RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 CTNNBL1Q8WYA6 563 aaPredicted RBP27.47■■□□□ 1.99
CPNE1-205ENST00000401607 ARHGEF26Q96DR7 871 aa27.47■■□□□ 1.99
CPNE1-205ENST00000401607 THAP2Q9H0W7 228 aa27.47■■□□□ 1.99
CPNE1-205ENST00000401607 CITO14578 2027 aa27.46■■□□□ 1.99
CPNE1-205ENST00000401607 SRGAP2O75044 1071 aa27.46■■□□□ 1.99
CPNE1-205ENST00000401607 FTLP02792 175 aaPredicted RBP27.46■■□□□ 1.99
CPNE1-205ENST00000401607 KRT19P08727 400 aa27.46■■□□□ 1.99
CPNE1-205ENST00000401607 BPIFB4P59827 614 aa27.46■■□□□ 1.99
CPNE1-205ENST00000401607 SERINC5Q86VE9 423 aa27.46■■□□□ 1.99
CPNE1-205ENST00000401607 RBBP8NLQ8NC74 664 aaPredicted RBP27.46■■□□□ 1.99
CPNE1-205ENST00000401607 TAF4BQ92750 862 aa27.46■■□□□ 1.99
CPNE1-205ENST00000401607 CXCL16Q9H2A7 254 aa27.46■■□□□ 1.99
CPNE1-205ENST00000401607 ITGB3P05106 788 aa27.45■■□□□ 1.99
CPNE1-205ENST00000401607 ASPAP45381 313 aa27.45■■□□□ 1.99
CPNE1-205ENST00000401607 NOP2P46087 812 aaKnown RBP27.45■■□□□ 1.99
CPNE1-205ENST00000401607 ZNF132P52740 706 aa27.45■■□□□ 1.99
CPNE1-205ENST00000401607 UBXN11Q5T124 520 aa27.45■■□□□ 1.99
CPNE1-205ENST00000401607 FAM228AQ86W67 206 aa27.45■■□□□ 1.99
CPNE1-205ENST00000401607 ZNF677Q86XU0 584 aa27.45■■□□□ 1.99
CPNE1-205ENST00000401607 NT5DC4Q86YG4 428 aa27.45■■□□□ 1.99
CPNE1-205ENST00000401607 CD302Q8IX05 232 aa27.45■■□□□ 1.99
CPNE1-205ENST00000401607 TPCN2Q8NHX9 752 aa27.45■■□□□ 1.99
CPNE1-205ENST00000401607 RFFLQ8WZ73 363 aa27.45■■□□□ 1.99
CPNE1-205ENST00000401607 SNX27Q96L92 541 aa27.45■■□□□ 1.99
CPNE1-205ENST00000401607 TLR10Q9BXR5 811 aa27.45■■□□□ 1.99
CPNE1-205ENST00000401607 SNX12Q9UMY4 172 aa27.45■■□□□ 1.99
CPNE1-205ENST00000401607 HES2Q9Y543 173 aa27.45■■□□□ 1.99
CPNE1-205ENST00000401607 CDY2AQ9Y6F7 541 aa27.45■■□□□ 1.99
CPNE1-205ENST00000401607 NCK2O43639 380 aa27.45■■□□□ 1.98
CPNE1-205ENST00000401607 IFI16Q16666 785 aaKnown RBP27.45■■□□□ 1.98
CPNE1-205ENST00000401607 LRRC57Q8N9N7 239 aa27.45■■□□□ 1.98
CPNE1-205ENST00000401607 PCSK9Q8NBP7 692 aaKnown RBP27.45■■□□□ 1.98
CPNE1-205ENST00000401607 NXF3Q9H4D5 531 aaKnown RBP27.45■■□□□ 1.98
CPNE1-205ENST00000401607 PLEKHA5Q9HAU0 1116 aa27.45■■□□□ 1.98
CPNE1-205ENST00000401607 NOC2LQ9Y3T9 749 aaKnown RBP27.45■■□□□ 1.98
CPNE1-205ENST00000401607 TRPV2Q9Y5S1 764 aa27.45■■□□□ 1.98
CPNE1-205ENST00000401607 FKTNO75072 461 aa27.44■■□□□ 1.98
CPNE1-205ENST00000401607 GUCY2FP51841 1108 aa27.44■■□□□ 1.98
CPNE1-205ENST00000401607 ZNF296Q8WUU4 475 aaPredicted RBP27.44■■□□□ 1.98
CPNE1-205ENST00000401607 OSGEPQ9NPF4 335 aa27.44■■□□□ 1.98
CPNE1-205ENST00000401607 POLIQ9UNA4 740 aa27.44■■□□□ 1.98
CPNE1-205ENST00000401607 FTCDO95954 541 aa27.43■■□□□ 1.98
CPNE1-205ENST00000401607 CLEC16AQ2KHT3 1053 aa27.43■■□□□ 1.98
CPNE1-205ENST00000401607 CEP112Q8N8E3 955 aa27.43■■□□□ 1.98
CPNE1-205ENST00000401607 SLC35G2Q8TBE7 412 aa27.43■■□□□ 1.98
CPNE1-205ENST00000401607 KIF12Q96FN5 646 aa27.43■■□□□ 1.98
CPNE1-205ENST00000401607 CISHQ9NSE2 258 aa27.43■■□□□ 1.98
CPNE1-205ENST00000401607 CENPFP49454 3210 aa27.43■■□□□ 1.98
CPNE1-205ENST00000401607 EFCAB8A8MWE9 144 aa27.43■■□□□ 1.98
CPNE1-205ENST00000401607 PRLRP16471 622 aa27.43■■□□□ 1.98
CPNE1-205ENST00000401607 MEI1Q5TIA1 1274 aa27.43■■□□□ 1.98
CPNE1-205ENST00000401607 SCARA5Q6ZMJ2 495 aa27.43■■□□□ 1.98
CPNE1-205ENST00000401607 RPAINQ86UA6 219 aa27.43■■□□□ 1.98
CPNE1-205ENST00000401607 RSPH3Q86UC2 560 aa27.43■■□□□ 1.98
CPNE1-205ENST00000401607 ZMAT2Q96NC0 199 aaKnown RBP27.43■■□□□ 1.98
CPNE1-205ENST00000401607 TRIM6Q9C030 488 aaPredicted RBP27.43■■□□□ 1.98
CPNE1-205ENST00000401607 PUF60Q9UHX1 559 aaKnown RBP27.43■■□□□ 1.98
CPNE1-205ENST00000401607 M0QZ92 97 aa27.42■■□□□ 1.98
CPNE1-205ENST00000401607 INHAP05111 366 aa27.42■■□□□ 1.98
CPNE1-205ENST00000401607 CD58P19256 250 aa27.42■■□□□ 1.98
CPNE1-205ENST00000401607 GNA15P30679 374 aa27.42■■□□□ 1.98
CPNE1-205ENST00000401607 POLR2BP30876 1174 aaKnown RBP27.42■■□□□ 1.98
CPNE1-205ENST00000401607 ERCC6LQ2NKX8 1250 aa27.42■■□□□ 1.98
CPNE1-205ENST00000401607 ZNF667Q5HYK9 610 aa27.42■■□□□ 1.98
CPNE1-205ENST00000401607 RNF180Q86T96 592 aa27.42■■□□□ 1.98
CPNE1-205ENST00000401607 VRTNQ9H8Y1 702 aa27.42■■□□□ 1.98
CPNE1-205ENST00000401607 DPP3Q9NY33 737 aa27.42■■□□□ 1.98
CPNE1-205ENST00000401607 NXF1Q9UBU9 619 aaKnown RBP27.42■■□□□ 1.98
CPNE1-205ENST00000401607 ITGA11Q9UKX5 1188 aa27.42■■□□□ 1.98
CPNE1-205ENST00000401607 DERAQ9Y315 318 aa27.42■■□□□ 1.98
CPNE1-205ENST00000401607 HYOU1Q9Y4L1 999 aa27.42■■□□□ 1.98
CPNE1-205ENST00000401607 ZNF185O15231 689 aa27.41■■□□□ 1.98
CPNE1-205ENST00000401607 RECQL4O94761 1208 aa27.41■■□□□ 1.98
CPNE1-205ENST00000401607 WEE2P0C1S8 567 aa27.41■■□□□ 1.98
CPNE1-205ENST00000401607 UNGP13051 313 aaPredicted RBP27.41■■□□□ 1.98
CPNE1-205ENST00000401607 ATICP31939 592 aa27.41■■□□□ 1.98
CPNE1-205ENST00000401607 MGAT3Q09327 533 aa27.41■■□□□ 1.98
CPNE1-205ENST00000401607 ACAD10Q6JQN1 1059 aa27.41■■□□□ 1.98
CPNE1-205ENST00000401607 ALKAL1Q6UXT8 129 aa27.41■■□□□ 1.98
CPNE1-205ENST00000401607 BCO2Q9BYV7 579 aa27.41■■□□□ 1.98
CPNE1-205ENST00000401607 SENP6Q9GZR1 1112 aaPredicted RBP27.41■■□□□ 1.98
CPNE1-205ENST00000401607 GOLPH3Q9H4A6 298 aa27.41■■□□□ 1.98
CPNE1-205ENST00000401607 COG5Q9UP83 839 aa27.41■■□□□ 1.98
CPNE1-205ENST00000401607 CHRNA1P02708 482 aa27.4■■□□□ 1.98
CPNE1-205ENST00000401607 CTSHP09668 335 aa27.4■■□□□ 1.98
CPNE1-205ENST00000401607 YARSP54577 528 aaKnown RBP27.4■■□□□ 1.98
CPNE1-205ENST00000401607 GPC5P78333 572 aa27.4■■□□□ 1.98
CPNE1-205ENST00000401607 TCEAL1Q15170 157 aa27.4■■□□□ 1.98
CPNE1-205ENST00000401607 SMYD5Q6GMV2 418 aa27.4■■□□□ 1.98
CPNE1-205ENST00000401607 RSRC2Q7L4I2 434 aaKnown RBP27.4■■□□□ 1.98
CPNE1-205ENST00000401607 SLFN11Q7Z7L1 901 aa27.4■■□□□ 1.98
CPNE1-205ENST00000401607 FAXDC2Q96IV6 333 aa27.4■■□□□ 1.98
CPNE1-205ENST00000401607 OSBPL9Q96SU4 736 aa27.4■■□□□ 1.98
CPNE1-205ENST00000401607 SAGE1Q9NXZ1 904 aa27.4■■□□□ 1.98
CPNE1-205ENST00000401607 CNTN3Q9P232 1028 aa27.4■■□□□ 1.98
CPNE1-205ENST00000401607 TSKSQ9UJT2 592 aa27.4■■□□□ 1.98
CPNE1-205ENST00000401607 AGAP1Q9UPQ3 857 aa27.4■■□□□ 1.98
CPNE1-205ENST00000401607 CYP1A1P04798 512 aaPredicted RBP27.4■■□□□ 1.98
CPNE1-205ENST00000401607 CFHP08603 1231 aa27.4■■□□□ 1.98
CPNE1-205ENST00000401607 ACLYP53396 1101 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms