RNA–Protein interactions for RNA: ENST00000398427.6

PPME1-202, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best) BASIC

Gene PPME1, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-202ENST00000398427 SURF1Q15526 300 aa12.34□□□□□ -0.43
PPME1-202ENST00000398427 MAN2A1Q16706 1144 aa12.34□□□□□ -0.43
PPME1-202ENST00000398427 RASIP1Q5U651 963 aa12.34□□□□□ -0.43
PPME1-202ENST00000398427 FAM117BQ6P1L5 589 aa12.34□□□□□ -0.43
PPME1-202ENST00000398427 WDR49Q8IV35 697 aa12.34□□□□□ -0.43
PPME1-202ENST00000398427 KIF12Q96FN5 646 aa12.34□□□□□ -0.43
PPME1-202ENST00000398427 MTMR12Q9C0I1 747 aa12.34□□□□□ -0.43
PPME1-202ENST00000398427 MMRN2Q9H8L6 949 aa12.34□□□□□ -0.43
PPME1-202ENST00000398427 C2CD2Q9Y426 696 aa12.34□□□□□ -0.43
PPME1-202ENST00000398427 LRRC10BA6NIK2 292 aa12.33□□□□□ -0.44
PPME1-202ENST00000398427 DGKIO75912 1065 aa12.33□□□□□ -0.44
PPME1-202ENST00000398427 POMCP01189 267 aa12.33□□□□□ -0.44
PPME1-202ENST00000398427 GCLMP48507 274 aa12.33□□□□□ -0.44
PPME1-202ENST00000398427 TMEM132DQ14C87 1099 aa12.33□□□□□ -0.44
PPME1-202ENST00000398427 NAB2Q15742 525 aa12.33□□□□□ -0.44
PPME1-202ENST00000398427 ZBTB6Q15916 424 aa12.33□□□□□ -0.44
PPME1-202ENST00000398427 USP37Q86T82 979 aa12.33□□□□□ -0.44
PPME1-202ENST00000398427 C18orf25Q96B23 403 aaPredicted RBP12.33□□□□□ -0.44
PPME1-202ENST00000398427 CASD1Q96PB1 797 aa12.33□□□□□ -0.44
PPME1-202ENST00000398427 PPP1R10Q96QC0 940 aaKnown RBP12.33□□□□□ -0.44
PPME1-202ENST00000398427 VPS16Q9H269 839 aa12.33□□□□□ -0.44
PPME1-202ENST00000398427 RC3H2Q9HBD1 1191 aaKnown RBP12.33□□□□□ -0.44
PPME1-202ENST00000398427 INTS13Q9NVM9 706 aa12.33□□□□□ -0.44
PPME1-202ENST00000398427 TUBGCP4Q9UGJ1 667 aa12.33□□□□□ -0.44
PPME1-202ENST00000398427 OAS2P29728 719 aaKnown RBP12.33□□□□□ -0.44
PPME1-202ENST00000398427 GUCY2FP51841 1108 aa12.33□□□□□ -0.44
PPME1-202ENST00000398427 COPB1P53618 953 aaKnown RBP12.33□□□□□ -0.44
PPME1-202ENST00000398427 TFAMQ00059 246 aaKnown RBP12.33□□□□□ -0.44
PPME1-202ENST00000398427 SOX4Q06945 474 aaPredicted RBP12.33□□□□□ -0.44
PPME1-202ENST00000398427 KCNH2Q12809 1159 aa12.33□□□□□ -0.44
PPME1-202ENST00000398427 SHHQ15465 462 aa12.33□□□□□ -0.44
PPME1-202ENST00000398427 CBWD6Q4V339 395 aa12.33□□□□□ -0.44
PPME1-202ENST00000398427 NOMO2Q5JPE7 1267 aa12.33□□□□□ -0.44
PPME1-202ENST00000398427 CBWD3Q5JTY5 395 aa12.33□□□□□ -0.44
PPME1-202ENST00000398427 CBWD5Q5RIA9 395 aa12.33□□□□□ -0.44
PPME1-202ENST00000398427 SCARA3Q6AZY7 606 aa12.33□□□□□ -0.44
PPME1-202ENST00000398427 ABI1Q8IZP0 508 aa12.33□□□□□ -0.44
PPME1-202ENST00000398427 LRRN4CLQ8ND94 238 aa12.33□□□□□ -0.44
PPME1-202ENST00000398427 L2HGDHQ9H9P8 463 aa12.33□□□□□ -0.44
PPME1-202ENST00000398427 DERAQ9Y315 318 aa12.33□□□□□ -0.44
PPME1-202ENST00000398427 EIF3CLB5ME19 914 aaKnown RBP12.32□□□□□ -0.44
PPME1-202ENST00000398427 HOXA2O43364 376 aa12.32□□□□□ -0.44
PPME1-202ENST00000398427 B4GALT3O60512 393 aa12.32□□□□□ -0.44
PPME1-202ENST00000398427 ACTN2P35609 894 aa12.32□□□□□ -0.44
PPME1-202ENST00000398427 ZNF75DP51815 510 aa12.32□□□□□ -0.44
PPME1-202ENST00000398427 FANCCQ00597 558 aa12.32□□□□□ -0.44
PPME1-202ENST00000398427 VWA3BQ502W6 1294 aa12.32□□□□□ -0.44
PPME1-202ENST00000398427 C15orf39Q6ZRI6 1047 aa12.32□□□□□ -0.44
PPME1-202ENST00000398427 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.32□□□□□ -0.44
PPME1-202ENST00000398427 NT5DC4Q86YG4 428 aa12.32□□□□□ -0.44
PPME1-202ENST00000398427 ANKRD20A12PQ8NF67 263 aa12.32□□□□□ -0.44
PPME1-202ENST00000398427 EXOC4Q96A65 974 aa12.32□□□□□ -0.44
PPME1-202ENST00000398427 EIF3CQ99613 913 aaKnown RBP12.32□□□□□ -0.44
PPME1-202ENST00000398427 TMEM117Q9H0C3 514 aa12.32□□□□□ -0.44
PPME1-202ENST00000398427 NDST4Q9H3R1 872 aa12.32□□□□□ -0.44
PPME1-202ENST00000398427 GOLGA2P5Q9HBQ8 144 aa12.32□□□□□ -0.44
PPME1-202ENST00000398427 TBC1D13Q9NVG8 400 aa12.32□□□□□ -0.44
PPME1-202ENST00000398427 HCSTQ9UBK5 93 aa12.32□□□□□ -0.44
PPME1-202ENST00000398427 SLC4A7Q9Y6M7 1214 aa12.32□□□□□ -0.44
PPME1-202ENST00000398427 TBKBP1A7MCY6 615 aa12.32□□□□□ -0.44
PPME1-202ENST00000398427 ATP8B1O43520 1251 aa12.32□□□□□ -0.44
PPME1-202ENST00000398427 GJB5O95377 273 aa12.32□□□□□ -0.44
PPME1-202ENST00000398427 AFPP02771 609 aaKnown RBP12.32□□□□□ -0.44
PPME1-202ENST00000398427 C4BPAP04003 597 aaKnown RBP12.32□□□□□ -0.44
PPME1-202ENST00000398427 THP07101 528 aa12.32□□□□□ -0.44
PPME1-202ENST00000398427 TMEM191BP0C7N4 346 aa12.32□□□□□ -0.44
PPME1-202ENST00000398427 FMO5P49326 533 aa12.32□□□□□ -0.44
PPME1-202ENST00000398427 GRIK3Q13003 919 aa12.32□□□□□ -0.44
PPME1-202ENST00000398427 TDRD10Q5VZ19 366 aaKnown RBP12.32□□□□□ -0.44
PPME1-202ENST00000398427 SV2AQ7L0J3 742 aa12.32□□□□□ -0.44
PPME1-202ENST00000398427 DRC7Q8IY82 874 aa12.32□□□□□ -0.44
PPME1-202ENST00000398427 ZNF689Q96CS4 500 aaPredicted RBP12.32□□□□□ -0.44
PPME1-202ENST00000398427 SLC9A7Q96T83 725 aa12.32□□□□□ -0.44
PPME1-202ENST00000398427 UBE2OQ9C0C9 1292 aaKnown RBP12.32□□□□□ -0.44
PPME1-202ENST00000398427 MTIF3Q9H2K0 278 aaKnown RBP12.32□□□□□ -0.44
PPME1-202ENST00000398427 CACNG4Q9UBN1 327 aa12.32□□□□□ -0.44
PPME1-202ENST00000398427 UBQLN1Q9UMX0 589 aaKnown RBP12.32□□□□□ -0.44
PPME1-202ENST00000398427 SERPINC1P01008 464 aa12.31□□□□□ -0.44
PPME1-202ENST00000398427 MXI1P50539 228 aa12.31□□□□□ -0.44
PPME1-202ENST00000398427 DUOXA2Q1HG44 320 aa12.31□□□□□ -0.44
PPME1-202ENST00000398427 ZACNQ401N2 412 aa12.31□□□□□ -0.44
PPME1-202ENST00000398427 PAN2Q504Q3 1202 aaKnown RBP12.31□□□□□ -0.44
PPME1-202ENST00000398427 TMCO3Q6UWJ1 677 aa12.31□□□□□ -0.44
PPME1-202ENST00000398427 C1orf127Q8N9H9 656 aa12.31□□□□□ -0.44
PPME1-202ENST00000398427 CXorf38Q8TB03 319 aa12.31□□□□□ -0.44
PPME1-202ENST00000398427 URGCPQ8TCY9 931 aa12.31□□□□□ -0.44
PPME1-202ENST00000398427 PPM1EQ8WY54 764 aa12.31□□□□□ -0.44
PPME1-202ENST00000398427 ANKRD36BP1Q96IX9 119 aa12.31□□□□□ -0.44
PPME1-202ENST00000398427 RNPC3Q96LT9 517 aaKnown RBP12.31□□□□□ -0.44
PPME1-202ENST00000398427 TSPAN18Q96SJ8 248 aa12.31□□□□□ -0.44
PPME1-202ENST00000398427 TMEM8AQ9HCN3 771 aa12.31□□□□□ -0.44
PPME1-202ENST00000398427 GBF1Q92538 1859 aa12.31□□□□□ -0.44
PPME1-202ENST00000398427 A0A1B0GTH6 734 aa12.31□□□□□ -0.44
PPME1-202ENST00000398427 PES1O00541 588 aaKnown RBP12.31□□□□□ -0.44
PPME1-202ENST00000398427 DDHD2O94830 711 aa12.31□□□□□ -0.44
PPME1-202ENST00000398427 CPP00450 1065 aa12.31□□□□□ -0.44
PPME1-202ENST00000398427 ATP2A2P16615 1042 aaKnown RBP12.31□□□□□ -0.44
PPME1-202ENST00000398427 GTF2H1P32780 548 aa12.31□□□□□ -0.44
PPME1-202ENST00000398427 ARHGAP29Q52LW3 1261 aa12.31□□□□□ -0.44
PPME1-202ENST00000398427 MMS22LQ6ZRQ5 1243 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms