RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 KCNH3Q9ULD8 1083 aa9.14□□□□□ -0.95
USP16-202ENST00000399973 POLIQ9UNA4 740 aa9.14□□□□□ -0.95
USP16-202ENST00000399973 CLUHO75153 1309 aa9.13□□□□□ -0.95
USP16-202ENST00000399973 C2CD4DB7Z1M9 353 aa9.13□□□□□ -0.95
USP16-202ENST00000399973 PPEF2O14830 753 aa9.13□□□□□ -0.95
USP16-202ENST00000399973 C8AP07357 584 aa9.13□□□□□ -0.95
USP16-202ENST00000399973 ALADP13716 330 aa9.13□□□□□ -0.95
USP16-202ENST00000399973 CPB1P15086 417 aa9.13□□□□□ -0.95
USP16-202ENST00000399973 CUL4BQ13620 913 aa9.13□□□□□ -0.95
USP16-202ENST00000399973 POSTNQ15063 836 aa9.13□□□□□ -0.95
USP16-202ENST00000399973 CTXN3Q4LDR2 81 aa9.13□□□□□ -0.95
USP16-202ENST00000399973 TMEM31Q5JXX7 168 aa9.13□□□□□ -0.95
USP16-202ENST00000399973 PPM1LQ5SGD2 360 aa9.13□□□□□ -0.95
USP16-202ENST00000399973 ZNF280DQ6N043 979 aa9.13□□□□□ -0.95
USP16-202ENST00000399973 CD300LGQ6UXG3 332 aa9.13□□□□□ -0.95
USP16-202ENST00000399973 DSTYKQ6XUX3 929 aa9.13□□□□□ -0.95
USP16-202ENST00000399973 GET4Q7L5D6 327 aaPredicted RBP9.13□□□□□ -0.95
USP16-202ENST00000399973 NELFCDQ8IXH7 590 aa9.13□□□□□ -0.95
USP16-202ENST00000399973 GPR65Q8IYL9 337 aa9.13□□□□□ -0.95
USP16-202ENST00000399973 SLC7A14Q8TBB6 771 aa9.13□□□□□ -0.95
USP16-202ENST00000399973 CLSTN3Q9BQT9 956 aa9.13□□□□□ -0.95
USP16-202ENST00000399973 CBWD1Q9BRT8 395 aa9.13□□□□□ -0.95
USP16-202ENST00000399973 PLEKHA4Q9H4M7 779 aa9.13□□□□□ -0.95
USP16-202ENST00000399973 PCIF1Q9H4Z3 704 aa9.13□□□□□ -0.95
USP16-202ENST00000399973 TMEM206Q9H813 350 aa9.13□□□□□ -0.95
USP16-202ENST00000399973 RBAKQ9NYW8 714 aaPredicted RBP9.13□□□□□ -0.95
USP16-202ENST00000399973 FBXW11Q9UKB1 542 aa9.13□□□□□ -0.95
USP16-202ENST00000399973 DOCK6Q96HP0 2047 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 MUC3AQ02505 3323 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 PI4K2BG5E9Z4 385 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 H7C4K7 107 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 PRRG1O14668 218 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 SYN3O14994 580 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 CCL16O15467 120 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 ACTN4O43707 911 aaKnown RBP9.12□□□□□ -0.95
USP16-202ENST00000399973 ZMYND10O75800 440 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 IL18RAPO95256 599 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 CYP3A5P20815 502 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 ADSSP30520 456 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 LRPAP1P30533 357 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 GBP2P32456 591 aaPredicted RBP9.12□□□□□ -0.95
USP16-202ENST00000399973 TFAMQ00059 246 aaKnown RBP9.12□□□□□ -0.95
USP16-202ENST00000399973 ROR1Q01973 937 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 SPATA1Q5VX52 437 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 RSPO2Q6UXX9 243 aaPredicted RBP9.12□□□□□ -0.95
USP16-202ENST00000399973 C15orf39Q6ZRI6 1047 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 UNC13DQ70J99 1090 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 USP37Q86T82 979 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 BRSK2Q8IWQ3 736 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 CD302Q8IX05 232 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 EFCAB13Q8IY85 973 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 FSIP1Q8NA03 581 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 ZSWIM2Q8NEG5 633 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 APPL2Q8NEU8 664 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 CMASQ8NFW8 434 aaPredicted RBP9.12□□□□□ -0.95
USP16-202ENST00000399973 ACSF2Q96CM8 615 aaPredicted RBP9.12□□□□□ -0.95
USP16-202ENST00000399973 FAM84AQ96KN4 292 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 SUSD3Q96L08 255 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 C7orf25Q9BPX7 421 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 STRA6Q9BX79 667 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 SCAND2PQ9GZW5 306 aaPredicted RBP9.12□□□□□ -0.95
USP16-202ENST00000399973 ASB7Q9H672 318 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 SLC39A2Q9NP94 309 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 EXOC1Q9NV70 894 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 ZDHHC7Q9NXF8 308 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 PCDHB8Q9UN66 801 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 TIMM13Q9Y5L4 95 aaPredicted RBP9.12□□□□□ -0.95
USP16-202ENST00000399973 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.12□□□□□ -0.95
USP16-202ENST00000399973 STYXL1Q9Y6J8 313 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 KMT2EQ8IZD2 1858 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 DOCK8Q8NF50 2099 aa9.12□□□□□ -0.95
USP16-202ENST00000399973 UBE4BO95155 1302 aa9.11□□□□□ -0.95
USP16-202ENST00000399973 EIF3DO15371 548 aaKnown RBP eCLIP9.11□□□□□ -0.95
USP16-202ENST00000399973 EXTL3O43909 919 aa9.11□□□□□ -0.95
USP16-202ENST00000399973 XYLBO75191 536 aa9.11□□□□□ -0.95
USP16-202ENST00000399973 CLSTN1O94985 981 aa9.11□□□□□ -0.95
USP16-202ENST00000399973 LDHAP00338 332 aaKnown RBP9.11□□□□□ -0.95
USP16-202ENST00000399973 ASGR2P07307 311 aa9.11□□□□□ -0.95
USP16-202ENST00000399973 TMEM191BP0C7N4 346 aa9.11□□□□□ -0.95
USP16-202ENST00000399973 SLFN14P0C7P3 912 aa9.11□□□□□ -0.95
USP16-202ENST00000399973 ODC1P11926 461 aa9.11□□□□□ -0.95
USP16-202ENST00000399973 GARTP22102 1010 aa9.11□□□□□ -0.95
USP16-202ENST00000399973 ELF1P32519 619 aa9.11□□□□□ -0.95
USP16-202ENST00000399973 SYKP43405 635 aa9.11□□□□□ -0.95
USP16-202ENST00000399973 CYP2J2P51589 502 aa9.11□□□□□ -0.95
USP16-202ENST00000399973 NDUFA8P51970 172 aa9.11□□□□□ -0.95
USP16-202ENST00000399973 WNT7BP56706 349 aa9.11□□□□□ -0.95
USP16-202ENST00000399973 YWHAHQ04917 246 aaPredicted RBP9.11□□□□□ -0.95
USP16-202ENST00000399973 RAB33AQ14088 237 aa9.11□□□□□ -0.95
USP16-202ENST00000399973 ZBTB6Q15916 424 aa9.11□□□□□ -0.95
USP16-202ENST00000399973 PTPN21Q16825 1174 aa9.11□□□□□ -0.95
USP16-202ENST00000399973 C9orf57Q5W0N0 161 aa9.11□□□□□ -0.95
USP16-202ENST00000399973 LMBRD2Q68DH5 695 aaPredicted RBP9.11□□□□□ -0.95
USP16-202ENST00000399973 LILRA6Q6PI73 481 aa9.11□□□□□ -0.95
USP16-202ENST00000399973 CRELD2Q6UXH1 353 aaPredicted RBP9.11□□□□□ -0.95
USP16-202ENST00000399973 HS2ST1Q7LGA3 356 aa9.11□□□□□ -0.95
USP16-202ENST00000399973 OTOP3Q7RTS5 596 aa9.11□□□□□ -0.95
USP16-202ENST00000399973 GPD1LQ8N335 351 aa9.11□□□□□ -0.95
USP16-202ENST00000399973 HDAC7Q8WUI4 952 aa9.11□□□□□ -0.95
USP16-202ENST00000399973 ZNF707Q96C28 371 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms