0.84
ITGA6-204ENST00000412899 CEP72Q9P209 647 aa20.32■□□□□ 0.84
ITGA6-204ENST00000412899 MAFFQ9ULX9 164 aa20.32■□□□□ 0.84
ITGA6-204ENST00000412899 NDRG2Q9UN36 371 aaKnown RBP20.32■□□□□ 0.84
ITGA6-204ENST00000412899 CITO14578 2027 aa20.32■□□□□ 0.84
ITGA6-204ENST00000412899 SPTBN4Q9H254 2564 aa20.32■□□□□ 0.84
ITGA6-204ENST00000412899 GVINP1Q7Z2Y8 2422 aa20.31■□□□□ 0.84
ITGA6-204ENST00000412899 CXCL8P10145 99 aa20.31■□□□□ 0.84
ITGA6-204ENST00000412899 YWHAHQ04917 246 aaPredicted RBP20.31■□□□□ 0.84
ITGA6-204ENST00000412899 SPAG1Q07617 926 aa20.31■□□□□ 0.84
ITGA6-204ENST00000412899 MCL1Q07820 350 aa20.31■□□□□ 0.84
ITGA6-204ENST00000412899 PUM1Q14671 1186 aaKnown RBP eCLIP20.31■□□□□ 0.84
ITGA6-204ENST00000412899 HYIQ5T013 277 aa20.31■□□□□ 0.84
ITGA6-204ENST00000412899 TSSK4Q6SA08 328 aa20.31■□□□□ 0.84
ITGA6-204ENST00000412899 LEMD2Q8NC56 503 aa20.31■□□□□ 0.84
ITGA6-204ENST00000412899 SMARCD2Q92925 531 aa20.31■□□□□ 0.84
ITGA6-204ENST00000412899 PNMA5Q96PV4 448 aa20.31■□□□□ 0.84
ITGA6-204ENST00000412899 PLEKHA5Q9HAU0 1116 aa20.31■□□□□ 0.84
ITGA6-204ENST00000412899 ASAH2Q9NR71 780 aa20.31■□□□□ 0.84
ITGA6-204ENST00000412899 ZSCAN32Q9NX65 697 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms