RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 YAF2Q8IY57 180 aa10.28□□□□□ -0.76
NUP43-204ENST00000403890 ZNF461Q8TAF7 563 aa10.28□□□□□ -0.76
NUP43-204ENST00000403890 ZSCAN18Q8TBC5 510 aaPredicted RBP10.28□□□□□ -0.76
NUP43-204ENST00000403890 CCDC12Q8WUD4 166 aaPredicted RBP10.28□□□□□ -0.76
NUP43-204ENST00000403890 E2F7Q96AV8 911 aa10.28□□□□□ -0.76
NUP43-204ENST00000403890 CEP170P1Q96L14 293 aa10.28□□□□□ -0.76
NUP43-204ENST00000403890 GPSM3Q9Y4H4 160 aa10.28□□□□□ -0.76
NUP43-204ENST00000403890 PPME1Q9Y570 386 aa10.28□□□□□ -0.76
NUP43-204ENST00000403890 BACE2Q9Y5Z0 518 aa10.28□□□□□ -0.76
NUP43-204ENST00000403890 SMG1Q96Q15 3661 aaKnown RBP10.28□□□□□ -0.76
NUP43-204ENST00000403890 PCNX2A6NKB5 2137 aa10.28□□□□□ -0.76
NUP43-204ENST00000403890 CACNA1EQ15878 2313 aa10.28□□□□□ -0.76
NUP43-204ENST00000403890 TICRRQ7Z2Z1 1910 aa10.27□□□□□ -0.76
NUP43-204ENST00000403890 LNP1A1A4G5 178 aa10.27□□□□□ -0.77
NUP43-204ENST00000403890 BCLAF3A2AJT9 711 aaKnown RBP10.27□□□□□ -0.77
NUP43-204ENST00000403890 SPECC1L-ADORA2AF8WAN1 911 aa10.27□□□□□ -0.77
NUP43-204ENST00000403890 SGSM2O43147 1006 aa10.27□□□□□ -0.77
NUP43-204ENST00000403890 ZBTB43O43298 467 aa10.27□□□□□ -0.77
NUP43-204ENST00000403890 DKC1O60832 514 aaKnown RBP eCLIP10.27□□□□□ -0.77
NUP43-204ENST00000403890 RHOBTB1O94844 696 aa10.27□□□□□ -0.77
NUP43-204ENST00000403890 NPTXRO95502 500 aa10.27□□□□□ -0.77
NUP43-204ENST00000403890 THP07101 528 aa10.27□□□□□ -0.77
NUP43-204ENST00000403890 CTHP32929 405 aa10.27□□□□□ -0.77
NUP43-204ENST00000403890 QARSP47897 775 aaKnown RBP10.27□□□□□ -0.77
NUP43-204ENST00000403890 CREB5Q02930 508 aa10.27□□□□□ -0.77
NUP43-204ENST00000403890 CCINQ13939 588 aa10.27□□□□□ -0.77
NUP43-204ENST00000403890 MXD4Q14582 209 aaPredicted RBP10.27□□□□□ -0.77
NUP43-204ENST00000403890 PON2Q15165 354 aa10.27□□□□□ -0.77
NUP43-204ENST00000403890 KIAA1211LQ6NV74 962 aa10.27□□□□□ -0.77
NUP43-204ENST00000403890 SLC27A1Q6PCB7 646 aa10.27□□□□□ -0.77
NUP43-204ENST00000403890 TXNDC11Q6PKC3 985 aa10.27□□□□□ -0.77
NUP43-204ENST00000403890 C19orf48Q6RUI8 117 aa10.27□□□□□ -0.77
NUP43-204ENST00000403890 ANKS3Q6ZW76 656 aa10.27□□□□□ -0.77
NUP43-204ENST00000403890 BICD2Q8TD16 824 aa10.27□□□□□ -0.77
NUP43-204ENST00000403890 DUSP15Q9H1R2 295 aaPredicted RBP10.27□□□□□ -0.77
NUP43-204ENST00000403890 RWDD1Q9H446 243 aaPredicted RBP10.27□□□□□ -0.77
NUP43-204ENST00000403890 TMEM9BQ9NQ34 198 aa10.27□□□□□ -0.77
NUP43-204ENST00000403890 SLC8A2Q9UPR5 921 aa10.27□□□□□ -0.77
NUP43-204ENST00000403890 WDFY3Q8IZQ1 3526 aa10.27□□□□□ -0.77
NUP43-204ENST00000403890 ACACAQ13085 2346 aa10.26□□□□□ -0.77
NUP43-204ENST00000403890 A0A1B0GUA9 196 aa10.26□□□□□ -0.77
NUP43-204ENST00000403890 EIF4E1BA6NMX2 242 aaKnown RBP10.26□□□□□ -0.77
NUP43-204ENST00000403890 KHNYNO15037 678 aaKnown RBP10.26□□□□□ -0.77
NUP43-204ENST00000403890 ABLIM3O94929 683 aa10.26□□□□□ -0.77
NUP43-204ENST00000403890 POU5F1BQ06416 359 aa10.26□□□□□ -0.77
NUP43-204ENST00000403890 TFDP1Q14186 410 aa10.26□□□□□ -0.77
NUP43-204ENST00000403890 EMC2Q15006 297 aa10.26□□□□□ -0.77
NUP43-204ENST00000403890 AMHR2Q16671 573 aa10.26□□□□□ -0.77
NUP43-204ENST00000403890 IQCEQ6IPM2 695 aa10.26□□□□□ -0.77
NUP43-204ENST00000403890 CDR2LQ86X02 465 aaPredicted RBP10.26□□□□□ -0.77
NUP43-204ENST00000403890 PROSER1Q86XN7 944 aa10.26□□□□□ -0.77
NUP43-204ENST00000403890 TCEAL8Q8IYN2 117 aa10.26□□□□□ -0.77
NUP43-204ENST00000403890 ELMOD1Q8N336 334 aa10.26□□□□□ -0.77
NUP43-204ENST00000403890 DEFB124Q8NES8 71 aa10.26□□□□□ -0.77
NUP43-204ENST00000403890 ZNF512Q96ME7 567 aaPredicted RBP10.26□□□□□ -0.77
NUP43-204ENST00000403890 GPR88Q9GZN0 384 aa10.26□□□□□ -0.77
NUP43-204ENST00000403890 CYP4F11Q9HBI6 524 aa10.26□□□□□ -0.77
NUP43-204ENST00000403890 KLK13Q9UKR3 277 aa10.26□□□□□ -0.77
NUP43-204ENST00000403890 ADAMTS20P59510 1910 aa10.26□□□□□ -0.77
NUP43-204ENST00000403890 COL4A2P08572 1712 aa10.26□□□□□ -0.77
NUP43-204ENST00000403890 ASCC3Q8N3C0 2202 aaKnown RBP10.25□□□□□ -0.77
NUP43-204ENST00000403890 LOC400499M0QZD8 3231 aa10.25□□□□□ -0.77
NUP43-204ENST00000403890 BPTFQ12830 3046 aa10.25□□□□□ -0.77
NUP43-204ENST00000403890 CDX4O14627 284 aaPredicted RBP10.25□□□□□ -0.77
NUP43-204ENST00000403890 PTGESO14684 152 aa10.25□□□□□ -0.77
NUP43-204ENST00000403890 B4GALT5O43286 388 aa10.25□□□□□ -0.77
NUP43-204ENST00000403890 TRAPPC3O43617 180 aa10.25□□□□□ -0.77
NUP43-204ENST00000403890 ATG13O75143 517 aa10.25□□□□□ -0.77
NUP43-204ENST00000403890 MOSPD3O75425 235 aa10.25□□□□□ -0.77
NUP43-204ENST00000403890 B3GAT3O94766 335 aa10.25□□□□□ -0.77
NUP43-204ENST00000403890 MYL4P12829 197 aa10.25□□□□□ -0.77
NUP43-204ENST00000403890 ATF2P15336 505 aa10.25□□□□□ -0.77
NUP43-204ENST00000403890 GJA1P17302 382 aa10.25□□□□□ -0.77
NUP43-204ENST00000403890 CDC27P30260 824 aa10.25□□□□□ -0.77
NUP43-204ENST00000403890 FGD1P98174 961 aa10.25□□□□□ -0.77
NUP43-204ENST00000403890 ROR1Q01973 937 aa10.25□□□□□ -0.77
NUP43-204ENST00000403890 MBTD1Q05BQ5 628 aa10.25□□□□□ -0.77
NUP43-204ENST00000403890 FCHO2Q0JRZ9 810 aa10.25□□□□□ -0.77
NUP43-204ENST00000403890 Q4G0T1 1027 aa10.25□□□□□ -0.77
NUP43-204ENST00000403890 SLC8B1Q6J4K2 584 aa10.25□□□□□ -0.77
NUP43-204ENST00000403890 OTUD6AQ7L8S5 288 aa10.25□□□□□ -0.77
NUP43-204ENST00000403890 CAMKK1Q8N5S9 505 aa10.25□□□□□ -0.77
NUP43-204ENST00000403890 LEMD2Q8NC56 503 aa10.25□□□□□ -0.77
NUP43-204ENST00000403890 TTC8Q8TAM2 541 aa10.25□□□□□ -0.77
NUP43-204ENST00000403890 ZNF516Q92618 1163 aa10.25□□□□□ -0.77
NUP43-204ENST00000403890 SLC32A1Q9H598 525 aa10.25□□□□□ -0.77
NUP43-204ENST00000403890 SLITRK6Q9H5Y7 841 aa10.25□□□□□ -0.77
NUP43-204ENST00000403890 GTSE1Q9NYZ3 720 aa10.25□□□□□ -0.77
NUP43-204ENST00000403890 BRPF3Q9ULD4 1205 aa10.25□□□□□ -0.77
NUP43-204ENST00000403890 NCANO14594 1321 aa10.25□□□□□ -0.77
NUP43-204ENST00000403890 LAMA5O15230 3695 aa10.25□□□□□ -0.77
NUP43-204ENST00000403890 FAM221BA6H8Z2 402 aa10.24□□□□□ -0.77
NUP43-204ENST00000403890 GOLGA8AA7E2F4 631 aa10.24□□□□□ -0.77
NUP43-204ENST00000403890 GOLGA8BA8MQT2 603 aa10.24□□□□□ -0.77
NUP43-204ENST00000403890 TMEM189-UBE2V1I3L0A0 370 aa10.24□□□□□ -0.77
NUP43-204ENST00000403890 EML1O00423 815 aa10.24□□□□□ -0.77
NUP43-204ENST00000403890 SEC24AO95486 1093 aa10.24□□□□□ -0.77
NUP43-204ENST00000403890 CAPNS1P04632 268 aa10.24□□□□□ -0.77
NUP43-204ENST00000403890 P4HBP07237 508 aaKnown RBP10.24□□□□□ -0.77
NUP43-204ENST00000403890 GSPT1P15170 499 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms