RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 ACAD10Q6JQN1 1059 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 RWDD4Q6NW29 188 aaKnown RBP13.11□□□□□ -0.31
SOCS6-201ENST00000397942 MICALL2Q8IY33 904 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 RBM46Q8TBY0 533 aaKnown RBP13.11□□□□□ -0.31
SOCS6-201ENST00000397942 POP1Q99575 1024 aaKnown RBP13.11□□□□□ -0.31
SOCS6-201ENST00000397942 EFHD1Q9BUP0 239 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 SMYD3Q9H7B4 428 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 PNMA3Q9UL41 463 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 NFIBO00712 420 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 PFDN6O15212 129 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 RAD23BP54727 409 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 SEZ6Q53EL9 994 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 TAF1BQ53T94 588 aaPredicted RBP13.11□□□□□ -0.31
SOCS6-201ENST00000397942 ABI1Q8IZP0 508 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 BEST2Q8NFU1 509 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 RAPGEF5Q92565 580 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 CAVIN3Q969G5 261 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 EML1O00423 815 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 PIK3R2O00459 728 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 KIF3CO14782 793 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 SNRPFP62306 86 aaKnown RBP13.11□□□□□ -0.31
SOCS6-201ENST00000397942 OCRLQ01968 901 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 EN1Q05925 392 aaPredicted RBP13.11□□□□□ -0.31
SOCS6-201ENST00000397942 MXD4Q14582 209 aaPredicted RBP13.11□□□□□ -0.31
SOCS6-201ENST00000397942 SMTNL2Q2TAL5 461 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 METTL23Q86XA0 190 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 NIF3L1Q9GZT8 377 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 CPSF3Q9UKF6 684 aaKnown RBP13.11□□□□□ -0.31
SOCS6-201ENST00000397942 CHMP2BQ9UQN3 213 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 TNS2Q63HR2 1409 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 ZBTB39O15060 712 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 PJA2O43164 708 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 ICAM1P05362 532 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 PDHA1P08559 390 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 GTF2H1P32780 548 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 KPNA2P52292 529 aaKnown RBP13.11□□□□□ -0.31
SOCS6-201ENST00000397942 C1orf146Q5VVC0 180 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 XRRA1Q6P2D8 792 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 C4orf50Q6ZRC1 276 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 HAS1Q92839 578 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 ATP6V1E2Q96A05 226 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 ZC3H7BQ9UGR2 993 aaKnown RBP13.11□□□□□ -0.31
SOCS6-201ENST00000397942 ANGPTL2Q9UKU9 493 aa13.11□□□□□ -0.31
SOCS6-201ENST00000397942 TRPA1O75762 1119 aa13.1□□□□□ -0.31
SOCS6-201ENST00000397942 SLITRK3O94933 977 aa13.1□□□□□ -0.31
SOCS6-201ENST00000397942 OATP04181 439 aa13.1□□□□□ -0.31
SOCS6-201ENST00000397942 SLURP2P0DP57 97 aa13.1□□□□□ -0.31
SOCS6-201ENST00000397942 TAL1P17542 331 aaPredicted RBP13.1□□□□□ -0.31
SOCS6-201ENST00000397942 HNRNPH1P31943 449 aaKnown RBP13.1□□□□□ -0.31
SOCS6-201ENST00000397942 RFC1P35251 1148 aaPredicted RBP13.1□□□□□ -0.31
SOCS6-201ENST00000397942 RYBPQ8N488 228 aaPredicted RBP13.1□□□□□ -0.31
SOCS6-201ENST00000397942 ALKBH8Q96BT7 664 aaKnown RBP13.1□□□□□ -0.31
SOCS6-201ENST00000397942 DNAJC19Q96DA6 116 aa13.1□□□□□ -0.31
SOCS6-201ENST00000397942 PDCD2LQ9BRP1 358 aa13.1□□□□□ -0.31
SOCS6-201ENST00000397942 PCDHGC5Q9Y5F6 944 aa13.1□□□□□ -0.31
SOCS6-201ENST00000397942 GOLGA8QA0A0J9YX86 632 aa13.1□□□□□ -0.31
SOCS6-201ENST00000397942 GOLGA8OA6NCC3 632 aa13.1□□□□□ -0.31
SOCS6-201ENST00000397942 GOLGA8NF8WBI6 632 aa13.1□□□□□ -0.31
SOCS6-201ENST00000397942 MYBPC2Q14324 1141 aa13.1□□□□□ -0.31
SOCS6-201ENST00000397942 LRRC71Q8N4P6 559 aa13.1□□□□□ -0.31
SOCS6-201ENST00000397942 CYP4F11Q9HBI6 524 aa13.1□□□□□ -0.31
SOCS6-201ENST00000397942 C19orf81C9J6K1 198 aa13.1□□□□□ -0.31
SOCS6-201ENST00000397942 KRT10P13645 584 aa13.1□□□□□ -0.31
SOCS6-201ENST00000397942 TMEM119Q4V9L6 283 aa13.1□□□□□ -0.31
SOCS6-201ENST00000397942 SAMD7Q7Z3H4 446 aa13.1□□□□□ -0.31
SOCS6-201ENST00000397942 DHX38Q92620 1227 aaKnown RBP13.1□□□□□ -0.31
SOCS6-201ENST00000397942 SLC4A1P02730 911 aa13.1□□□□□ -0.31
SOCS6-201ENST00000397942 IL17AQ16552 155 aa13.1□□□□□ -0.31
SOCS6-201ENST00000397942 APOBEC3HQ6NTF7 200 aaKnown RBP13.1□□□□□ -0.31
SOCS6-201ENST00000397942 MARCOQ9UEW3 520 aaPredicted RBP13.1□□□□□ -0.31
SOCS6-201ENST00000397942 SH3BGRP55822 239 aaPredicted RBP13.1□□□□□ -0.31
SOCS6-201ENST00000397942 ZNF677Q86XU0 584 aa13.1□□□□□ -0.31
SOCS6-201ENST00000397942 TSEN2Q8NCE0 465 aaKnown RBP13.1□□□□□ -0.31
SOCS6-201ENST00000397942 MMTAG2Q9BU76 263 aaKnown RBP13.1□□□□□ -0.31
SOCS6-201ENST00000397942 SIK2Q9H0K1 926 aa13.1□□□□□ -0.31
SOCS6-201ENST00000397942 MX2P20592 715 aa13.09□□□□□ -0.31
SOCS6-201ENST00000397942 OTOP1Q7RTM1 612 aa13.09□□□□□ -0.31
SOCS6-201ENST00000397942 APOBEC3FQ8IUX4 373 aaKnown RBP13.09□□□□□ -0.31
SOCS6-201ENST00000397942 EPS8L3Q8TE67 593 aaKnown RBP13.09□□□□□ -0.31
SOCS6-201ENST00000397942 SLC5A5Q92911 643 aa13.09□□□□□ -0.31
SOCS6-201ENST00000397942 LRGUKQ96M69 825 aa13.09□□□□□ -0.31
SOCS6-201ENST00000397942 SERPINI1Q99574 410 aa13.09□□□□□ -0.31
SOCS6-201ENST00000397942 A0A0A6YYK5 440 aaPredicted RBP13.09□□□□□ -0.31
SOCS6-201ENST00000397942 KCNN4O15554 427 aa13.09□□□□□ -0.31
SOCS6-201ENST00000397942 MUTP22033 750 aa13.09□□□□□ -0.31
SOCS6-201ENST00000397942 CASP5P51878 434 aa13.09□□□□□ -0.31
SOCS6-201ENST00000397942 PTENP60484 403 aa13.09□□□□□ -0.31
SOCS6-201ENST00000397942 AP1ARQ63HQ0 302 aa13.09□□□□□ -0.31
SOCS6-201ENST00000397942 RFX8Q6ZV50 586 aa13.09□□□□□ -0.31
SOCS6-201ENST00000397942 LRRC6Q86X45 466 aa13.09□□□□□ -0.31
SOCS6-201ENST00000397942 WWP1Q9H0M0 922 aa13.09□□□□□ -0.31
SOCS6-201ENST00000397942 PSMC3IPQ9P2W1 217 aaPredicted RBP13.09□□□□□ -0.31
SOCS6-201ENST00000397942 ITSN1Q15811 1721 aa13.09□□□□□ -0.31
SOCS6-201ENST00000397942 LMNAP02545 664 aaKnown RBP13.09□□□□□ -0.31
SOCS6-201ENST00000397942 KDSRQ06136 332 aa13.09□□□□□ -0.31
SOCS6-201ENST00000397942 KRT80Q6KB66 452 aa13.09□□□□□ -0.31
SOCS6-201ENST00000397942 TMBIM4Q9HC24 238 aa13.09□□□□□ -0.31
SOCS6-201ENST00000397942 NPHS2Q9NP85 383 aa13.09□□□□□ -0.31
SOCS6-201ENST00000397942 PRDM4Q9UKN5 801 aa13.09□□□□□ -0.31
SOCS6-201ENST00000397942 MYBL2P10244 700 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms