RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 TRIM65Q6PJ69 517 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.63□□□□□ -0.71
DDX39B-202ENST00000396172 DRC7Q8IY82 874 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 CMTR2Q8IYT2 770 aaKnown RBP10.63□□□□□ -0.71
DDX39B-202ENST00000396172 CRIPAKQ8N1N5 446 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 ZNF516Q92618 1163 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 NT5C1BQ96P26 610 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 INTS2Q9H0H0 1204 aaKnown RBP10.63□□□□□ -0.71
DDX39B-202ENST00000396172 FAM124BQ9H5Z6 455 aaPredicted RBP10.63□□□□□ -0.71
DDX39B-202ENST00000396172 TUBGCP4Q9UGJ1 667 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 FBXL5Q9UKA1 691 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 SLC4A7Q9Y6M7 1214 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 TBKBP1A7MCY6 615 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 TEX33O43247 280 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 AP5Z1O43299 807 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 DGKIO75912 1065 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 POMCP01189 267 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 TBXAS1P24557 533 aaPredicted RBP10.63□□□□□ -0.71
DDX39B-202ENST00000396172 POLR2BP30876 1174 aaKnown RBP10.63□□□□□ -0.71
DDX39B-202ENST00000396172 YWHAEP62258 255 aaKnown RBP10.63□□□□□ -0.71
DDX39B-202ENST00000396172 SV2CQ496J9 727 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 ENOSF1Q7L5Y1 443 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 EHBP1Q8NDI1 1231 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 GSTCDQ8NEC7 633 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 TAS1R2Q8TE23 839 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 CASD1Q96PB1 797 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 ARID3AQ99856 593 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 TMEM175Q9BSA9 504 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 LSM14BQ9BX40 385 aaKnown RBP10.63□□□□□ -0.71
DDX39B-202ENST00000396172 EDEM3Q9BZQ6 932 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 VRTNQ9H8Y1 702 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 SPTLC3Q9NUV7 552 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 RNF19AQ9NV58 838 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 TBC1D13Q9NVG8 400 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 APEX2Q9UBZ4 518 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 PRDM4Q9UKN5 801 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 SIK3Q9Y2K2 1263 aa10.63□□□□□ -0.71
DDX39B-202ENST00000396172 MKI67P46013 3256 aaKnown RBP10.62□□□□□ -0.71
DDX39B-202ENST00000396172 UPP2O95045 317 aa10.62□□□□□ -0.71
DDX39B-202ENST00000396172 ASS1P00966 412 aaKnown RBP10.62□□□□□ -0.71
DDX39B-202ENST00000396172 PON1P27169 355 aa10.62□□□□□ -0.71
DDX39B-202ENST00000396172 MAGEA10P43363 369 aaPredicted RBP10.62□□□□□ -0.71
DDX39B-202ENST00000396172 TAF6P49848 677 aa10.62□□□□□ -0.71
DDX39B-202ENST00000396172 NOP14P78316 857 aaKnown RBP10.62□□□□□ -0.71
DDX39B-202ENST00000396172 DEFB103AP81534 67 aa10.62□□□□□ -0.71
DDX39B-202ENST00000396172 C9orf57Q5W0N0 161 aa10.62□□□□□ -0.71
DDX39B-202ENST00000396172 C16orf59Q7L2K0 433 aa10.62□□□□□ -0.71
DDX39B-202ENST00000396172 PPFIBP1Q86W92 1011 aa10.62□□□□□ -0.71
DDX39B-202ENST00000396172 TTC39CQ8N584 583 aa10.62□□□□□ -0.71
DDX39B-202ENST00000396172 ZNF397Q8NF99 534 aaPredicted RBP10.62□□□□□ -0.71
DDX39B-202ENST00000396172 TSC1Q92574 1164 aa10.62□□□□□ -0.71
DDX39B-202ENST00000396172 C18orf25Q96B23 403 aaPredicted RBP10.62□□□□□ -0.71
DDX39B-202ENST00000396172 YME1L1Q96TA2 773 aa10.62□□□□□ -0.71
DDX39B-202ENST00000396172 CRACR2AQ9BSW2 395 aa10.62□□□□□ -0.71
DDX39B-202ENST00000396172 DNAI2Q9GZS0 605 aa10.62□□□□□ -0.71
DDX39B-202ENST00000396172 IMPACTQ9P2X3 320 aa10.62□□□□□ -0.71
DDX39B-202ENST00000396172 AGAP1Q9UPQ3 857 aa10.62□□□□□ -0.71
DDX39B-202ENST00000396172 PLXNA4Q9HCM2 1894 aa10.62□□□□□ -0.71
DDX39B-202ENST00000396172 ANO9A1A5B4 782 aa10.61□□□□□ -0.71
DDX39B-202ENST00000396172 PODXLO00592 558 aa10.61□□□□□ -0.71
DDX39B-202ENST00000396172 GJB5O95377 273 aa10.61□□□□□ -0.71
DDX39B-202ENST00000396172 VNN1O95497 513 aa10.61□□□□□ -0.71
DDX39B-202ENST00000396172 RGS19P49795 217 aa10.61□□□□□ -0.71
DDX39B-202ENST00000396172 TNNC1P63316 161 aa10.61□□□□□ -0.71
DDX39B-202ENST00000396172 GCNT1Q02742 428 aa10.61□□□□□ -0.71
DDX39B-202ENST00000396172 DSC1Q08554 894 aa10.61□□□□□ -0.71
DDX39B-202ENST00000396172 NAB2Q15742 525 aa10.61□□□□□ -0.71
DDX39B-202ENST00000396172 ZNF667Q5HYK9 610 aa10.61□□□□□ -0.71
DDX39B-202ENST00000396172 CACNA2D4Q7Z3S7 1137 aa10.61□□□□□ -0.71
DDX39B-202ENST00000396172 TMC6Q7Z403 805 aa10.61□□□□□ -0.71
DDX39B-202ENST00000396172 JAKMIP2Q96AA8 810 aa10.61□□□□□ -0.71
DDX39B-202ENST00000396172 HPDLQ96IR7 371 aa10.61□□□□□ -0.71
DDX39B-202ENST00000396172 ZBED2Q9BTP6 218 aa10.61□□□□□ -0.71
DDX39B-202ENST00000396172 NUCKS1Q9H1E3 243 aaKnown RBP10.61□□□□□ -0.71
DDX39B-202ENST00000396172 CEP72Q9P209 647 aa10.61□□□□□ -0.71
DDX39B-202ENST00000396172 SIX4Q9UIU6 781 aa10.61□□□□□ -0.71
DDX39B-202ENST00000396172 INSL6Q9Y581 213 aa10.61□□□□□ -0.71
DDX39B-202ENST00000396172 A0A1W2PQJ5 194 aa10.61□□□□□ -0.71
DDX39B-202ENST00000396172 TMEM189-UBE2V1I3L0A0 370 aa10.61□□□□□ -0.71
DDX39B-202ENST00000396172 ATP2A2P16615 1042 aaKnown RBP10.61□□□□□ -0.71
DDX39B-202ENST00000396172 MFAP3P55082 362 aa10.61□□□□□ -0.71
DDX39B-202ENST00000396172 KCNMA1Q12791 1236 aa10.61□□□□□ -0.71
DDX39B-202ENST00000396172 DNTTIP2Q5QJE6 756 aaKnown RBP10.61□□□□□ -0.71
DDX39B-202ENST00000396172 CNGA4Q8IV77 575 aa10.61□□□□□ -0.71
DDX39B-202ENST00000396172 LMO3Q8TAP4 145 aa10.61□□□□□ -0.71
DDX39B-202ENST00000396172 ZNF689Q96CS4 500 aaPredicted RBP10.61□□□□□ -0.71
DDX39B-202ENST00000396172 RNPC3Q96LT9 517 aaKnown RBP10.61□□□□□ -0.71
DDX39B-202ENST00000396172 NIF3L1Q9GZT8 377 aa10.61□□□□□ -0.71
DDX39B-202ENST00000396172 KCNF1Q9H3M0 494 aa10.61□□□□□ -0.71
DDX39B-202ENST00000396172 RC3H2Q9HBD1 1191 aaKnown RBP10.61□□□□□ -0.71
DDX39B-202ENST00000396172 AAASQ9NRG9 546 aa10.61□□□□□ -0.71
DDX39B-202ENST00000396172 FAM207AQ9NSI2 230 aaPredicted RBP10.61□□□□□ -0.71
DDX39B-202ENST00000396172 MIOSQ9NXC5 875 aa10.61□□□□□ -0.71
DDX39B-202ENST00000396172 MYO6Q9UM54 1294 aa10.61□□□□□ -0.71
DDX39B-202ENST00000396172 PLAGL2Q9UPG8 496 aa10.61□□□□□ -0.71
DDX39B-202ENST00000396172 PTPRDP23468 1912 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 PIRO00625 290 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 TRAPPC3O43617 180 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 LAG3P18627 525 aa10.6□□□□□ -0.71
DDX39B-202ENST00000396172 SLC9A1P19634 815 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms