RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 TGFBRAP1Q8WUH2 860 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 DCAF4Q8WV16 495 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 CTNNBL1Q8WYA6 563 aaPredicted RBP3.35□□□□□ -1.87
CUL3-204ENST00000409777 SLC5A5Q92911 643 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 COA7Q96BR5 231 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 PTCD3Q96EY7 689 aaKnown RBP3.35□□□□□ -1.87
CUL3-204ENST00000409777 ZNF333Q96JL9 665 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 PCDHB18PQ96TA0 734 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 MYLK2Q9H1R3 596 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 KANSL2Q9H9L4 492 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 ARHGEF10LQ9HCE6 1279 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 AVENQ9NQS1 362 aaPredicted RBP3.35□□□□□ -1.87
CUL3-204ENST00000409777 FGFR1OP2Q9NVK5 253 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 NINJ2Q9NZG7 142 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 MAP10Q9P2G4 905 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 KANSL3Q9P2N6 904 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 UVRAGQ9P2Y5 699 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 EGFL7Q9UHF1 273 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 G3BP2Q9UN86 482 aaKnown RBP3.35□□□□□ -1.87
CUL3-204ENST00000409777 CHKBQ9Y259 395 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 SNX24Q9Y343 169 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 RTCBQ9Y3I0 505 aaKnown RBP3.35□□□□□ -1.87
CUL3-204ENST00000409777 PASKQ96RG2 1323 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 KLRG2A4D1S0 409 aaPredicted RBP3.35□□□□□ -1.87
CUL3-204ENST00000409777 C2CD2LO14523 706 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 EDF1O60869 148 aaKnown RBP3.35□□□□□ -1.87
CUL3-204ENST00000409777 DIAPH2O60879 1101 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 PSMD10O75832 226 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 CNGA1P29973 690 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 GBP2P32456 591 aaPredicted RBP3.35□□□□□ -1.87
CUL3-204ENST00000409777 CHKAP35790 457 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 BTDP43251 543 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 GPC5P78333 572 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 GHRHRQ02643 423 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 GRAPQ13588 217 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 STAT4Q14765 748 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 PDK4Q16654 411 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 UBE2SQ16763 222 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 PUS10Q3MIT2 529 aaKnown RBP3.35□□□□□ -1.87
CUL3-204ENST00000409777 ODF2Q5BJF6 829 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 SLC45A4Q5BKX6 768 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 RINT1Q6NUQ1 792 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 PPP1R21Q6ZMI0 780 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 ZNF720Q7Z2F6 126 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 TRABD2AQ86V40 505 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 DNAAF5Q86Y56 855 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 CYP4X1Q8N118 509 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 UBL4BQ8N7F7 174 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 GMCL1P1Q8NEA9 526 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 GRAPLQ8TC17 118 aaPredicted RBP3.35□□□□□ -1.87
CUL3-204ENST00000409777 SHC3Q92529 594 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 PRCCQ92733 491 aaPredicted RBP3.35□□□□□ -1.87
CUL3-204ENST00000409777 SNF8Q96H20 258 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 TRAPPC9Q96Q05 1148 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 DDX23Q9BUQ8 820 aaKnown RBP3.35□□□□□ -1.87
CUL3-204ENST00000409777 TIPINQ9BVW5 301 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 ANO3Q9BYT9 981 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 MMADHCQ9H3L0 296 aaPredicted RBP3.35□□□□□ -1.87
CUL3-204ENST00000409777 AGPAT3Q9NRZ7 376 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.35□□□□□ -1.87
CUL3-204ENST00000409777 BTG4Q9NY30 223 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 TFCP2L1Q9NZI6 479 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 KLHL14Q9P2G3 628 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 BAIAP2L1Q9UHR4 511 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 GTF3C4Q9UKN8 822 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 GRID1Q9ULK0 1009 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 PCDHB3Q9Y5E6 796 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 CSDE1O75534 798 aaKnown RBP3.35□□□□□ -1.87
CUL3-204ENST00000409777 NEBLO76041 1014 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 SNUPNO95149 360 aaKnown RBP3.35□□□□□ -1.87
CUL3-204ENST00000409777 FOSP01100 380 aaPredicted RBP3.35□□□□□ -1.87
CUL3-204ENST00000409777 LMNAP02545 664 aaKnown RBP3.35□□□□□ -1.87
CUL3-204ENST00000409777 CLTAP09496 248 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 CCNYL3P0C7X3 344 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 DHRS4L1P0CG22 281 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 CREB1P16220 341 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 COMTP21964 271 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 FGFR4P22455 802 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 COPB2P35606 906 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 CLCN2P51788 898 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 RWDD2BP57060 319 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 FMO1Q01740 532 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 ROR2Q01974 943 aaKnown RBP3.35□□□□□ -1.87
CUL3-204ENST00000409777 ARID5AQ03989 594 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 STRN3Q13033 797 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 ALCAMQ13740 583 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 KRT72Q14CN4 511 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 DLGAP5Q15398 846 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 FAM133BQ5BKY9 247 aaKnown RBP3.35□□□□□ -1.87
CUL3-204ENST00000409777 SYDE2Q5VT97 1194 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 FOXB2Q5VYV0 432 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 IRGCQ6NXR0 463 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 AADACL2Q6P093 401 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 RNF135Q8IUD6 432 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 SIAH1Q8IUQ4 282 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 FAM186BQ8IYM0 893 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 ZCCHC9Q8N567 271 aaKnown RBP3.35□□□□□ -1.87
CUL3-204ENST00000409777 ATL2Q8NHH9 583 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 ERMNQ8TAM6 284 aa3.35□□□□□ -1.87
CUL3-204ENST00000409777 PIGOQ8TEQ8 1089 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms