RNA–Protein interactions for RNA: ENST00000405262.6

TNFSF11-204, Transcript of TNF superfamily member 11, humanhuman

TSL 5 BASIC

Gene TNFSF11, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-204ENST00000405262 TTLL11Q8NHH1 800 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 LARP4BQ92615 738 aaKnown RBP10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 NMD3Q96D46 503 aaKnown RBP10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 ITPKCQ96DU7 683 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 OSBPL8Q9BZF1 889 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 PPCSQ9HAB8 311 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 SSU72Q9NP77 194 aaKnown RBP10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 BLOC1S4Q9NUP1 217 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 UTP6Q9NYH9 597 aaKnown RBP10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 PCDHA6Q9UN73 950 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 DMTF1Q9Y222 760 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 R3HDM2Q9Y2K5 976 aaKnown RBP10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 PCDHA8Q9Y5H6 950 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 WASF2Q9Y6W5 498 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 TMEM110-MUSTN1A8MSY1 372 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 RASA4BC9J798 803 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 VILLO15195 856 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 RASA4O43374 803 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 RARBP10826 455 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 MAN1A1P33908 653 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 GRIA2P42262 883 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 CHN2P52757 468 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 KCNH2Q12809 1159 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 TRIM28Q13263 835 aaKnown RBP10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 CLPPQ16740 277 aaPredicted RBP10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 Q6ZNX1 250 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 FRMD5Q7Z6J6 570 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 TMEM110Q86TL2 294 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 CCDC105Q8IYK2 499 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 RTKN2Q8IZC4 609 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 SCYL3Q8IZE3 742 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 SYNE4Q8N205 404 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 LCORLQ8N3X6 602 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 VGLL2Q8N8G2 317 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 U2AF1L4Q8WU68 220 aaKnown RBP10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 MAML1Q92585 1016 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 RPGRQ92834 1020 aaKnown RBP10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 BTBD9Q96Q07 612 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 FOXP3Q9BZS1 431 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 INIPQ9NRY2 104 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 CLIC5Q9NZA1 410 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 TMOD4Q9NZQ9 345 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 SAP30BPQ9UHR5 308 aaKnown RBP10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 ZNHIT2Q9UHR6 403 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 TELO2Q9Y4R8 837 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 COL4A5P29400 1685 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 LAMB2P55268 1798 aa10.34□□□□□ -0.75
TNFSF11-204ENST00000405262 ZNF541Q9H0D2 1346 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 HTR3EA5X5Y0 456 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 TRIM43BA6NCK2 446 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 THAP12O43422 761 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 BUD23O43709 281 aaKnown RBP10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 PRKAB2O43741 272 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 CSDE1O75534 798 aaKnown RBP10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 COPB2P35606 906 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 PGM1P36871 562 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 ACTR3P61158 418 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 PPP2R5CQ13362 524 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 OTOAQ7RTW8 1153 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 TRABD2AQ86V40 505 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 SATL1Q86VE3 508 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 NLRP10Q86W26 655 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 SFR1Q86XK3 245 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 CYP4X1Q8N118 509 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 SYT2Q8N9I0 419 aaPredicted RBP10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 CCDC110Q8TBZ0 833 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 ALG3Q92685 438 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 KCNN1Q92952 543 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 VPS50Q96JG6 964 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 HNRNPABQ99729 332 aaKnown RBP10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 ISCA1Q9BUE6 129 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 TSPYL2Q9H2G4 693 aaPredicted RBP10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 LRRC19Q9H756 370 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 USP29Q9HBJ7 922 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 ARL8BQ9NVJ2 186 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 TAS2R1Q9NYW7 299 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 MTO1Q9Y2Z2 717 aaKnown RBP10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 NUB1Q9Y5A7 615 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 ESRRAP11474 423 aaPredicted RBP10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 CETN2P41208 172 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 NT5C2P49902 561 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 GEMIN4P57678 1058 aaKnown RBP10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 IRX4P78413 519 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 GRB10Q13322 594 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 RASA2Q15283 850 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 EXOC3L4Q17RC7 722 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 INF2Q27J81 1249 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 TMEM266Q2M3C6 531 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 TMEM63BQ5T3F8 832 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 TCERG1LQ5VWI1 586 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 KRT25Q7Z3Z0 450 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 ADAT2Q7Z6V5 191 aaKnown RBP10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 RASSF3Q86WH2 238 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 LRRC6Q86X45 466 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 TMPRSS6Q8IU80 811 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 RAD54LQ92698 747 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 SNF8Q96H20 258 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 ZSWIM1Q9BR11 485 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 TCHPQ9BT92 498 aa10.33□□□□□ -0.76
TNFSF11-204ENST00000405262 EIF2AQ9BY44 585 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms