RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 SLC16A1P53985 500 aa12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 NCKAP1LP55160 1127 aa12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 PLOD1Q02809 727 aaPredicted RBP12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 HIST2H2ACQ16777 129 aaPredicted RBP12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 SYCP2LQ5T4T6 812 aa12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 HIST2H2AA3Q6FI13 130 aa12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 FRMD5Q7Z6J6 570 aa12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 ARHGEF26Q96DR7 871 aa12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 VPS50Q96JG6 964 aa12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 ESYT3A0FGR9 886 aa12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 KLHL2O95198 593 aa12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 PRKCBP05771 671 aa12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 GRM4Q14833 912 aa12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 TMEM47Q9BQJ4 181 aa12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 NLRP1Q9C000 1473 aa12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 RNF103O00237 685 aa12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 H2AFYO75367 372 aaKnown RBP12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 ALDH6A1Q02252 535 aaKnown RBP12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 TTC39BQ5VTQ0 682 aaPredicted RBP12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 M0R3G1 203 aa12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 LARGE1O95461 756 aa12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 CYP2D6P10635 497 aa12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 ST13P50502 369 aaKnown RBP12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 CACNB3P54284 484 aa12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 MTFR1Q15390 333 aa12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 STILQ15468 1287 aa12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 PCSK7Q16549 785 aa12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 PRPF18Q99633 342 aaKnown RBP12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 RAD18Q9NS91 495 aa12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 RIC8BQ9NVN3 520 aa12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 CEP170Q5SW79 1584 aa12.9□□□□□ -0.35
CACNA1C-219ENST00000399649 AGTP01019 485 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 SERPINB1P30740 379 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 GPSM2P81274 684 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 WLSQ5T9L3 541 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 ADGRF4Q8IZF3 695 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 HS6ST3Q8IZP7 471 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 CALML6Q8TD86 181 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 DTX3LQ8TDB6 740 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 RASSF9O75901 435 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 TERF2Q15554 542 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 ANKS6Q68DC2 871 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 SENP7Q9BQF6 1050 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 CATSPERBQ9H7T0 1116 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 APPL1Q9UKG1 709 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 EFCAB6Q5THR3 1501 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 MAP3K13O43283 966 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 PHF2O75151 1096 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 SCP2P22307 547 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 CDC42EP1Q00587 391 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 P3H2Q8IVL5 708 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 GLYCTKQ8IVS8 523 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 PCMTD2Q9NV79 361 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 PSMC3IPQ9P2W1 217 aaPredicted RBP12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 HDAC6Q9UBN7 1215 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 PLEKHG1Q9ULL1 1385 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 UTYO14607 1347 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 ALDH1A2O94788 518 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 C4BPBP20851 252 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 KDM5CP41229 1560 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 LRRC36Q1X8D7 754 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 C16orf62Q7Z3J2 963 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 C19orf60Q96EN9 201 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 DEPDC7Q96QD5 511 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 RBBP8Q99708 897 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 APOL5Q9BWW9 433 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 SRP68Q9UHB9 627 aaKnown RBP12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 EVPLLA8MZ36 301 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 CYP26A1O43174 497 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 EPB42P16452 691 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 CASP1P29466 404 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 ZNF200P98182 395 aaPredicted RBP12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 EFL1Q7Z2Z2 1120 aaKnown RBP12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 GALNT4Q8N4A0 578 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 RAET1EQ8TD07 263 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 TSEN34Q9BSV6 310 aaKnown RBP12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 BBS2Q9BXC9 721 aa12.89□□□□□ -0.35
CACNA1C-219ENST00000399649 KBTBD13C9JR72 458 aa12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 KIAA0391O15091 583 aaKnown RBP12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 YWHABP31946 246 aaKnown RBP12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 MFSD4BQ5TF39 518 aa12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 TRIM48Q8IWZ4 208 aa12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 AGGF1Q8N302 714 aaeCLIP12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 SLC25A41Q8N5S1 370 aa12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 VPS37AQ8NEZ2 397 aa12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 C18orf8Q96DM3 657 aa12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 TIPINQ9BVW5 301 aa12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 BRD8Q9H0E9 1235 aa12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 TDRD3Q9H7E2 651 aaKnown RBP12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 ZC3H7BQ9UGR2 993 aaKnown RBP12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 HEG1Q9ULI3 1381 aa12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 SUSD4Q5VX71 490 aa12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 TMED8Q6PL24 325 aaPredicted RBP12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 RNPC3Q96LT9 517 aaKnown RBP12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 KATNAL1Q9BW62 490 aa12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 PRRG1O14668 218 aa12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 SLC16A3O15427 465 aaKnown RBP12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 FYNP06241 537 aa12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 APRTP07741 180 aa12.88□□□□□ -0.35
CACNA1C-219ENST00000399649 OLFML2BQ68BL8 750 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms