RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 JADE1Q6IE81 842 aa20.78■□□□□ 0.92
PDLIM2-204ENST00000397760 CD302Q8IX05 232 aa20.78■□□□□ 0.92
PDLIM2-204ENST00000397760 DIS3LQ8TF46 1054 aaKnown RBP20.78■□□□□ 0.92
PDLIM2-204ENST00000397760 APOL6Q9BWW8 343 aa20.78■□□□□ 0.92
PDLIM2-204ENST00000397760 GUCA1BQ9UMX6 200 aa20.78■□□□□ 0.92
PDLIM2-204ENST00000397760 PLAGL2Q9UPG8 496 aa20.78■□□□□ 0.92
PDLIM2-204ENST00000397760 DAAM1Q9Y4D1 1078 aa20.78■□□□□ 0.92
PDLIM2-204ENST00000397760 TNNC2P02585 160 aa20.77■□□□□ 0.92
PDLIM2-204ENST00000397760 NFICP08651 508 aa20.77■□□□□ 0.92
PDLIM2-204ENST00000397760 BFSP2Q13515 415 aa20.77■□□□□ 0.92
PDLIM2-204ENST00000397760 KIAA1328Q86T90 577 aa20.77■□□□□ 0.92
PDLIM2-204ENST00000397760 ARHGEF19Q8IW93 802 aa20.77■□□□□ 0.92
PDLIM2-204ENST00000397760 JAKMIP2Q96AA8 810 aa20.77■□□□□ 0.92
PDLIM2-204ENST00000397760 NHEJ1Q9H9Q4 299 aaPredicted RBP20.77■□□□□ 0.92
PDLIM2-204ENST00000397760 PLEKHA5Q9HAU0 1116 aa20.77■□□□□ 0.92
PDLIM2-204ENST00000397760 L1RE1Q9UN81 338 aa20.77■□□□□ 0.92
PDLIM2-204ENST00000397760 IPPQ9Y573 584 aa20.77■□□□□ 0.92
PDLIM2-204ENST00000397760 SELPP16109 830 aa20.76■□□□□ 0.91
PDLIM2-204ENST00000397760 RFX1P22670 979 aa20.76■□□□□ 0.91
PDLIM2-204ENST00000397760 AKAP5P24588 427 aa20.76■□□□□ 0.91
PDLIM2-204ENST00000397760 SFMBT2Q5VUG0 894 aa20.76■□□□□ 0.91
PDLIM2-204ENST00000397760 ANKLE1Q8NAG6 615 aa20.76■□□□□ 0.91
PDLIM2-204ENST00000397760 SMG8Q8ND04 991 aaKnown RBP20.76■□□□□ 0.91
PDLIM2-204ENST00000397760 PI4K2AQ9BTU6 479 aa20.76■□□□□ 0.91
PDLIM2-204ENST00000397760 STK33Q9BYT3 514 aa20.76■□□□□ 0.91
PDLIM2-204ENST00000397760 UBE2TQ9NPD8 197 aaPredicted RBP20.76■□□□□ 0.91
PDLIM2-204ENST00000397760 SAR1BQ9Y6B6 198 aa20.76■□□□□ 0.91
PDLIM2-204ENST00000397760 ZC3H11AO75152 810 aaKnown RBP eCLIP20.76■□□□□ 0.91
PDLIM2-204ENST00000397760 RECQL4O94761 1208 aa20.76■□□□□ 0.91
PDLIM2-204ENST00000397760 COL6A1P12109 1028 aa20.76■□□□□ 0.91
PDLIM2-204ENST00000397760 OAS2P29728 719 aaKnown RBP20.76■□□□□ 0.91
PDLIM2-204ENST00000397760 NCOA4Q13772 614 aa20.76■□□□□ 0.91
PDLIM2-204ENST00000397760 WDR44Q5JSH3 913 aa20.76■□□□□ 0.91
PDLIM2-204ENST00000397760 LRRC8DQ7L1W4 858 aa20.76■□□□□ 0.91
PDLIM2-204ENST00000397760 ANKRD33Q7Z3H0 272 aa20.76■□□□□ 0.91
PDLIM2-204ENST00000397760 SYN2Q92777 582 aaPredicted RBP20.76■□□□□ 0.91
PDLIM2-204ENST00000397760 SNX27Q96L92 541 aa20.76■□□□□ 0.91
PDLIM2-204ENST00000397760 NT5C1BQ96P26 610 aa20.76■□□□□ 0.91
PDLIM2-204ENST00000397760 PARP2Q9UGN5 583 aa20.76■□□□□ 0.91
PDLIM2-204ENST00000397760 PCDHB2Q9Y5E7 798 aa20.76■□□□□ 0.91
PDLIM2-204ENST00000397760 CST3P01034 146 aaPredicted RBP20.75■□□□□ 0.91
PDLIM2-204ENST00000397760 VAV2P52735 878 aa20.75■□□□□ 0.91
PDLIM2-204ENST00000397760 JAM2P57087 298 aa20.75■□□□□ 0.91
PDLIM2-204ENST00000397760 MBTPS1Q14703 1052 aa20.75■□□□□ 0.91
PDLIM2-204ENST00000397760 DRAP1Q14919 205 aaPredicted RBP20.75■□□□□ 0.91
PDLIM2-204ENST00000397760 TMEM132DQ14C87 1099 aa20.75■□□□□ 0.91
PDLIM2-204ENST00000397760 GPIHBP1Q8IV16 184 aa20.75■□□□□ 0.91
PDLIM2-204ENST00000397760 ELMO3Q96BJ8 720 aa20.75■□□□□ 0.91
PDLIM2-204ENST00000397760 KIF12Q96FN5 646 aa20.75■□□□□ 0.91
PDLIM2-204ENST00000397760 PNKPQ96T60 521 aa20.75■□□□□ 0.91
PDLIM2-204ENST00000397760 RNF39Q9H2S5 420 aa20.75■□□□□ 0.91
PDLIM2-204ENST00000397760 FAM105AQ9NUU6 356 aa20.75■□□□□ 0.91
PDLIM2-204ENST00000397760 PSD3Q9NYI0 1048 aa20.75■□□□□ 0.91
PDLIM2-204ENST00000397760 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.75■□□□□ 0.91
PDLIM2-204ENST00000397760 C2CD2Q9Y426 696 aa20.75■□□□□ 0.91
PDLIM2-204ENST00000397760 TARSL2A2RTX5 802 aaKnown RBP20.74■□□□□ 0.91
PDLIM2-204ENST00000397760 DCDC2CA8MYV0 355 aa20.74■□□□□ 0.91
PDLIM2-204ENST00000397760 MGEA5O60502 916 aa20.74■□□□□ 0.91
PDLIM2-204ENST00000397760 LCA5LO95447 670 aa20.74■□□□□ 0.91
PDLIM2-204ENST00000397760 DSC3Q14574 896 aa20.74■□□□□ 0.91
PDLIM2-204ENST00000397760 ARHGAP44Q17R89 818 aa20.74■□□□□ 0.91
PDLIM2-204ENST00000397760 SCARA3Q6AZY7 606 aa20.74■□□□□ 0.91
PDLIM2-204ENST00000397760 ALKAL1Q6UXT8 129 aa20.74■□□□□ 0.91
PDLIM2-204ENST00000397760 NT5DC4Q86YG4 428 aa20.74■□□□□ 0.91
PDLIM2-204ENST00000397760 PPM1KQ8N3J5 372 aa20.74■□□□□ 0.91
PDLIM2-204ENST00000397760 TXLNBQ8N3L3 684 aa20.74■□□□□ 0.91
PDLIM2-204ENST00000397760 TATDN2Q93075 761 aa20.74■□□□□ 0.91
PDLIM2-204ENST00000397760 TMEM106CQ9BVX2 250 aa20.74■□□□□ 0.91
PDLIM2-204ENST00000397760 AIPL1Q9NZN9 384 aa20.74■□□□□ 0.91
PDLIM2-204ENST00000397760 KIF5AQ12840 1032 aa20.74■□□□□ 0.91
PDLIM2-204ENST00000397760 TRPC3Q13507 836 aa20.74■□□□□ 0.91
PDLIM2-204ENST00000397760 SPA17Q15506 151 aa20.74■□□□□ 0.91
PDLIM2-204ENST00000397760 TRIM60Q495X7 471 aa20.74■□□□□ 0.91
PDLIM2-204ENST00000397760 C1orf53Q5VUE5 145 aa20.74■□□□□ 0.91
PDLIM2-204ENST00000397760 HELQQ8TDG4 1101 aa20.74■□□□□ 0.91
PDLIM2-204ENST00000397760 TOX2Q96NM4 488 aa20.74■□□□□ 0.91
PDLIM2-204ENST00000397760 CXCL16Q9H2A7 254 aa20.74■□□□□ 0.91
PDLIM2-204ENST00000397760 ACBD3Q9H3P7 528 aa20.74■□□□□ 0.91
PDLIM2-204ENST00000397760 C1orf112Q9NSG2 853 aa20.74■□□□□ 0.91
PDLIM2-204ENST00000397760 DERAQ9Y315 318 aa20.74■□□□□ 0.91
PDLIM2-204ENST00000397760 F8VZ95 297 aa20.73■□□□□ 0.91
PDLIM2-204ENST00000397760 PITPNM1O00562 1244 aa20.73■□□□□ 0.91
PDLIM2-204ENST00000397760 STAT1P42224 750 aa20.73■□□□□ 0.91
PDLIM2-204ENST00000397760 MFAP3P55082 362 aa20.73■□□□□ 0.91
PDLIM2-204ENST00000397760 ARID5AQ03989 594 aa20.73■□□□□ 0.91
PDLIM2-204ENST00000397760 TLE2Q04725 743 aa20.73■□□□□ 0.91
PDLIM2-204ENST00000397760 ASIC2Q16515 512 aa20.73■□□□□ 0.91
PDLIM2-204ENST00000397760 C1orf127Q8N9H9 656 aa20.73■□□□□ 0.91
PDLIM2-204ENST00000397760 KAT5Q92993 513 aa20.73■□□□□ 0.91
PDLIM2-204ENST00000397760 PAWRQ96IZ0 340 aaKnown RBP20.73■□□□□ 0.91
PDLIM2-204ENST00000397760 CCDC42Q96M95 316 aa20.73■□□□□ 0.91
PDLIM2-204ENST00000397760 ZMAT2Q96NC0 199 aaKnown RBP20.73■□□□□ 0.91
PDLIM2-204ENST00000397760 ADAM2Q99965 735 aa20.73■□□□□ 0.91
PDLIM2-204ENST00000397760 IFIH1Q9BYX4 1025 aaKnown RBP20.73■□□□□ 0.91
PDLIM2-204ENST00000397760 IMPG2Q9BZV3 1241 aa20.73■□□□□ 0.91
PDLIM2-204ENST00000397760 C11orf49Q9H6J7 331 aa20.73■□□□□ 0.91
PDLIM2-204ENST00000397760 KLK14Q9P0G3 267 aa20.73■□□□□ 0.91
PDLIM2-204ENST00000397760 CNTN3Q9P232 1028 aa20.73■□□□□ 0.91
PDLIM2-204ENST00000397760 PRLRP16471 622 aa20.72■□□□□ 0.91
PDLIM2-204ENST00000397760 MYL6P60660 151 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms