RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 GYS2P54840 703 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 TMED1Q13445 227 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 LAMC2Q13753 1193 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 MMS22LQ6ZRQ5 1243 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 STOX1Q6ZVD7 989 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 SCFD2Q8WU76 684 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 TRIM9Q9C026 710 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 CCDC90BQ9GZT6 254 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 RUBCNLQ9H714 662 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 ARHGEF38Q9NXL2 777 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 FGFR4P22455 802 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 HARS2P49590 506 aaKnown RBP10.92□□□□□ -0.66
COL4A6-203ENST00000394872 ATL2Q8NHH9 583 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 SLC35G2Q8TBE7 412 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 CATSPERBQ9H7T0 1116 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.92□□□□□ -0.66
COL4A6-203ENST00000394872 APRTP07741 180 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 ACADSBP45954 432 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 TWF1Q12792 350 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 LRRC14Q15048 493 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 ARL8AQ96BM9 186 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 CCSER1Q9C0I3 900 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 CYP4F11Q9HBI6 524 aa10.92□□□□□ -0.66
COL4A6-203ENST00000394872 CDV3Q9UKY7 258 aaKnown RBP10.92□□□□□ -0.66
COL4A6-203ENST00000394872 SLC26A4O43511 780 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 GTF2A2P52657 109 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 PIGHQ14442 188 aaPredicted RBP10.91□□□□□ -0.66
COL4A6-203ENST00000394872 MAPRE2Q15555 327 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 KIZQ2M2Z5 673 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 RFWD2Q8NHY2 731 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 C7orf25Q9BPX7 421 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 PRMT7Q9NVM4 692 aaPredicted RBP10.91□□□□□ -0.66
COL4A6-203ENST00000394872 GTPBP10A4D1E9 387 aaKnown RBP10.91□□□□□ -0.66
COL4A6-203ENST00000394872 SLC25A41Q8N5S1 370 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 ABHD8Q96I13 439 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 TMEM117Q9H0C3 514 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 PDS5AQ29RF7 1337 aaKnown RBP10.91□□□□□ -0.66
COL4A6-203ENST00000394872 MEFVO15553 781 aaPredicted RBP10.91□□□□□ -0.66
COL4A6-203ENST00000394872 ARIH2O95376 493 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 ZBTB17Q13105 803 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 UBA3Q8TBC4 463 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 NOP53Q9NZM5 478 aaKnown RBP10.91□□□□□ -0.66
COL4A6-203ENST00000394872 ATP1A1P05023 1023 aaKnown RBP10.91□□□□□ -0.66
COL4A6-203ENST00000394872 RALBP11234 206 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 HLA-DPA1P20036 260 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 RASA1P20936 1047 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 THPOP40225 353 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 AP2B1P63010 937 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 LAMB3Q13751 1172 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 ZC2HC1CQ53FD0 456 aaPredicted RBP10.91□□□□□ -0.66
COL4A6-203ENST00000394872 C10orf120Q5SQS8 335 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 PTPRN2Q92932 1015 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 ATG4CQ96DT6 458 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 TSPAN17Q96FV3 270 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 FAM161BQ96MY7 647 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 AAASQ9NRG9 546 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 NDE1Q9NXR1 346 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 ADGRG1Q9Y653 693 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 LRRC7Q96NW7 1537 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 FAM205CA6NFA0 338 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 TCF7P36402 384 aaPredicted RBP10.91□□□□□ -0.66
COL4A6-203ENST00000394872 EXOSC10Q01780 885 aaKnown RBP10.91□□□□□ -0.66
COL4A6-203ENST00000394872 SNX31Q8N9S9 440 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 IGDCC4Q8TDY8 1250 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 GLT1D1Q96MS3 346 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 DACH2Q96NX9 599 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 PKP3Q9Y446 797 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 C1orf167Q5SNV9 1468 aa10.91□□□□□ -0.66
COL4A6-203ENST00000394872 EXTL3O43909 919 aa10.9□□□□□ -0.66
COL4A6-203ENST00000394872 ETFBP38117 255 aa10.9□□□□□ -0.66
COL4A6-203ENST00000394872 ALDH7A1P49419 539 aaKnown RBP10.9□□□□□ -0.66
COL4A6-203ENST00000394872 OCA2Q04671 838 aa10.9□□□□□ -0.66
COL4A6-203ENST00000394872 P3H1Q32P28 736 aa10.9□□□□□ -0.66
COL4A6-203ENST00000394872 TDRD10Q5VZ19 366 aaKnown RBP10.9□□□□□ -0.66
COL4A6-203ENST00000394872 OR9Q1Q8NGQ5 310 aa10.9□□□□□ -0.66
COL4A6-203ENST00000394872 XPO7Q9UIA9 1087 aaKnown RBP10.9□□□□□ -0.66
COL4A6-203ENST00000394872 GMNCA6NCL1 334 aa10.9□□□□□ -0.66
COL4A6-203ENST00000394872 RGS2P41220 211 aa10.9□□□□□ -0.66
COL4A6-203ENST00000394872 DCAF6Q58WW2 860 aa10.9□□□□□ -0.66
COL4A6-203ENST00000394872 SYDE1Q6ZW31 735 aaPredicted RBP10.9□□□□□ -0.66
COL4A6-203ENST00000394872 ARHGEF26Q96DR7 871 aa10.9□□□□□ -0.66
COL4A6-203ENST00000394872 ECT2Q9H8V3 914 aa10.9□□□□□ -0.66
COL4A6-203ENST00000394872 LATS2Q9NRM7 1088 aa10.9□□□□□ -0.66
COL4A6-203ENST00000394872 NAGPAQ9UK23 515 aa10.9□□□□□ -0.66
COL4A6-203ENST00000394872 RNF17Q9BXT8 1623 aaKnown RBP10.9□□□□□ -0.66
COL4A6-203ENST00000394872 C5orf58C9J3I9 102 aa10.9□□□□□ -0.66
COL4A6-203ENST00000394872 NTSR2O95665 410 aa10.9□□□□□ -0.66
COL4A6-203ENST00000394872 HLA-DRAP01903 254 aa10.9□□□□□ -0.66
COL4A6-203ENST00000394872 EZH2Q15910 746 aaKnown RBP10.9□□□□□ -0.66
COL4A6-203ENST00000394872 ALG13Q9NP73 1137 aaKnown RBP10.9□□□□□ -0.66
COL4A6-203ENST00000394872 RAB6BQ9NRW1 208 aa10.9□□□□□ -0.66
COL4A6-203ENST00000394872 LIMA1Q9UHB6 759 aaKnown RBP10.9□□□□□ -0.66
COL4A6-203ENST00000394872 AMACRQ9UHK6 382 aa10.9□□□□□ -0.66
COL4A6-203ENST00000394872 ZNF609O15014 1411 aa10.9□□□□□ -0.66
COL4A6-203ENST00000394872 MAFGO15525 162 aa10.9□□□□□ -0.66
COL4A6-203ENST00000394872 WEE2P0C1S8 567 aa10.9□□□□□ -0.66
COL4A6-203ENST00000394872 CUL3Q13618 768 aa10.9□□□□□ -0.66
COL4A6-203ENST00000394872 TAAR1Q96RJ0 339 aa10.9□□□□□ -0.66
COL4A6-203ENST00000394872 JMJD4Q9H9V9 463 aa10.9□□□□□ -0.66
COL4A6-203ENST00000394872 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms