RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 ZNF410Q86VK4 478 aa12.4□□□□□ -0.42
RTN1-203ENST00000395090 FAM186BQ8IYM0 893 aa12.4□□□□□ -0.42
RTN1-203ENST00000395090 NME8Q8N427 588 aa12.4□□□□□ -0.42
RTN1-203ENST00000395090 SPC24Q8NBT2 197 aa12.4□□□□□ -0.42
RTN1-203ENST00000395090 NLRP4Q96MN2 994 aa12.4□□□□□ -0.42
RTN1-203ENST00000395090 ERGIC2Q96RQ1 377 aa12.4□□□□□ -0.42
RTN1-203ENST00000395090 ADAMTS10Q9H324 1103 aa12.4□□□□□ -0.42
RTN1-203ENST00000395090 AKT3Q9Y243 479 aa12.4□□□□□ -0.42
RTN1-203ENST00000395090 GRIN2DO15399 1336 aa12.4□□□□□ -0.42
RTN1-203ENST00000395090 A0A087WZ62 844 aa12.4□□□□□ -0.42
RTN1-203ENST00000395090 A0A0B4J269 797 aa12.4□□□□□ -0.42
RTN1-203ENST00000395090 GOLGA6L6A8MZA4 724 aa12.4□□□□□ -0.42
RTN1-203ENST00000395090 GPR32O75388 356 aa12.4□□□□□ -0.42
RTN1-203ENST00000395090 VTNP04004 478 aa12.4□□□□□ -0.42
RTN1-203ENST00000395090 EDN1P05305 212 aa12.4□□□□□ -0.42
RTN1-203ENST00000395090 IQCF3P0C7M6 154 aa12.4□□□□□ -0.42
RTN1-203ENST00000395090 CYP2C9P11712 490 aa12.4□□□□□ -0.42
RTN1-203ENST00000395090 NFKB1P19838 968 aa12.4□□□□□ -0.42
RTN1-203ENST00000395090 NLRP11P59045 1033 aaKnown RBP12.4□□□□□ -0.42
RTN1-203ENST00000395090 CTBSQ01459 385 aa12.4□□□□□ -0.42
RTN1-203ENST00000395090 ENPEPQ07075 957 aa12.4□□□□□ -0.42
RTN1-203ENST00000395090 CEP135Q66GS9 1140 aa12.4□□□□□ -0.42
RTN1-203ENST00000395090 ARMCX5Q6P1M9 558 aa12.4□□□□□ -0.42
RTN1-203ENST00000395090 TSHZ1Q6ZSZ6 1077 aa12.4□□□□□ -0.42
RTN1-203ENST00000395090 BHMTQ93088 406 aa12.4□□□□□ -0.42
RTN1-203ENST00000395090 ACO2Q99798 780 aaKnown RBP12.4□□□□□ -0.42
RTN1-203ENST00000395090 FDXACB1Q9BRP7 624 aaPredicted RBP12.4□□□□□ -0.42
RTN1-203ENST00000395090 TARS2Q9BW92 718 aaKnown RBP12.4□□□□□ -0.42
RTN1-203ENST00000395090 MRPL4Q9BYD3 311 aaKnown RBP12.4□□□□□ -0.42
RTN1-203ENST00000395090 PCIF1Q9H4Z3 704 aa12.4□□□□□ -0.42
RTN1-203ENST00000395090 MINDY3Q9H8M7 445 aa12.4□□□□□ -0.42
RTN1-203ENST00000395090 PTPRHQ9HD43 1115 aa12.4□□□□□ -0.42
RTN1-203ENST00000395090 ZFATQ9P243 1243 aa12.4□□□□□ -0.42
RTN1-203ENST00000395090 GTF2IRD1Q9UHL9 959 aa12.4□□□□□ -0.42
RTN1-203ENST00000395090 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.4□□□□□ -0.42
RTN1-203ENST00000395090 TOM1L1O75674 476 aa12.39□□□□□ -0.43
RTN1-203ENST00000395090 PROZP22891 400 aa12.39□□□□□ -0.43
RTN1-203ENST00000395090 LIG4P49917 911 aa12.39□□□□□ -0.43
RTN1-203ENST00000395090 ACLYP53396 1101 aa12.39□□□□□ -0.43
RTN1-203ENST00000395090 CHMP4BP1P59074 171 aa12.39□□□□□ -0.43
RTN1-203ENST00000395090 ZNF200P98182 395 aaPredicted RBP12.39□□□□□ -0.43
RTN1-203ENST00000395090 TAF2Q6P1X5 1199 aa12.39□□□□□ -0.43
RTN1-203ENST00000395090 RUFY4Q6ZNE9 571 aa12.39□□□□□ -0.43
RTN1-203ENST00000395090 INTS8Q75QN2 995 aaKnown RBP12.39□□□□□ -0.43
RTN1-203ENST00000395090 CCDC186Q7Z3E2 898 aa12.39□□□□□ -0.43
RTN1-203ENST00000395090 TMC6Q7Z403 805 aa12.39□□□□□ -0.43
RTN1-203ENST00000395090 SRGAP1Q7Z6B7 1085 aa12.39□□□□□ -0.43
RTN1-203ENST00000395090 RAB44Q7Z6P3 723 aaPredicted RBP12.39□□□□□ -0.43
RTN1-203ENST00000395090 RPAINQ86UA6 219 aa12.39□□□□□ -0.43
RTN1-203ENST00000395090 C1orf127Q8N9H9 656 aa12.39□□□□□ -0.43
RTN1-203ENST00000395090 ARRDC4Q8NCT1 418 aa12.39□□□□□ -0.43
RTN1-203ENST00000395090 SH3TC2Q8TF17 1288 aa12.39□□□□□ -0.43
RTN1-203ENST00000395090 PPP1R13LQ8WUF5 828 aa12.39□□□□□ -0.43
RTN1-203ENST00000395090 SLC35C1Q96A29 364 aa12.39□□□□□ -0.43
RTN1-203ENST00000395090 BICD1Q96G01 975 aa12.39□□□□□ -0.43
RTN1-203ENST00000395090 HAPLN2Q9GZV7 340 aa12.39□□□□□ -0.43
RTN1-203ENST00000395090 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.39□□□□□ -0.43
RTN1-203ENST00000395090 KIAA1586Q9HCI6 787 aa12.39□□□□□ -0.43
RTN1-203ENST00000395090 PAK6Q9NQU5 681 aaPredicted RBP12.39□□□□□ -0.43
RTN1-203ENST00000395090 PRMT7Q9NVM4 692 aaPredicted RBP12.39□□□□□ -0.43
RTN1-203ENST00000395090 CNTN3Q9P232 1028 aa12.39□□□□□ -0.43
RTN1-203ENST00000395090 SIP14410 1827 aa12.39□□□□□ -0.43
RTN1-203ENST00000395090 H3BM21 787 aa12.38□□□□□ -0.43
RTN1-203ENST00000395090 ABLIM1O14639 778 aa12.38□□□□□ -0.43
RTN1-203ENST00000395090 PRKCBP05771 671 aa12.38□□□□□ -0.43
RTN1-203ENST00000395090 GSDMDP57764 484 aa12.38□□□□□ -0.43
RTN1-203ENST00000395090 PTPN11Q06124 597 aaPredicted RBP12.38□□□□□ -0.43
RTN1-203ENST00000395090 HSP90AA2PQ14568 343 aaPredicted RBP12.38□□□□□ -0.43
RTN1-203ENST00000395090 PCBP1Q15365 356 aaKnown RBP eCLIP12.38□□□□□ -0.43
RTN1-203ENST00000395090 PTPN21Q16825 1174 aa12.38□□□□□ -0.43
RTN1-203ENST00000395090 FKBP15Q5T1M5 1219 aa12.38□□□□□ -0.43
RTN1-203ENST00000395090 GDF6Q6KF10 455 aaPredicted RBP12.38□□□□□ -0.43
RTN1-203ENST00000395090 ZSWIM2Q8NEG5 633 aa12.38□□□□□ -0.43
RTN1-203ENST00000395090 FBF1Q8TES7 1133 aa12.38□□□□□ -0.43
RTN1-203ENST00000395090 POMGNT1Q8WZA1 660 aa12.38□□□□□ -0.43
RTN1-203ENST00000395090 PMEPA1Q969W9 287 aa12.38□□□□□ -0.43
RTN1-203ENST00000395090 ZBTB45Q96K62 511 aaPredicted RBP12.38□□□□□ -0.43
RTN1-203ENST00000395090 MFSD14AQ96MC6 490 aa12.38□□□□□ -0.43
RTN1-203ENST00000395090 CHRDQ9H2X0 955 aa12.38□□□□□ -0.43
RTN1-203ENST00000395090 CEP350Q5VT06 3117 aa12.38□□□□□ -0.43
RTN1-203ENST00000395090 CENPFP49454 3210 aa12.37□□□□□ -0.43
RTN1-203ENST00000395090 INO80B-WBP1J3KQ70 363 aa12.37□□□□□ -0.43
RTN1-203ENST00000395090 EXTL3O43909 919 aa12.37□□□□□ -0.43
RTN1-203ENST00000395090 MMP20O60882 483 aa12.37□□□□□ -0.43
RTN1-203ENST00000395090 LDHAP00338 332 aaKnown RBP12.37□□□□□ -0.43
RTN1-203ENST00000395090 RPLP2P05387 115 aaKnown RBP12.37□□□□□ -0.43
RTN1-203ENST00000395090 PTMAP06454 111 aaKnown RBP12.37□□□□□ -0.43
RTN1-203ENST00000395090 MCL1Q07820 350 aa12.37□□□□□ -0.43
RTN1-203ENST00000395090 BFSP1Q12934 665 aa12.37□□□□□ -0.43
RTN1-203ENST00000395090 PRPF4BQ13523 1007 aaKnown RBP12.37□□□□□ -0.43
RTN1-203ENST00000395090 ITGA7Q13683 1181 aa12.37□□□□□ -0.43
RTN1-203ENST00000395090 SNRNP35Q16560 246 aaKnown RBP12.37□□□□□ -0.43
RTN1-203ENST00000395090 SERINC5Q86VE9 423 aa12.37□□□□□ -0.43
RTN1-203ENST00000395090 GPD1LQ8N335 351 aa12.37□□□□□ -0.43
RTN1-203ENST00000395090 SLC43A3Q8NBI5 491 aa12.37□□□□□ -0.43
RTN1-203ENST00000395090 DNAJB3Q8WWF6 145 aa12.37□□□□□ -0.43
RTN1-203ENST00000395090 ZNF668Q96K58 619 aaPredicted RBP12.37□□□□□ -0.43
RTN1-203ENST00000395090 INO80BQ9C086 356 aaPredicted RBP12.37□□□□□ -0.43
RTN1-203ENST00000395090 TNFSF13BQ9Y275 285 aa12.37□□□□□ -0.43
RTN1-203ENST00000395090 SIK3Q9Y2K2 1263 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms