RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 MFAP3P55082 362 aa22.78■■□□□ 1.24
CPNE1-204ENST00000397443 WDR59Q6PJI9 974 aa22.78■■□□□ 1.24
CPNE1-204ENST00000397443 PPP1R10Q96QC0 940 aaKnown RBP22.78■■□□□ 1.24
CPNE1-204ENST00000397443 CHP1Q99653 195 aa22.78■■□□□ 1.24
CPNE1-204ENST00000397443 XYLT2Q9H1B5 865 aa22.78■■□□□ 1.24
CPNE1-204ENST00000397443 SOWAHDA6NJG2 315 aa22.77■■□□□ 1.24
CPNE1-204ENST00000397443 F8VZ95 297 aa22.77■■□□□ 1.24
CPNE1-204ENST00000397443 FOXN3O00409 490 aaPredicted RBP22.77■■□□□ 1.24
CPNE1-204ENST00000397443 ZC3H11AO75152 810 aaKnown RBP eCLIP22.77■■□□□ 1.24
CPNE1-204ENST00000397443 GFPT2O94808 682 aa22.77■■□□□ 1.24
CPNE1-204ENST00000397443 THP07101 528 aa22.77■■□□□ 1.24
CPNE1-204ENST00000397443 JAM2P57087 298 aa22.77■■□□□ 1.24
CPNE1-204ENST00000397443 RBP5P82980 135 aa22.77■■□□□ 1.24
CPNE1-204ENST00000397443 WDR72Q3MJ13 1102 aa22.77■■□□□ 1.24
CPNE1-204ENST00000397443 TMEM139Q8IV31 216 aa22.77■■□□□ 1.24
CPNE1-204ENST00000397443 C7orf61Q8IZ16 206 aa22.77■■□□□ 1.24
CPNE1-204ENST00000397443 RABGGTAQ92696 567 aa22.77■■□□□ 1.24
CPNE1-204ENST00000397443 HPDLQ96IR7 371 aa22.77■■□□□ 1.24
CPNE1-204ENST00000397443 GPR88Q9GZN0 384 aa22.77■■□□□ 1.24
CPNE1-204ENST00000397443 PRKAG2Q9UGJ0 569 aa22.77■■□□□ 1.24
CPNE1-204ENST00000397443 POLIQ9UNA4 740 aa22.77■■□□□ 1.24
CPNE1-204ENST00000397443 ALPK3Q96L96 1907 aa22.77■■□□□ 1.24
CPNE1-204ENST00000397443 SCN1AP35498 2009 aa22.77■■□□□ 1.23
CPNE1-204ENST00000397443 ACRP10323 421 aa22.76■■□□□ 1.23
CPNE1-204ENST00000397443 FAM189BP81408 668 aa22.76■■□□□ 1.23
CPNE1-204ENST00000397443 VWCEQ96DN2 955 aa22.76■■□□□ 1.23
CPNE1-204ENST00000397443 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.76■■□□□ 1.23
CPNE1-204ENST00000397443 XPOTO43592 962 aaKnown RBP22.76■■□□□ 1.23
CPNE1-204ENST00000397443 NRDCO43847 1150 aa22.76■■□□□ 1.23
CPNE1-204ENST00000397443 EOMESO95936 686 aa22.76■■□□□ 1.23
CPNE1-204ENST00000397443 PLEKP08567 350 aaPredicted RBP22.76■■□□□ 1.23
CPNE1-204ENST00000397443 RFX1P22670 979 aa22.76■■□□□ 1.23
CPNE1-204ENST00000397443 CUL2Q13617 745 aa22.76■■□□□ 1.23
CPNE1-204ENST00000397443 ASIC2Q16515 512 aa22.76■■□□□ 1.23
CPNE1-204ENST00000397443 CLLU1OSQ5K130 101 aa22.76■■□□□ 1.23
CPNE1-204ENST00000397443 C9orf57Q5W0N0 161 aa22.76■■□□□ 1.23
CPNE1-204ENST00000397443 LRFN2Q9ULH4 789 aa22.76■■□□□ 1.23
CPNE1-204ENST00000397443 PYCARDQ9ULZ3 195 aa22.76■■□□□ 1.23
CPNE1-204ENST00000397443 PCDHB7Q9Y5E2 793 aa22.76■■□□□ 1.23
CPNE1-204ENST00000397443 OFD1O75665 1012 aa22.75■■□□□ 1.23
CPNE1-204ENST00000397443 STAT1P42224 750 aa22.75■■□□□ 1.23
CPNE1-204ENST00000397443 IKBKEQ14164 716 aa22.75■■□□□ 1.23
CPNE1-204ENST00000397443 MTF1Q14872 753 aa22.75■■□□□ 1.23
CPNE1-204ENST00000397443 HS1BP3Q53T59 392 aa22.75■■□□□ 1.23
CPNE1-204ENST00000397443 TDRD12Q587J7 1177 aaKnown RBP22.75■■□□□ 1.23
CPNE1-204ENST00000397443 ZNF667Q5HYK9 610 aa22.75■■□□□ 1.23
CPNE1-204ENST00000397443 MFSD5Q6N075 450 aa22.75■■□□□ 1.23
CPNE1-204ENST00000397443 GLB1LQ6UWU2 654 aa22.75■■□□□ 1.23
CPNE1-204ENST00000397443 TMEM199Q8N511 208 aa22.75■■□□□ 1.23
CPNE1-204ENST00000397443 CCDC112Q8NEF3 446 aa22.75■■□□□ 1.23
CPNE1-204ENST00000397443 UBN1Q9NPG3 1134 aa22.75■■□□□ 1.23
CPNE1-204ENST00000397443 CASTOR2A6NHX0 329 aa22.74■■□□□ 1.23
CPNE1-204ENST00000397443 KRT5P13647 590 aa22.74■■□□□ 1.23
CPNE1-204ENST00000397443 CD58P19256 250 aa22.74■■□□□ 1.23
CPNE1-204ENST00000397443 RFC2P35250 354 aa22.74■■□□□ 1.23
CPNE1-204ENST00000397443 SOX5P35711 763 aa22.74■■□□□ 1.23
CPNE1-204ENST00000397443 GATMP50440 423 aa22.74■■□□□ 1.23
CPNE1-204ENST00000397443 GCNT1Q02742 428 aa22.74■■□□□ 1.23
CPNE1-204ENST00000397443 CNKSR3Q6P9H4 555 aa22.74■■□□□ 1.23
CPNE1-204ENST00000397443 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.74■■□□□ 1.231e-8■■□□□ 11.7
CPNE1-204ENST00000397443 NIF3L1Q9GZT8 377 aa22.74■■□□□ 1.23
CPNE1-204ENST00000397443 NUCKS1Q9H1E3 243 aaKnown RBP22.74■■□□□ 1.23
CPNE1-204ENST00000397443 TMEM161AQ9NX61 479 aa22.74■■□□□ 1.23
CPNE1-204ENST00000397443 UPP2O95045 317 aa22.74■■□□□ 1.23
CPNE1-204ENST00000397443 WEE2P0C1S8 567 aa22.74■■□□□ 1.23
CPNE1-204ENST00000397443 RAP1GAPP47736 663 aa22.74■■□□□ 1.23
CPNE1-204ENST00000397443 CYP26C1Q6V0L0 522 aa22.74■■□□□ 1.23
CPNE1-204ENST00000397443 SLC38A7Q9NVC3 462 aa22.74■■□□□ 1.23
CPNE1-204ENST00000397443 TDRD15B5MCY1 1934 aaKnown RBP22.73■■□□□ 1.23
CPNE1-204ENST00000397443 TTC3P53804 2025 aa22.73■■□□□ 1.23
CPNE1-204ENST00000397443 MICAL3Q7RTP6 2002 aa22.73■■□□□ 1.23
CPNE1-204ENST00000397443 CCDC85CA6NKD9 419 aa22.73■■□□□ 1.23
CPNE1-204ENST00000397443 EVI5O60447 810 aa22.73■■□□□ 1.23
CPNE1-204ENST00000397443 SYN1P17600 705 aa22.73■■□□□ 1.23
CPNE1-204ENST00000397443 MYO1EQ12965 1108 aa22.73■■□□□ 1.23
CPNE1-204ENST00000397443 NAB2Q15742 525 aa22.73■■□□□ 1.23
CPNE1-204ENST00000397443 ABHD8Q96I13 439 aa22.73■■□□□ 1.23
CPNE1-204ENST00000397443 MMS19Q96T76 1030 aa22.73■■□□□ 1.23
CPNE1-204ENST00000397443 CYP3A5P20815 502 aa22.72■■□□□ 1.23
CPNE1-204ENST00000397443 IGFBP6P24592 240 aaPredicted RBP22.72■■□□□ 1.23
CPNE1-204ENST00000397443 ATICP31939 592 aa22.72■■□□□ 1.23
CPNE1-204ENST00000397443 ASPAP45381 313 aa22.72■■□□□ 1.23
CPNE1-204ENST00000397443 KLHL30Q0D2K2 578 aa22.72■■□□□ 1.23
CPNE1-204ENST00000397443 MEA1Q16626 185 aa22.72■■□□□ 1.23
CPNE1-204ENST00000397443 ABI1Q8IZP0 508 aa22.72■■□□□ 1.23
CPNE1-204ENST00000397443 TAF4BQ92750 862 aa22.72■■□□□ 1.23
CPNE1-204ENST00000397443 TSPAN18Q96SJ8 248 aa22.72■■□□□ 1.23
CPNE1-204ENST00000397443 PAAF1Q9BRP4 392 aa22.72■■□□□ 1.23
CPNE1-204ENST00000397443 ACP6Q9NPH0 428 aa22.72■■□□□ 1.23
CPNE1-204ENST00000397443 AIPL1Q9NZN9 384 aa22.72■■□□□ 1.23
CPNE1-204ENST00000397443 ARHGAP20Q9P2F6 1191 aa22.72■■□□□ 1.23
CPNE1-204ENST00000397443 MYO6Q9UM54 1294 aa22.72■■□□□ 1.23
CPNE1-204ENST00000397443 TBXAS1P24557 533 aaPredicted RBP22.72■■□□□ 1.23
CPNE1-204ENST00000397443 HNRNPH3P31942 346 aaKnown RBP22.72■■□□□ 1.23
CPNE1-204ENST00000397443 CLCNKBP51801 687 aa22.72■■□□□ 1.23
CPNE1-204ENST00000397443 CDH8P55286 799 aa22.72■■□□□ 1.23
CPNE1-204ENST00000397443 NOMO2Q5JPE7 1267 aa22.72■■□□□ 1.23
CPNE1-204ENST00000397443 RAD9BQ6WBX8 426 aa22.72■■□□□ 1.23
CPNE1-204ENST00000397443 IRF2BP2Q7Z5L9 587 aa22.72■■□□□ 1.23
CPNE1-204ENST00000397443 TMTC1Q8IUR5 882 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms