RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 FAM187BQ17R55 369 aa18.89■□□□□ 0.61
HLA-DQB1-204ENST00000399084 CCDC137Q6PK04 289 aaKnown RBP18.89■□□□□ 0.61
HLA-DQB1-204ENST00000399084 TMEM270Q6UE05 265 aa18.89■□□□□ 0.61
HLA-DQB1-204ENST00000399084 ZNF467Q7Z7K2 595 aaPredicted RBP18.89■□□□□ 0.61
HLA-DQB1-204ENST00000399084 IFNLR1Q8IU57 520 aaPredicted RBP18.89■□□□□ 0.61
HLA-DQB1-204ENST00000399084 PTPRHQ9HD43 1115 aa18.89■□□□□ 0.61
HLA-DQB1-204ENST00000399084 TXNRD2Q9NNW7 524 aa18.89■□□□□ 0.61
HLA-DQB1-204ENST00000399084 PARVAQ9NVD7 372 aa18.89■□□□□ 0.61
HLA-DQB1-204ENST00000399084 ADAM22Q9P0K1 906 aa18.89■□□□□ 0.61
HLA-DQB1-204ENST00000399084 TNFSF13BQ9Y275 285 aa18.89■□□□□ 0.61
HLA-DQB1-204ENST00000399084 H0YGN5 161 aa18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 ARIH2O95376 493 aa18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 CALB1P05937 261 aa18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 EPHX2P34913 555 aa18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 COILP38432 576 aaPredicted RBP18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 HNRNPH2P55795 449 aaKnown RBP18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 MKRN4PQ13434 485 aaPredicted RBP18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 Q3C1V9 767 aa18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 TTMPQ5BVD1 217 aa18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 AGBL2Q5U5Z8 902 aa18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 GRK7Q8WTQ7 553 aa18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 TXLNGYQ9BZA5 131 aa18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 FHDC1Q9C0D6 1143 aaPredicted RBP18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 NIF3L1Q9GZT8 377 aa18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 TMBIM4Q9HC24 238 aa18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 VTA1Q9NP79 307 aa18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 ZDHHC18Q9NUE0 388 aa18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 PRMT7Q9NVM4 692 aaPredicted RBP18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 ZHX1Q9UKY1 873 aaPredicted RBP18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 NUB1Q9Y5A7 615 aa18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 NFS1Q9Y697 457 aa18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 PTPRJQ12913 1337 aa18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 PASKQ96RG2 1323 aa18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 COL1A2P08123 1366 aa18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 ABLIM1O14639 778 aa18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 SRGAP2CP0DJJ0 459 aa18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 TNFAIP2Q03169 654 aa18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 TRPC3Q13507 836 aa18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 SLMAPQ14BN4 828 aa18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 C9orf131Q5VYM1 1079 aa18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 NAA35Q5VZE5 725 aa18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 EEPD1Q7L9B9 569 aa18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 RHOT1Q8IXI2 618 aa18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 OR5B17Q8NGF7 314 aa18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 EMID1Q96A84 441 aaPredicted RBP18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 ARL8AQ96BM9 186 aa18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 CYFIP2Q96F07 1278 aa18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 CELF4Q9BZC1 486 aaKnown RBP18.88■□□□□ 0.61
HLA-DQB1-204ENST00000399084 RBM47A0AV96 593 aaKnown RBP18.87■□□□□ 0.61
HLA-DQB1-204ENST00000399084 ATMINO43313 823 aaPredicted RBP18.87■□□□□ 0.61
HLA-DQB1-204ENST00000399084 PPFIA4O75335 1185 aa18.87■□□□□ 0.61
HLA-DQB1-204ENST00000399084 KRT14P02533 472 aa18.87■□□□□ 0.61
HLA-DQB1-204ENST00000399084 TNNC2P02585 160 aa18.87■□□□□ 0.61
HLA-DQB1-204ENST00000399084 PGK2P07205 417 aa18.87■□□□□ 0.61
HLA-DQB1-204ENST00000399084 RRM1P23921 792 aa18.87■□□□□ 0.61
HLA-DQB1-204ENST00000399084 WNT7BP56706 349 aa18.87■□□□□ 0.61
HLA-DQB1-204ENST00000399084 DHX9Q08211 1270 aaKnown RBP18.87■□□□□ 0.61
HLA-DQB1-204ENST00000399084 ATF7IP2Q5U623 682 aa18.87■□□□□ 0.61
HLA-DQB1-204ENST00000399084 LMBRD2Q68DH5 695 aaPredicted RBP18.87■□□□□ 0.61
HLA-DQB1-204ENST00000399084 DDX42Q86XP3 938 aaKnown RBP eCLIP18.87■□□□□ 0.61
HLA-DQB1-204ENST00000399084 GPRC5AQ8NFJ5 357 aa18.87■□□□□ 0.61
HLA-DQB1-204ENST00000399084 ZNF606Q8WXB4 792 aa18.87■□□□□ 0.61
HLA-DQB1-204ENST00000399084 CPA5Q8WXQ8 436 aa18.87■□□□□ 0.61
HLA-DQB1-204ENST00000399084 ANKRD36BP1Q96IX9 119 aa18.87■□□□□ 0.61
HLA-DQB1-204ENST00000399084 ERVK-5Q9HDB9 667 aa18.87■□□□□ 0.61
HLA-DQB1-204ENST00000399084 IP6K2Q9UHH9 426 aa18.87■□□□□ 0.61
HLA-DQB1-204ENST00000399084 MROH7Q68CQ1 1323 aa18.87■□□□□ 0.61
HLA-DQB1-204ENST00000399084 ZEB2O60315 1214 aa18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 NUDT17P0C025 328 aa18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 EIF4BP23588 611 aaKnown RBP18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 CDH5P33151 784 aaPredicted RBP18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 PHKA2P46019 1235 aa18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 MARCKSL1P49006 195 aa18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 IRAK1P51617 712 aa18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 CAV1Q03135 178 aa18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 ZBTB41Q5SVQ8 909 aa18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 CEP85LQ5SZL2 805 aa18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 LRRC38Q5VT99 294 aa18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 CCDC105Q8IYK2 499 aa18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 KATNAL2Q8IYT4 538 aa18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 TMEM35BQ8NCS4 154 aa18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 SLC10A4Q96EP9 437 aa18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 PABPC3Q9H361 631 aaKnown RBP18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 PCDHGC3Q9UN70 934 aa18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 GOLGB1Q14789 3259 aaKnown RBP18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 IQCA1LA6NCM1 817 aa18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 THAP12O43422 761 aa18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 ECEL1O95672 775 aa18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 GH1P01241 217 aa18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 EDN1P05305 212 aa18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 RARAP10276 462 aa18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 MMP8P22894 467 aa18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 GCLCP48506 637 aaPredicted RBP18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 DRP2Q13474 957 aa18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 MAMLD1Q13495 774 aa18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 SIX1Q15475 284 aaPredicted RBP18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 UAP1Q16222 522 aaPredicted RBP18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 SPOPLQ6IQ16 392 aa18.86■□□□□ 0.61
HLA-DQB1-204ENST00000399084 EFCAB12Q6NXP0 572 aa18.86■□□□□ 0.61
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