RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 CA4P22748 312 aa14.84□□□□□ -0.03
APOB-202ENST00000399256 PPP2R5CQ13362 524 aa14.84□□□□□ -0.03
APOB-202ENST00000399256 CERKLQ49MI3 558 aaPredicted RBP14.84□□□□□ -0.03
APOB-202ENST00000399256 WASHC2DQ5SRD0 308 aa14.84□□□□□ -0.03
APOB-202ENST00000399256 CCDC125Q86Z20 511 aa14.84□□□□□ -0.03
APOB-202ENST00000399256 MAIP1Q8WWC4 291 aa14.84□□□□□ -0.03
APOB-202ENST00000399256 CCDC17Q96LX7 622 aa14.84□□□□□ -0.03
APOB-202ENST00000399256 SH2D3AQ9BRG2 576 aa14.84□□□□□ -0.03
APOB-202ENST00000399256 KLRG2A4D1S0 409 aaPredicted RBP14.83□□□□□ -0.03
APOB-202ENST00000399256 P4HA2O15460 535 aa14.83□□□□□ -0.03
APOB-202ENST00000399256 ADRB2P07550 413 aa14.83□□□□□ -0.03
APOB-202ENST00000399256 KLC1Q07866 573 aa14.83□□□□□ -0.03
APOB-202ENST00000399256 FASTKD3Q14CZ7 662 aaKnown RBP14.83□□□□□ -0.03
APOB-202ENST00000399256 PDK4Q16654 411 aa14.83□□□□□ -0.03
APOB-202ENST00000399256 APBB1IPQ7Z5R6 666 aaPredicted RBP14.83□□□□□ -0.03
APOB-202ENST00000399256 CEP120Q8N960 986 aa14.83□□□□□ -0.03
APOB-202ENST00000399256 XXYLT1Q8NBI6 393 aa14.83□□□□□ -0.03
APOB-202ENST00000399256 UCMAQ8WVF2 138 aa14.83□□□□□ -0.03
APOB-202ENST00000399256 SMC6Q96SB8 1091 aa14.83□□□□□ -0.03
APOB-202ENST00000399256 UBN1Q9NPG3 1134 aa14.83□□□□□ -0.03
APOB-202ENST00000399256 PAPOLBQ9NRJ5 636 aaKnown RBP14.83□□□□□ -0.03
APOB-202ENST00000399256 PKD2L1Q9P0L9 805 aa14.83□□□□□ -0.03
APOB-202ENST00000399256 DLGAP2Q9P1A6 1054 aa14.83□□□□□ -0.03
APOB-202ENST00000399256 NEU2Q9Y3R4 380 aa14.83□□□□□ -0.03
APOB-202ENST00000399256 NUMBLQ9Y6R0 609 aa14.83□□□□□ -0.03
APOB-202ENST00000399256 MROH7Q68CQ1 1323 aa14.83□□□□□ -0.03
APOB-202ENST00000399256 NDUFB10O96000 172 aa14.83□□□□□ -0.04
APOB-202ENST00000399256 FGFR1P11362 822 aa14.83□□□□□ -0.04
APOB-202ENST00000399256 KRT5P13647 590 aa14.83□□□□□ -0.04
APOB-202ENST00000399256 ACADSP16219 412 aa14.83□□□□□ -0.04
APOB-202ENST00000399256 RFC5P40937 340 aa14.83□□□□□ -0.04
APOB-202ENST00000399256 RASSF2P50749 326 aa14.83□□□□□ -0.04
APOB-202ENST00000399256 PAPOLAP51003 745 aaKnown RBP14.83□□□□□ -0.04
APOB-202ENST00000399256 RBBP5Q15291 538 aaKnown RBP14.83□□□□□ -0.04
APOB-202ENST00000399256 KHDC1Q4VXA5 237 aaKnown RBP14.83□□□□□ -0.04
APOB-202ENST00000399256 PCNX4Q63HM2 1172 aa14.83□□□□□ -0.04
APOB-202ENST00000399256 NLRP9Q7RTR0 991 aa14.83□□□□□ -0.04
APOB-202ENST00000399256 OTOAQ7RTW8 1153 aa14.83□□□□□ -0.04
APOB-202ENST00000399256 TRMT1LQ7Z2T5 733 aaKnown RBP14.83□□□□□ -0.04
APOB-202ENST00000399256 MTDHQ86UE4 582 aaKnown RBP14.83□□□□□ -0.04
APOB-202ENST00000399256 MKL1Q969V6 931 aa14.83□□□□□ -0.04
APOB-202ENST00000399256 DDX27Q96GQ7 796 aaKnown RBP14.83□□□□□ -0.04
APOB-202ENST00000399256 NMRK1Q9NWW6 199 aa14.83□□□□□ -0.04
APOB-202ENST00000399256 NYAP2Q9P242 653 aa14.83□□□□□ -0.04
APOB-202ENST00000399256 USP20Q9Y2K6 914 aa14.83□□□□□ -0.04
APOB-202ENST00000399256 WDR91A4D1P6 747 aa14.83□□□□□ -0.04
APOB-202ENST00000399256 CCDC6Q16204 474 aa14.83□□□□□ -0.04
APOB-202ENST00000399256 HHATQ5VTY9 493 aa14.83□□□□□ -0.04
APOB-202ENST00000399256 PADI6Q6TGC4 694 aa14.83□□□□□ -0.04
APOB-202ENST00000399256 KCTD17Q8N5Z5 321 aa14.83□□□□□ -0.04
APOB-202ENST00000399256 CCDC89Q8N998 374 aa14.83□□□□□ -0.04
APOB-202ENST00000399256 MIPEPQ99797 713 aa14.83□□□□□ -0.04
APOB-202ENST00000399256 DCTN4Q9UJW0 460 aa14.83□□□□□ -0.04
APOB-202ENST00000399256 A0A1W2PPM1 405 aa14.82□□□□□ -0.04
APOB-202ENST00000399256 PLS3P13797 630 aa14.82□□□□□ -0.04
APOB-202ENST00000399256 PECAM1P16284 738 aaPredicted RBP14.82□□□□□ -0.04
APOB-202ENST00000399256 MARK3P27448 753 aa14.82□□□□□ -0.04
APOB-202ENST00000399256 RIBC1Q8N443 379 aaPredicted RBP14.82□□□□□ -0.04
APOB-202ENST00000399256 GLIS1Q8NBF1 620 aa14.82□□□□□ -0.04
APOB-202ENST00000399256 CPA5Q8WXQ8 436 aa14.82□□□□□ -0.04
APOB-202ENST00000399256 CFAP57Q96MR6 1250 aa14.82□□□□□ -0.04
APOB-202ENST00000399256 ZNF577Q9BSK1 485 aa14.82□□□□□ -0.04
APOB-202ENST00000399256 VPS37BQ9H9H4 285 aa14.82□□□□□ -0.04
APOB-202ENST00000399256 TOPORSQ9NS56 1045 aaPredicted RBP14.82□□□□□ -0.04
APOB-202ENST00000399256 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.82□□□□□ -0.04
APOB-202ENST00000399256 GREB1LQ9C091 1923 aaPredicted RBP14.82□□□□□ -0.04
APOB-202ENST00000399256 ATRNL1Q5VV63 1379 aa14.82□□□□□ -0.04
APOB-202ENST00000399256 NVLO15381 856 aaKnown RBP14.82□□□□□ -0.04
APOB-202ENST00000399256 PRPF4O43172 522 aaKnown RBP eCLIP14.82□□□□□ -0.042e-20■■■■■ 28.9
APOB-202ENST00000399256 ARP10275 920 aa14.82□□□□□ -0.04
APOB-202ENST00000399256 SP100P23497 879 aaPredicted RBP14.82□□□□□ -0.04
APOB-202ENST00000399256 PTPN4P29074 926 aa14.82□□□□□ -0.04
APOB-202ENST00000399256 SSR1P43307 286 aaKnown RBP14.82□□□□□ -0.04
APOB-202ENST00000399256 OVGP1Q12889 678 aa14.82□□□□□ -0.04
APOB-202ENST00000399256 CLEC16AQ2KHT3 1053 aa14.82□□□□□ -0.04
APOB-202ENST00000399256 RNF220Q5VTB9 566 aa14.82□□□□□ -0.04
APOB-202ENST00000399256 CBWD2Q8IUF1 395 aa14.82□□□□□ -0.04
APOB-202ENST00000399256 EGFL6Q8IUX8 553 aa14.82□□□□□ -0.04
APOB-202ENST00000399256 RBBP8NLQ8NC74 664 aaPredicted RBP14.82□□□□□ -0.04
APOB-202ENST00000399256 RNF217Q8TC41 542 aa14.82□□□□□ -0.04
APOB-202ENST00000399256 DDX1Q92499 740 aaKnown RBP14.82□□□□□ -0.04
APOB-202ENST00000399256 ACCSQ96QU6 501 aa14.82□□□□□ -0.04
APOB-202ENST00000399256 PCDHAC2Q9Y5I4 1007 aa14.82□□□□□ -0.04
APOB-202ENST00000399256 ADAMTSL1Q8N6G6 1762 aa14.82□□□□□ -0.04
APOB-202ENST00000399256 SMCHD1A6NHR9 2005 aa14.81□□□□□ -0.04
APOB-202ENST00000399256 GRIN3BO60391 1043 aa14.81□□□□□ -0.04
APOB-202ENST00000399256 ZSCAN5DPP0CG00 497 aa14.81□□□□□ -0.04
APOB-202ENST00000399256 CD58P19256 250 aa14.81□□□□□ -0.04
APOB-202ENST00000399256 MUTP22033 750 aa14.81□□□□□ -0.04
APOB-202ENST00000399256 CENPCQ03188 943 aa14.81□□□□□ -0.04
APOB-202ENST00000399256 MYBPC2Q14324 1141 aa14.81□□□□□ -0.04
APOB-202ENST00000399256 DSTYKQ6XUX3 929 aa14.81□□□□□ -0.04
APOB-202ENST00000399256 ANKS1BQ7Z6G8 1248 aa14.81□□□□□ -0.04
APOB-202ENST00000399256 ZCCHC9Q8N567 271 aaKnown RBP14.81□□□□□ -0.04
APOB-202ENST00000399256 BBOF1Q8ND07 529 aa14.81□□□□□ -0.04
APOB-202ENST00000399256 HELQQ8TDG4 1101 aa14.81□□□□□ -0.04
APOB-202ENST00000399256 TMEM206Q9H813 350 aa14.81□□□□□ -0.04
APOB-202ENST00000399256 DCLRE1BQ9H816 532 aa14.81□□□□□ -0.04
APOB-202ENST00000399256 METTL5Q9NRN9 209 aaKnown RBP14.81□□□□□ -0.04
APOB-202ENST00000399256 KLHL11Q9NVR0 708 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms